Click here to switch to the map view.

The map label for this gene is osmB1

Identifier: 17546692

GI number: 17546692

Start: 2148013

End: 2148213

Strand: Direct

Name: osmB1

Synonym: RSc1973

Alternate gene names: NA

Gene position: 2148013-2148213 (Clockwise)

Preceding gene: 17546685

Following gene: 17546693

Centisome position: 57.8

GC content: 69.15

Gene sequence:

>201_bases
ATGCGTGCCTTCGTATCCCTCATTCTGGCGGCCGCGCTCGCATCCGTCAGCGGATGCGCGGACATGACACCCAAGCAGCG
CAATACCGCGCTCGGCGCAGCCGCAGGTGGCGTCGCCGGGGCTGCCATCTGGGGCGGTCCGGGCGCGACGCTGGGTGGCG
CCGCACTGGGTGGCGTGATCGGTAACGTCGTCACAAAGTAG

Upstream 100 bases:

>100_bases
GCATGTCGGAATCGGCTGACAACCTTTTCAGGCATCGCCGGCTGCACATCGCGCGCCGCAGCGCCTTGAATGGAAGTATG
CGAACAACAAGGAGTTTGCT

Downstream 100 bases:

>100_bases
GTCGCCATACGCAGCCGCTGTGCGCTGCGGGATCGGGGCCAGGCAACGCTGCCTGGCCCTTTTTGTTGACTGAGCGCGCC
GATTCCCTGCACGCGTCCCG

Product: osmotically inducible lipoprotein B1 transmembrane

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 66; Mature: 66

Protein sequence:

>66_residues
MRAFVSLILAAALASVSGCADMTPKQRNTALGAAAGGVAGAAIWGGPGATLGGAALGGVIGNVVTK

Sequences:

>Translated_66_residues
MRAFVSLILAAALASVSGCADMTPKQRNTALGAAAGGVAGAAIWGGPGATLGGAALGGVIGNVVTK
>Mature_66_residues
MRAFVSLILAAALASVSGCADMTPKQRNTALGAAAGGVAGAAIWGGPGATLGGAALGGVIGNVVTK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6109; Mature: 6109

Theoretical pI: Translated: 10.78; Mature: 10.78

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAFVSLILAAALASVSGCADMTPKQRNTALGAAAGGVAGAAIWGGPGATLGGAALGGVI
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHEECCCCCCHHHHHHHHHH
GNVVTK
HHHHCC
>Mature Secondary Structure
MRAFVSLILAAALASVSGCADMTPKQRNTALGAAAGGVAGAAIWGGPGATLGGAALGGVI
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHEECCCCCCHHHHHHHHHH
GNVVTK
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA