| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
Click here to switch to the map view.
The map label for this gene is livK [C]
Identifier: 17546789
GI number: 17546789
Start: 2242576
End: 2243832
Strand: Reverse
Name: livK [C]
Synonym: RSc2070
Alternate gene names: 17546789
Gene position: 2243832-2242576 (Counterclockwise)
Preceding gene: 17546791
Following gene: 17546788
Centisome position: 60.38
GC content: 69.53
Gene sequence:
>1257_bases ATGTTTCGTCTGTTGATGGCTGCGCTGGCGGCCATGGGGCTGTGTGGCGCCGCCGGCGCCCAGCCCGCGGTCGCGCCGAT CCGGCTGGCATTGATCGAGGGCCTGTCCGGCCCGTTCGCCAACGCGGGCGAGGCAGTGGACCGCAACCTGCGCATCGCCA TCGAGGGCGTGAACGCGCGCGGCGGAGTCCGGTTGCCGGACGGGCGCCATCCGCTCGCCCTGGTGCGGTTCGACAGCAAG AACATGGTCGATGAGTCCCTGCTGCAGCTGCAGGCGGCCAGCGATGCGGGCATCCGCTTTGTCCTGCAGGGCAACAGCTC GGCGGCCGCGGCGGCGCTTTCGGCGTCGATCGCGCGCCACAACGATCGCGCTCCGGACGCGCGCATGCTGTTCCTCAACT ACGCCGCCGTCGATCCGGCGCTGACCAACGAGGCCTGCAGCTTCTGGCATTTCCGCTTCGACGCCTCGGCCGACATGCGC ATGCATGCGCTGACCGAAGTGATCCGCGCCGATCCGTCCGTCAAGCAGGTCTACCTGATTGGCCAGGACTACACCTTCGG CCGGCAGGTGGCGCAGCTGGCGCGCCGGCAACTGGGCGAGAAGCGGCCGGACATCGCCATCGCCGGCGAGGTGCTGCATC CGATCGGCAAGGTGAAGGATTTCGCGCCCTACGTGGCCCGCATCGCGGCGTCGGGCGCCGATGCCGTCATCACGGGCAAC TGGGGCAATGACCTGACGCTGCTGGTCAAGGCGGCGCGCGATGCCGGCCTGAAAGCCCGCTTTTTCACCTTCTACGGCAA TTCGCTCGGTGCCCCGGGCGCGATGGGCGAGGCGGGTGTCGGCCGGGTCGTGGCGGTGGCGGAGTGGCACCCGAACCTGG GCGGGACGGGGTCCGACGCGTTCTACAAGGCGTTCCGCGCGCGTTACCCGGCGCCGGTGGACGACTATCCGCTGCTGCGC GACCAGATGATGATCGACCTGCTGGCCACCGCCATCGAGCGTGCCGGCACGACCGAAGCCGGCGCGGTCGCGCGTGCGCT GGAAGGCGCTTCGCTCGACACCGGCTTCCATCGCCTCACGCTGCGGGCCGAGGATCACCAGGCCATCCAGCCGCTGGTCG TCATGCAGATGGCGCGCGCGGGCACGCCGGGCGCGCCGTTCGATATCGAGGGATCCGGCTACGGTTTCCGGACGCTGAAA GTGATTCCTCCAGCCCAAACGGCTCTGCCCACCACGTGCCGGATGGCGCGCTATTGA
Upstream 100 bases:
>100_bases CATGATGCGGCCTCCTGCAATGCCTTGAGTGTAGGGCGGAACGCGGCTTGTGCCGGCGCGGCGCCACGCCTTACCATCCG CTCCTCACGGGGAGTTCCAT
Downstream 100 bases:
>100_bases GGCAATCCGTCTCGGTGCTGTCATCGGGCGGAGGAATTGGGCTATAATCGCGCCCTTGTCATTCGGCCGGGCATCCGGTT GGGCTGACAAGATTGTGTTC
Product: transporter signal peptide protein
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MFRLLMAALAAMGLCGAAGAQPAVAPIRLALIEGLSGPFANAGEAVDRNLRIAIEGVNARGGVRLPDGRHPLALVRFDSK NMVDESLLQLQAASDAGIRFVLQGNSSAAAAALSASIARHNDRAPDARMLFLNYAAVDPALTNEACSFWHFRFDASADMR MHALTEVIRADPSVKQVYLIGQDYTFGRQVAQLARRQLGEKRPDIAIAGEVLHPIGKVKDFAPYVARIAASGADAVITGN WGNDLTLLVKAARDAGLKARFFTFYGNSLGAPGAMGEAGVGRVVAVAEWHPNLGGTGSDAFYKAFRARYPAPVDDYPLLR DQMMIDLLATAIERAGTTEAGAVARALEGASLDTGFHRLTLRAEDHQAIQPLVVMQMARAGTPGAPFDIEGSGYGFRTLK VIPPAQTALPTTCRMARY
Sequences:
>Translated_418_residues MFRLLMAALAAMGLCGAAGAQPAVAPIRLALIEGLSGPFANAGEAVDRNLRIAIEGVNARGGVRLPDGRHPLALVRFDSK NMVDESLLQLQAASDAGIRFVLQGNSSAAAAALSASIARHNDRAPDARMLFLNYAAVDPALTNEACSFWHFRFDASADMR MHALTEVIRADPSVKQVYLIGQDYTFGRQVAQLARRQLGEKRPDIAIAGEVLHPIGKVKDFAPYVARIAASGADAVITGN WGNDLTLLVKAARDAGLKARFFTFYGNSLGAPGAMGEAGVGRVVAVAEWHPNLGGTGSDAFYKAFRARYPAPVDDYPLLR DQMMIDLLATAIERAGTTEAGAVARALEGASLDTGFHRLTLRAEDHQAIQPLVVMQMARAGTPGAPFDIEGSGYGFRTLK VIPPAQTALPTTCRMARY >Mature_418_residues MFRLLMAALAAMGLCGAAGAQPAVAPIRLALIEGLSGPFANAGEAVDRNLRIAIEGVNARGGVRLPDGRHPLALVRFDSK NMVDESLLQLQAASDAGIRFVLQGNSSAAAAALSASIARHNDRAPDARMLFLNYAAVDPALTNEACSFWHFRFDASADMR MHALTEVIRADPSVKQVYLIGQDYTFGRQVAQLARRQLGEKRPDIAIAGEVLHPIGKVKDFAPYVARIAASGADAVITGN WGNDLTLLVKAARDAGLKARFFTFYGNSLGAPGAMGEAGVGRVVAVAEWHPNLGGTGSDAFYKAFRARYPAPVDDYPLLR DQMMIDLLATAIERAGTTEAGAVARALEGASLDTGFHRLTLRAEDHQAIQPLVVMQMARAGTPGAPFDIEGSGYGFRTLK VIPPAQTALPTTCRMARY
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
None
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000709 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44469; Mature: 44469
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRLLMAALAAMGLCGAAGAQPAVAPIRLALIEGLSGPFANAGEAVDRNLRIAIEGVNAR CHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHCCCEEEEEEECCCC GGVRLPDGRHPLALVRFDSKNMVDESLLQLQAASDAGIRFVLQGNSSAAAAALSASIARH CCEECCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHC NDRAPDARMLFLNYAAVDPALTNEACSFWHFRFDASADMRMHALTEVIRADPSVKQVYLI CCCCCCCEEEEEEHHHCCCHHHHCHHHEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEE GQDYTFGRQVAQLARRQLGEKRPDIAIAGEVLHPIGKVKDFAPYVARIAASGADAVITGN ECCCHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC WGNDLTLLVKAARDAGLKARFFTFYGNSLGAPGAMGEAGVGRVVAVAEWHPNLGGTGSDA CCCCEEEEEEEHHCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHH FYKAFRARYPAPVDDYPLLRDQMMIDLLATAIERAGTTEAGAVARALEGASLDTGFHRLT HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEEEE LRAEDHQAIQPLVVMQMARAGTPGAPFDIEGSGYGFRTLKVIPPAQTALPTTCRMARY EEECCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCEEEEEEECCCCCCCCCHHHHCCC >Mature Secondary Structure MFRLLMAALAAMGLCGAAGAQPAVAPIRLALIEGLSGPFANAGEAVDRNLRIAIEGVNAR CHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHCCCEEEEEEECCCC GGVRLPDGRHPLALVRFDSKNMVDESLLQLQAASDAGIRFVLQGNSSAAAAALSASIARH CCEECCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHC NDRAPDARMLFLNYAAVDPALTNEACSFWHFRFDASADMRMHALTEVIRADPSVKQVYLI CCCCCCCEEEEEEHHHCCCHHHHCHHHEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEE GQDYTFGRQVAQLARRQLGEKRPDIAIAGEVLHPIGKVKDFAPYVARIAASGADAVITGN ECCCHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC WGNDLTLLVKAARDAGLKARFFTFYGNSLGAPGAMGEAGVGRVVAVAEWHPNLGGTGSDA CCCCEEEEEEEHHCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHH FYKAFRARYPAPVDDYPLLRDQMMIDLLATAIERAGTTEAGAVARALEGASLDTGFHRLT HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEEEE LRAEDHQAIQPLVVMQMARAGTPGAPFDIEGSGYGFRTLKVIPPAQTALPTTCRMARY EEECCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCEEEEEEECCCCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA