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The map label for this gene is sdhC [C]

Identifier: 17546715

GI number: 17546715

Start: 2172967

End: 2173389

Strand: Reverse

Name: sdhC [C]

Synonym: RSc1996

Alternate gene names: 17546715

Gene position: 2173389-2172967 (Counterclockwise)

Preceding gene: 17546716

Following gene: 17546714

Centisome position: 58.48

GC content: 60.52

Gene sequence:

>423_bases
ATGGGGTCTGACATGGCAGAAGCCATCAAGAAAGCCAGGCCGGAATTCAGGAACATCGGTCTGGGGGATATCGCCCGCTA
CCGGTTGCCCTGGGCCGGCAAGGTGTCCATCCTGCATCGCGCCAGCGGTGCGCTGATGTTCCTTCTTCTTCCGTTCGTGC
TGTACCTGTTCGAGCAGAGTCTCACGTCGGAAATCAGTTTCGCCAAGTTCACGGCGCTTCTGTCCAACGGCTTCGCCAAG
GTTGTCGTCCTCGCGCTCATCTGGGCCTACCTGCACCACTTCTGCGCCGGCATCCGCTACCTGATCCTCGACCTGCACAT
CGGCATCGACAAGACCACGTCGTCCAAGTCGGCCGTGAGCGTGCTGATCGTCAGCCTGCTGCTGACCGTCGTGTTCGGCG
CCAAGCTGTTCGGCCTGTTCTGA

Upstream 100 bases:

>100_bases
AAGTGGCGCGCGGCGCGGGAAATTATTGGTGCGCTGCGCAACAAAAGCGCGCTAAAATCGCGTGGATTTGCATAAGCAGT
TTCGTTTGTCGTTTTAGCCA

Downstream 100 bases:

>100_bases
GGAGTCCCCGATGGCACAAAACAATATCGGTCCCAAGCGCCTCGTCGTCGGCGCACACTACGGCCTGAAGGACTTCCTCG
CGCAGCGCGTCACCGCCGTG

Product: transmembrane succinate dehydrogenase (cytochrome B-556 subunit) oxidoreductase

Products: fumarate; reduced acceptor

Alternate protein names: Succinate Dehydrogenase Cytochrome B Subunit; Succinate Dehydrogenase Subunit C; Succinate Dehydrogenase; Succinate Dehydrogenase Hydrophobic Subunit Cytochrome

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MGSDMAEAIKKARPEFRNIGLGDIARYRLPWAGKVSILHRASGALMFLLLPFVLYLFEQSLTSEISFAKFTALLSNGFAK
VVVLALIWAYLHHFCAGIRYLILDLHIGIDKTTSSKSAVSVLIVSLLLTVVFGAKLFGLF

Sequences:

>Translated_140_residues
MGSDMAEAIKKARPEFRNIGLGDIARYRLPWAGKVSILHRASGALMFLLLPFVLYLFEQSLTSEISFAKFTALLSNGFAK
VVVLALIWAYLHHFCAGIRYLILDLHIGIDKTTSSKSAVSVLIVSLLLTVVFGAKLFGLF
>Mature_139_residues
GSDMAEAIKKARPEFRNIGLGDIARYRLPWAGKVSILHRASGALMFLLLPFVLYLFEQSLTSEISFAKFTALLSNGFAKV
VVLALIWAYLHHFCAGIRYLILDLHIGIDKTTSSKSAVSVLIVSLLLTVVFGAKLFGLF

Specific function: Mono-Heme Cytochrome Of The Succinate Dehydrogenase Complex. [C]

COG id: COG2009

COG function: function code C; Succinate dehydrogenase/fumarate reductase, cytochrome b subunit

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.3.99.1

Molecular weight: Translated: 15434; Mature: 15302

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSDMAEAIKKARPEFRNIGLGDIARYRLPWAGKVSILHRASGALMFLLLPFVLYLFEQS
CCCHHHHHHHHHCHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTSEISFAKFTALLSNGFAKVVVLALIWAYLHHFCAGIRYLILDLHIGIDKTTSSKSAVS
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
VLIVSLLLTVVFGAKLFGLF
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GSDMAEAIKKARPEFRNIGLGDIARYRLPWAGKVSILHRASGALMFLLLPFVLYLFEQS
CCHHHHHHHHHCHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTSEISFAKFTALLSNGFAKVVVLALIWAYLHHFCAGIRYLILDLHIGIDKTTSSKSAVS
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
VLIVSLLLTVVFGAKLFGLF
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: succinate; acceptor

Specific reaction: succinate + acceptor = fumarate + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA