| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is pssA [H]
Identifier: 17546792
GI number: 17546792
Start: 2246579
End: 2247454
Strand: Reverse
Name: pssA [H]
Synonym: RSc2073
Alternate gene names: 17546792
Gene position: 2247454-2246579 (Counterclockwise)
Preceding gene: 17546793
Following gene: 17546791
Centisome position: 60.47
GC content: 68.49
Gene sequence:
>876_bases ATGCCCGCGTTCAACCGGCGCAAGAAGCGCTTTACCGCCAGCAACGTGATGCACCTGCGTCCGTTGCGCCACAACCAGCC GCGCTCGGACGACGACGAGCTGGAGGTCGTGCGTCCGCGCCGGCGCGGCATCTACCTGCTGCCCAACGCCTTCACGACGG CCGCGCTGTTCGCCGGCTTCTTCGCCATCGTCCAGGCGATGAACCTGAACTTCGAGACCGCCGCCATCGCCATCTTCGCG GCCATGGTGCTCGACGGCATGGACGGCCGCGTCGCCCGCATCACCAACACGCAGAGCGCCTTCGGCGAGCAGTACGACTC GCTGTCCGACATGTGTTCCTTCGGCGTGGCGCCGGCGCTGGTGATGTACGAATGGATCCTGCGCGATCTGGGCAAGTGGG GCTGGCTGGCGGCCTTCGTCTATTGCGCGGGCGCCGCGCTGCGGCTGGCGCGCTTCAACACCAACATCGGCGTGGTCGAC AAGCGCTTCTTCCAGGGCATGCCGAGCCCCGCTGCCGCGGCATTGATCGCCGGCTTCGTCTGGCTGGCGATCGACAACAA GCTGCCGGTCAAGGAGCTGTGGATGCCGTGGGTCGCCTTCGGGCTGACGCTGTACGCGGGGCTGTCGATGGTGTCGAACG CGCCGTTCTACAGCGGCAAGGCGCTGGACGTGCGGCACCGGGTGCCGTTCGGCGTGATGGTGCTCGTGCTGGTGCTGTTC GTGGTGGTGTCGAGCGACCCGCCGGTGGCGCTGTTCGGGTTGTTCGTCGTCTACGCGGTGTCGGGCTACGTGCTGTGGGG CTGGCGTGCGCTGCACGGTCGGCCGGGCAGCCCGCGCCTGCCGCGCGAGCCCGTGCCGGCAGATGCCGACGAGTGA
Upstream 100 bases:
>100_bases GTGTACCTGCCGCTCACGGCGCGCCCGCGCGTGACCATCGGCGAGAAGGTGTCCGCCACGCTGACGGTGCTCGCCGAGCT GGACTGACCCGGAGGCCATC
Downstream 100 bases:
>100_bases TCGATCGGCGCCTTCGTGCGCGGCACCCTAGGTTTCTGCTTGCGCGCTTGCGCCGGTTTTTGAATTCGTCTATAGTCGTC CGCATGCTTTCGCGCCCGAT
Product: CDP-diacylglycerol--serine O-phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylserine synthase [H]
Number of amino acids: Translated: 291; Mature: 290
Protein sequence:
>291_residues MPAFNRRKKRFTASNVMHLRPLRHNQPRSDDDELEVVRPRRRGIYLLPNAFTTAALFAGFFAIVQAMNLNFETAAIAIFA AMVLDGMDGRVARITNTQSAFGEQYDSLSDMCSFGVAPALVMYEWILRDLGKWGWLAAFVYCAGAALRLARFNTNIGVVD KRFFQGMPSPAAAALIAGFVWLAIDNKLPVKELWMPWVAFGLTLYAGLSMVSNAPFYSGKALDVRHRVPFGVMVLVLVLF VVVSSDPPVALFGLFVVYAVSGYVLWGWRALHGRPGSPRLPREPVPADADE
Sequences:
>Translated_291_residues MPAFNRRKKRFTASNVMHLRPLRHNQPRSDDDELEVVRPRRRGIYLLPNAFTTAALFAGFFAIVQAMNLNFETAAIAIFA AMVLDGMDGRVARITNTQSAFGEQYDSLSDMCSFGVAPALVMYEWILRDLGKWGWLAAFVYCAGAALRLARFNTNIGVVD KRFFQGMPSPAAAALIAGFVWLAIDNKLPVKELWMPWVAFGLTLYAGLSMVSNAPFYSGKALDVRHRVPFGVMVLVLVLF VVVSSDPPVALFGLFVVYAVSGYVLWGWRALHGRPGSPRLPREPVPADADE >Mature_290_residues PAFNRRKKRFTASNVMHLRPLRHNQPRSDDDELEVVRPRRRGIYLLPNAFTTAALFAGFFAIVQAMNLNFETAAIAIFAA MVLDGMDGRVARITNTQSAFGEQYDSLSDMCSFGVAPALVMYEWILRDLGKWGWLAAFVYCAGAALRLARFNTNIGVVDK RFFQGMPSPAAAALIAGFVWLAIDNKLPVKELWMPWVAFGLTLYAGLSMVSNAPFYSGKALDVRHRVPFGVMVLVLVLFV VVSSDPPVALFGLFVVYAVSGYVLWGWRALHGRPGSPRLPREPVPADADE
Specific function: Unknown
COG id: COG1183
COG function: function code I; Phosphatidylserine synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320864, Length=167, Percent_Identity=31.7365269461078, Blast_Score=81, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004533 - InterPro: IPR000462 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.8 [H]
Molecular weight: Translated: 32248; Mature: 32117
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAFNRRKKRFTASNVMHLRPLRHNQPRSDDDELEVVRPRRRGIYLLPNAFTTAALFAGF CCCCCHHHHHHHHHCHHEECCCCCCCCCCCCCHHHHCCCCCCCEEECCCHHHHHHHHHHH FAIVQAMNLNFETAAIAIFAAMVLDGMDGRVARITNTQSAFGEQYDSLSDMCSFGVAPAL HHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCHHHHH VMYEWILRDLGKWGWLAAFVYCAGAALRLARFNTNIGVVDKRFFQGMPSPAAAALIAGFV HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHHHHH WLAIDNKLPVKELWMPWVAFGLTLYAGLSMVSNAPFYSGKALDVRHRVPFGVMVLVLVLF HHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHH VVVSSDPPVALFGLFVVYAVSGYVLWGWRALHGRPGSPRLPREPVPADADE HHHCCCCCHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PAFNRRKKRFTASNVMHLRPLRHNQPRSDDDELEVVRPRRRGIYLLPNAFTTAALFAGF CCCCHHHHHHHHHCHHEECCCCCCCCCCCCCHHHHCCCCCCCEEECCCHHHHHHHHHHH FAIVQAMNLNFETAAIAIFAAMVLDGMDGRVARITNTQSAFGEQYDSLSDMCSFGVAPAL HHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCHHHHH VMYEWILRDLGKWGWLAAFVYCAGAALRLARFNTNIGVVDKRFFQGMPSPAAAALIAGFV HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHHHHH WLAIDNKLPVKELWMPWVAFGLTLYAGLSMVSNAPFYSGKALDVRHRVPFGVMVLVLVLF HHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHH VVVSSDPPVALFGLFVVYAVSGYVLWGWRALHGRPGSPRLPREPVPADADE HHHCCCCCHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]