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The map label for this gene is nuoJ [H]

Identifier: 17546772

GI number: 17546772

Start: 2226581

End: 2227213

Strand: Reverse

Name: nuoJ [H]

Synonym: RSc2053

Alternate gene names: 17546772

Gene position: 2227213-2226581 (Counterclockwise)

Preceding gene: 17546773

Following gene: 17546771

Centisome position: 59.93

GC content: 64.61

Gene sequence:

>633_bases
ATGGAAATCACGACGATCATCTTCTACTGTTTCTCGCTGGTGCTGGTGCTGTCGGCGCTGAAGGTCATCACCGCGAAGAA
CCCGGTGCACGCGGCGCTGTTCCTCGTGCTGTCGTTCTTCACGGCGGCGGCGATCTGGATGCTGCTGAAGGCGGAGTTCC
TCGCCATCACGCTGGTGCTGGTCTACGTGGGCGCGGTGATGGTGCTGTTCCTGTTCGTGGTGATGATGATCGATGTCGAC
ATCGAGCATCTGCGGCGCGATTTCTGGACTTACGTGCCGATGGGTGCGTTCGTGGGGGCTGTCATCATCATGGAAATGGC
CGTGGTCCTGACCAAGGCCTTCATGGGGCGCTCGCAGCCGGTGCAGGAGTTGCCCAAGGCGCTGTCGGGCCCCAACACCC
AGGCGCTCGGCAAGCTGATCTACACCGACTACATCTATGCGTTTGAAGTCGCCGGCGCGGTGCTGCTGCTGGCGATCGTG
GCCGCCGTGGCGCTGACCGCCCGCCGCCGCAAGGACAGCAAGGCCCAGAACGTGGCCGACCAGATCCGCGTGCAGCGCAA
GGACCGCGTCCGCCTGGTCTCGATGCCGGCGGAGAAGGCCGCGTCCGCGGCCCCGGCCGAGACCAACCGCTGA

Upstream 100 bases:

>100_bases
CGGTTGGACAACGGCTCCTCGTGAGCCAGCCAGTTGCGGCGGTATCATGCCGCCGCGGCTTTGGATGAGCGCGTGCCGCA
AAACGGCCCGCGTCAGGATC

Downstream 100 bases:

>100_bases
GCCCCGGGAGAATCCACATGCTATCGCTCGCCCATTACCTCGTGCTCGGCGCCGTCCTGTTCGCCATCAGCATCGTCGGC
ATCTTCCTGAACCGCAAGAA

Product: NADH dehydrogenase subunit J

Products: NA

Alternate protein names: NADH dehydrogenase I subunit J; NDH-1 subunit J [H]

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MEITTIIFYCFSLVLVLSALKVITAKNPVHAALFLVLSFFTAAAIWMLLKAEFLAITLVLVYVGAVMVLFLFVVMMIDVD
IEHLRRDFWTYVPMGAFVGAVIIMEMAVVLTKAFMGRSQPVQELPKALSGPNTQALGKLIYTDYIYAFEVAGAVLLLAIV
AAVALTARRRKDSKAQNVADQIRVQRKDRVRLVSMPAEKAASAAPAETNR

Sequences:

>Translated_210_residues
MEITTIIFYCFSLVLVLSALKVITAKNPVHAALFLVLSFFTAAAIWMLLKAEFLAITLVLVYVGAVMVLFLFVVMMIDVD
IEHLRRDFWTYVPMGAFVGAVIIMEMAVVLTKAFMGRSQPVQELPKALSGPNTQALGKLIYTDYIYAFEVAGAVLLLAIV
AAVALTARRRKDSKAQNVADQIRVQRKDRVRLVSMPAEKAASAAPAETNR
>Mature_210_residues
MEITTIIFYCFSLVLVLSALKVITAKNPVHAALFLVLSFFTAAAIWMLLKAEFLAITLVLVYVGAVMVLFLFVVMMIDVD
IEHLRRDFWTYVPMGAFVGAVIIMEMAVVLTKAFMGRSQPVQELPKALSGPNTQALGKLIYTDYIYAFEVAGAVLLLAIV
AAVALTARRRKDSKAQNVADQIRVQRKDRVRLVSMPAEKAASAAPAETNR

Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat

COG id: COG0839

COG function: function code C; NADH:ubiquinone oxidoreductase subunit 6 (chain J)

Gene ontology:

Cell location: Cellular chromatophore membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I subunit 6 family [H]

Homologues:

Organism=Escherichia coli, GI1788616, Length=186, Percent_Identity=32.258064516129, Blast_Score=82, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001457 [H]

Pfam domain/function: PF00499 Oxidored_q3 [H]

EC number: =1.6.99.5 [H]

Molecular weight: Translated: 23141; Mature: 23141

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEITTIIFYCFSLVLVLSALKVITAKNPVHAALFLVLSFFTAAAIWMLLKAEFLAITLVL
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYVGAVMVLFLFVVMMIDVDIEHLRRDFWTYVPMGAFVGAVIIMEMAVVLTKAFMGRSQP
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
VQELPKALSGPNTQALGKLIYTDYIYAFEVAGAVLLLAIVAAVALTARRRKDSKAQNVAD
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QIRVQRKDRVRLVSMPAEKAASAAPAETNR
HHHHHHHHHHHHHCCCHHHHHCCCCCCCCC
>Mature Secondary Structure
MEITTIIFYCFSLVLVLSALKVITAKNPVHAALFLVLSFFTAAAIWMLLKAEFLAITLVL
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYVGAVMVLFLFVVMMIDVDIEHLRRDFWTYVPMGAFVGAVIIMEMAVVLTKAFMGRSQP
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
VQELPKALSGPNTQALGKLIYTDYIYAFEVAGAVLLLAIVAAVALTARRRKDSKAQNVAD
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QIRVQRKDRVRLVSMPAEKAASAAPAETNR
HHHHHHHHHHHHHCCCHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8566820 [H]