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The map label for this gene is 17546663

Identifier: 17546663

GI number: 17546663

Start: 2118715

End: 2121312

Strand: Reverse

Name: 17546663

Synonym: RSc1944

Alternate gene names: NA

Gene position: 2121312-2118715 (Counterclockwise)

Preceding gene: 17546664

Following gene: 17546662

Centisome position: 57.08

GC content: 66.86

Gene sequence:

>2598_bases
TTGTTGGGCCTGTCGTTCCCAAAGGACGACGCTCCCACGGCGACTGACCCACGGGGCCGGTCGTTCCCCGTGCAGATGGT
GGTCGAGCGCCTGGAGGCTCAGGAGGGCCTGGGCCAGGACTTTCGGTTCGAGTTGACGCTATTGGCCGACCACGCCGGCC
TTGTTCTGGCGGACATGCTCGGCAAACTGCTAGCGGTGTCACTGGTCAAGCCGGACGGCACGCTGCGCTGGTTTACCGGG
CACGTGGCGGAATTCTCGTTGGTGGGCAGTGATCCCGGCGTGGCGACCTACCGGGCGGTGCTCAGGCCGTGGCTGTGGTT
CGCGCGGCAACGGGTGAACAACCGCGTGTTCAGGGACCGGACCCTGTACCAGCAGATTGCCGACATCCTGCAAGGCCACG
GAGACTGGGCGCTGTGGCAATGGGACGTAAGCGGCGACGATGTGCCGTTCACCATGGCCGTGCAGGGCGGCGGCGAGGGT
GAGAGCGAGCACAATTACATCCACCGACGCCTGGAAGCGCGGGGCTGGACCTACTACTACAAACACGACGCGACCGGCCA
CCAGCTGGTCATCATCGACAGCAACAGCCAGTGCCCGCCGGTGGACGGGAACGACCCCCGCATTCCCTTCCAGGCCGAGG
GCGGGCCGCAGGAGGAGAACGCCATCCAGCGCTGGACGCCAGTGCAGACTGCCGTGGCCGCGCTGTTCGCGGCGAGCGCG
TTCGACTTCAAGCGCCCGCAGGCACGGCACCATACCGAATCGACGCAGCGCAAGCAGGGCCGCGTTCCGGAGCTGGAGAC
GCACGAATACGTGGGGCACTACGGCTTCCGGAAGGAAGACCCCACGGGCGCAGCGCTGCTGAACCTGCGCAGAGAGGAAA
TCGAAGCGCATGCGCAGCAGTACCAAGCCGAGGGCAACAACAGCAGCGTGGTTTGCGGCGGCTGGTTTTATCTGTTCGGG
CACTTCAGCAACACCGAGCGCGAGGAGGACAGCCAATATCTGATCGTGGCGGCAAGCCACAGCGCGAGCAACAACTACCC
AGCCGAACTGGGCCGGCAGGGCGGCCACACGGCGGAGCCGCTTCCCGGCCGCAAGGGCGAATACCGCAACCGCTTCACCG
CGATCAAGCGCGCCGTGCCCTGGCGCCCCGGCCGGGGACGGAACAGCGTCGAAGTGAAGGTGGATGGGCACCAGACGGCC
AGGGTAGTCGGCCGCGATGGTCTGGGTGCGGTGGACGTGGACGAACACGGCCGCATCCTGATCCAGTTCCACTGGGACCG
GGAAGGCAAGCACAGCGCGCGCGTGCGGGTGGCGAGCAACTGGGCGGGCGGTGAAACTGGCATGGTGTCGTGGCCACGCG
TGGGCAGCGAAGTGCTGGTGGTCGCGTTGGACGGCAACCCCGACCACTTCCTGGTCATCGGCGTTGTCCACAATGCCCAG
CGCATGCCGCCGTGGCAATTGCCGACGCAGGGGGTGCTGATGGGCATCCGCAGCCGGGAACTGACCCCGGACGGCGGCAA
CGATCCCGGCGGCCGTAGCAACCTCTTAGCCCTGGACGACACCGCAGGCAGGATCCAGGCGCAGCTGAAGAGCGACCACC
TGAACAGTTCGCTGAGCCTGGGGCACATTACGCGGATCGACGGCACGGCAGGCCGGCAGAATCCACGCGGCCAGGGCTAT
GCGCTGGATACCGAGGGGCACGGCGTGAACCGTGCCGCCGCCGGCTTGCAGCTCACCACCGAAGCCTTGCCTGCCGGGCA
GCGCCACATGATGGATGTGGGCGAGCCGGTGGCGCGGCTGACGGTGGCGCACGACATGCACGAGCGCTTGTCGGAGGCGG
CGCGCACAGCCGGGGCGCAGCAGGCAGACGACCAGGACGAAGTGGCCCGCAGCCTGAAGCAGCAGAATGCCGACCTGAAG
GGCAGCGGCGGCGACCCGGCGCAAGGGCGGTTCCCCGAGTTCCAGCAGCCACACCTGATGCTGGCCAGCCCGGCCGGGAT
CGAGAGCAGCACGGCGGGCAGCACGCATCAGCAGAGCAACGCACACCACGCGATCACCAGCGGCGGGCACGCCAGCATTG
CCACCGGGCGCAGCTTCCTCGCCAGTGCCAAGGATGCGATCCGGCTGTTTGCCTACCGGCTCGGTTTGAAGCTGGTGGCC
GCGAGCGGCGACATCGACATGCAAGCGCTCAAAAACGGCATCAACATCCTGGCGAAGCTGGAGATCAAGATGGAGGGCAA
GCGGGTGGACATCAACGGAACGGATAGCGTGCGCATCAACGGGGGCGGCAGCTATATCGACGTGAGCGCGGCGGGAATCG
TGCATGGCACCAATGGCGCTTTCCAGGTGCATGCGGGCAACCATTCGTTCGCGGGGCCGGATAGCCGGCCGGTGGTGCCA
CACGCGGTTGCGTCAGCGCTGAAGCCCGACGAACCCATGCCCGTAGTGGACGCGCTGGGCAACGTTCTGCCAGACAGCCG
CGTCATCGTTCGGCCCGGCCAGAACGAAACGCGCATGGGCATTGATGGAGGAAAGATCGATCCTGAGACAGCACTCAATC
AACACGTGCTCCGACGCTGGCGCCCCCGGCGAGGTTGA

Upstream 100 bases:

>100_bases
GTTCTCGCTTGTTGCCAACATTCCGAGAAGTGAGAGCATGGCCGAATCCGACCGAACGGCACATCTGCACGACATCCTCT
TTTTCCAACAGAGCAAGCGC

Downstream 100 bases:

>100_bases
GCACGTGCGCATTCATTCAGAACCACTCAAGGAGGTATCGTTGACGCACGAGAATCGTCCTCTTTCACTGCGCCGAAGTG
TCGCCGTGCGCAGCACGTTG

Product: VGR-related protein

Products: NA

Alternate protein names: Type VI Secretion System Vgr Family Protein; VGR-Related Protein; Rhs Element Vgr Family Protein; Vgr-Related Protein; Rhs-Family Protein; Rhs Element Vgr Family; Rhs Family Protein; VGR-Like Protein; Vgr Related Protein; Rhs Element Vgr Related Protein; Replication/Virulence Associated Protein; Conserved Hypothethical Protein; VGR-Related Type VI Secretion System Protein; Rhs Element Vgr ProteinGp5-Like; Type VI Secretion System VgrG Family Protein; Rhs Element Vgr Protein Subfamily; Type VI Secretion System Effector Protein VgrS; VgrG Protein; Rhs Element Vgr-Related Protein; VgrG Family T6SS G

Number of amino acids: Translated: 865; Mature: 865

Protein sequence:

>865_residues
MLGLSFPKDDAPTATDPRGRSFPVQMVVERLEAQEGLGQDFRFELTLLADHAGLVLADMLGKLLAVSLVKPDGTLRWFTG
HVAEFSLVGSDPGVATYRAVLRPWLWFARQRVNNRVFRDRTLYQQIADILQGHGDWALWQWDVSGDDVPFTMAVQGGGEG
ESEHNYIHRRLEARGWTYYYKHDATGHQLVIIDSNSQCPPVDGNDPRIPFQAEGGPQEENAIQRWTPVQTAVAALFAASA
FDFKRPQARHHTESTQRKQGRVPELETHEYVGHYGFRKEDPTGAALLNLRREEIEAHAQQYQAEGNNSSVVCGGWFYLFG
HFSNTEREEDSQYLIVAASHSASNNYPAELGRQGGHTAEPLPGRKGEYRNRFTAIKRAVPWRPGRGRNSVEVKVDGHQTA
RVVGRDGLGAVDVDEHGRILIQFHWDREGKHSARVRVASNWAGGETGMVSWPRVGSEVLVVALDGNPDHFLVIGVVHNAQ
RMPPWQLPTQGVLMGIRSRELTPDGGNDPGGRSNLLALDDTAGRIQAQLKSDHLNSSLSLGHITRIDGTAGRQNPRGQGY
ALDTEGHGVNRAAAGLQLTTEALPAGQRHMMDVGEPVARLTVAHDMHERLSEAARTAGAQQADDQDEVARSLKQQNADLK
GSGGDPAQGRFPEFQQPHLMLASPAGIESSTAGSTHQQSNAHHAITSGGHASIATGRSFLASAKDAIRLFAYRLGLKLVA
ASGDIDMQALKNGINILAKLEIKMEGKRVDINGTDSVRINGGGSYIDVSAAGIVHGTNGAFQVHAGNHSFAGPDSRPVVP
HAVASALKPDEPMPVVDALGNVLPDSRVIVRPGQNETRMGIDGGKIDPETALNQHVLRRWRPRRG

Sequences:

>Translated_865_residues
MLGLSFPKDDAPTATDPRGRSFPVQMVVERLEAQEGLGQDFRFELTLLADHAGLVLADMLGKLLAVSLVKPDGTLRWFTG
HVAEFSLVGSDPGVATYRAVLRPWLWFARQRVNNRVFRDRTLYQQIADILQGHGDWALWQWDVSGDDVPFTMAVQGGGEG
ESEHNYIHRRLEARGWTYYYKHDATGHQLVIIDSNSQCPPVDGNDPRIPFQAEGGPQEENAIQRWTPVQTAVAALFAASA
FDFKRPQARHHTESTQRKQGRVPELETHEYVGHYGFRKEDPTGAALLNLRREEIEAHAQQYQAEGNNSSVVCGGWFYLFG
HFSNTEREEDSQYLIVAASHSASNNYPAELGRQGGHTAEPLPGRKGEYRNRFTAIKRAVPWRPGRGRNSVEVKVDGHQTA
RVVGRDGLGAVDVDEHGRILIQFHWDREGKHSARVRVASNWAGGETGMVSWPRVGSEVLVVALDGNPDHFLVIGVVHNAQ
RMPPWQLPTQGVLMGIRSRELTPDGGNDPGGRSNLLALDDTAGRIQAQLKSDHLNSSLSLGHITRIDGTAGRQNPRGQGY
ALDTEGHGVNRAAAGLQLTTEALPAGQRHMMDVGEPVARLTVAHDMHERLSEAARTAGAQQADDQDEVARSLKQQNADLK
GSGGDPAQGRFPEFQQPHLMLASPAGIESSTAGSTHQQSNAHHAITSGGHASIATGRSFLASAKDAIRLFAYRLGLKLVA
ASGDIDMQALKNGINILAKLEIKMEGKRVDINGTDSVRINGGGSYIDVSAAGIVHGTNGAFQVHAGNHSFAGPDSRPVVP
HAVASALKPDEPMPVVDALGNVLPDSRVIVRPGQNETRMGIDGGKIDPETALNQHVLRRWRPRRG
>Mature_865_residues
MLGLSFPKDDAPTATDPRGRSFPVQMVVERLEAQEGLGQDFRFELTLLADHAGLVLADMLGKLLAVSLVKPDGTLRWFTG
HVAEFSLVGSDPGVATYRAVLRPWLWFARQRVNNRVFRDRTLYQQIADILQGHGDWALWQWDVSGDDVPFTMAVQGGGEG
ESEHNYIHRRLEARGWTYYYKHDATGHQLVIIDSNSQCPPVDGNDPRIPFQAEGGPQEENAIQRWTPVQTAVAALFAASA
FDFKRPQARHHTESTQRKQGRVPELETHEYVGHYGFRKEDPTGAALLNLRREEIEAHAQQYQAEGNNSSVVCGGWFYLFG
HFSNTEREEDSQYLIVAASHSASNNYPAELGRQGGHTAEPLPGRKGEYRNRFTAIKRAVPWRPGRGRNSVEVKVDGHQTA
RVVGRDGLGAVDVDEHGRILIQFHWDREGKHSARVRVASNWAGGETGMVSWPRVGSEVLVVALDGNPDHFLVIGVVHNAQ
RMPPWQLPTQGVLMGIRSRELTPDGGNDPGGRSNLLALDDTAGRIQAQLKSDHLNSSLSLGHITRIDGTAGRQNPRGQGY
ALDTEGHGVNRAAAGLQLTTEALPAGQRHMMDVGEPVARLTVAHDMHERLSEAARTAGAQQADDQDEVARSLKQQNADLK
GSGGDPAQGRFPEFQQPHLMLASPAGIESSTAGSTHQQSNAHHAITSGGHASIATGRSFLASAKDAIRLFAYRLGLKLVA
ASGDIDMQALKNGINILAKLEIKMEGKRVDINGTDSVRINGGGSYIDVSAAGIVHGTNGAFQVHAGNHSFAGPDSRPVVP
HAVASALKPDEPMPVVDALGNVLPDSRVIVRPGQNETRMGIDGGKIDPETALNQHVLRRWRPRRG

Specific function: Unknown

COG id: COG3501

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 94262; Mature: 94262

Theoretical pI: Translated: 6.99; Mature: 6.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGLSFPKDDAPTATDPRGRSFPVQMVVERLEAQEGLGQDFRFELTLLADHAGLVLADML
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHH
GKLLAVSLVKPDGTLRWFTGHVAEFSLVGSDPGVATYRAVLRPWLWFARQRVNNRVFRDR
HHHHEEEEECCCCCEEEEECCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLYQQIADILQGHGDWALWQWDVSGDDVPFTMAVQGGGEGESEHNYIHRRLEARGWTYYY
HHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCEEEE
KHDATGHQLVIIDSNSQCPPVDGNDPRIPFQAEGGPQEENAIQRWTPVQTAVAALFAASA
EECCCCCEEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCHHHHCCHHHHHHHHHHHHHH
FDFKRPQARHHTESTQRKQGRVPELETHEYVGHYGFRKEDPTGAALLNLRREEIEAHAQQ
HCCCCCCHHHCCHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
YQAEGNNSSVVCGGWFYLFGHFSNTEREEDSQYLIVAASHSASNNYPAELGRQGGHTAEP
HHCCCCCCEEEEEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCHHHHCCCCCCCCCC
LPGRKGEYRNRFTAIKRAVPWRPGRGRNSVEVKVDGHQTARVVGRDGLGAVDVDEHGRIL
CCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEECCCCCCEEEECCCCEEE
IQFHWDREGKHSARVRVASNWAGGETGMVSWPRVGSEVLVVALDGNPDHFLVIGVVHNAQ
EEEECCCCCCCCEEEEEEECCCCCCCCCEECCCCCCEEEEEEECCCCCEEEEEEEEECCC
RMPPWQLPTQGVLMGIRSRELTPDGGNDPGGRSNLLALDDTAGRIQAQLKSDHLNSSLSL
CCCCCCCCCHHHHEECCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCC
GHITRIDGTAGRQNPRGQGYALDTEGHGVNRAAAGLQLTTEALPAGQRHMMDVGEPVARL
CEEEEECCCCCCCCCCCCCEEECCCCCCCCHHHCCCEEEHHHCCCCHHHHHHHCCHHHHH
TVAHDMHERLSEAARTAGAQQADDQDEVARSLKQQNADLKGSGGDPAQGRFPEFQQPHLM
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEE
LASPAGIESSTAGSTHQQSNAHHAITSGGHASIATGRSFLASAKDAIRLFAYRLGLKLVA
EECCCCCCCCCCCCCCCCCCCCEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHCEEEEE
ASGDIDMQALKNGINILAKLEIKMEGKRVDINGTDSVRINGGGSYIDVSAAGIVHGTNGA
ECCCCCHHHHHCCCEEEEEEEEEECCCEEECCCCCEEEECCCCCEEEEEECEEEECCCCE
FQVHAGNHSFAGPDSRPVVPHAVASALKPDEPMPVVDALGNVLPDSRVIVRPGQNETRMG
EEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCEEC
IDGGKIDPETALNQHVLRRWRPRRG
CCCCCCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLGLSFPKDDAPTATDPRGRSFPVQMVVERLEAQEGLGQDFRFELTLLADHAGLVLADML
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHH
GKLLAVSLVKPDGTLRWFTGHVAEFSLVGSDPGVATYRAVLRPWLWFARQRVNNRVFRDR
HHHHEEEEECCCCCEEEEECCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLYQQIADILQGHGDWALWQWDVSGDDVPFTMAVQGGGEGESEHNYIHRRLEARGWTYYY
HHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCEEEE
KHDATGHQLVIIDSNSQCPPVDGNDPRIPFQAEGGPQEENAIQRWTPVQTAVAALFAASA
EECCCCCEEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCHHHHCCHHHHHHHHHHHHHH
FDFKRPQARHHTESTQRKQGRVPELETHEYVGHYGFRKEDPTGAALLNLRREEIEAHAQQ
HCCCCCCHHHCCHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
YQAEGNNSSVVCGGWFYLFGHFSNTEREEDSQYLIVAASHSASNNYPAELGRQGGHTAEP
HHCCCCCCEEEEEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCHHHHCCCCCCCCCC
LPGRKGEYRNRFTAIKRAVPWRPGRGRNSVEVKVDGHQTARVVGRDGLGAVDVDEHGRIL
CCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEECCCCCCEEEECCCCEEE
IQFHWDREGKHSARVRVASNWAGGETGMVSWPRVGSEVLVVALDGNPDHFLVIGVVHNAQ
EEEECCCCCCCCEEEEEEECCCCCCCCCEECCCCCCEEEEEEECCCCCEEEEEEEEECCC
RMPPWQLPTQGVLMGIRSRELTPDGGNDPGGRSNLLALDDTAGRIQAQLKSDHLNSSLSL
CCCCCCCCCHHHHEECCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCC
GHITRIDGTAGRQNPRGQGYALDTEGHGVNRAAAGLQLTTEALPAGQRHMMDVGEPVARL
CEEEEECCCCCCCCCCCCCEEECCCCCCCCHHHCCCEEEHHHCCCCHHHHHHHCCHHHHH
TVAHDMHERLSEAARTAGAQQADDQDEVARSLKQQNADLKGSGGDPAQGRFPEFQQPHLM
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEE
LASPAGIESSTAGSTHQQSNAHHAITSGGHASIATGRSFLASAKDAIRLFAYRLGLKLVA
EECCCCCCCCCCCCCCCCCCCCEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHCEEEEE
ASGDIDMQALKNGINILAKLEIKMEGKRVDINGTDSVRINGGGSYIDVSAAGIVHGTNGA
ECCCCCHHHHHCCCEEEEEEEEEECCCEEECCCCCEEEECCCCCEEEEEECEEEECCCCE
FQVHAGNHSFAGPDSRPVVPHAVASALKPDEPMPVVDALGNVLPDSRVIVRPGQNETRMG
EEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCEEC
IDGGKIDPETALNQHVLRRWRPRRG
CCCCCCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA