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The map label for this gene is 17546626

Identifier: 17546626

GI number: 17546626

Start: 2090747

End: 2091268

Strand: Direct

Name: 17546626

Synonym: RSc1907

Alternate gene names: NA

Gene position: 2090747-2091268 (Clockwise)

Preceding gene: 17546615

Following gene: 17546627

Centisome position: 56.26

GC content: 58.62

Gene sequence:

>522_bases
ATGCACTACATGGCAAGTATGGTACAGAAAACTGATACAGTCAACGACGATGGCTCAGAAAAGCGATCCTCCATCGGAGA
GCGTCTGAAGGAAGAGCGCGAGCGCCTGGGCTTCTCACAACCCGCGTTCGCCGCGATCGGTGGTGCTTCCAAAGGTTCTC
AACTGGCCTGGGAAAAAGGCACGGCCATGCCCAATGCGGAGTTCCTCCACGACGTCGCTCGTGTGGGGGTGGACGTGCTC
TACGTGATAACCGGGCGCCGCGATTCGGCCCTTACGTCGCCAGATGAAGAGATGGTTCTTGCCGGCTACCGCCAACTCGA
CGCACGCGGCCGAACTGGGGTTCTCGCGCTAATTGGCGGCATGCAGCCGCCAGCGGAAAAGAAGGTGAAGAAGACGCAGG
CCGAAATGGTGTTCAACGGCTCAGTCGGAGACGTAAAGAACATCAAGGGCGATTACCACGAGACCCGCCACAAAACCGTC
CCAGCAAGCAGCAAGAAGAAGCGCACGGACAAGGGCAGCTAG

Upstream 100 bases:

>100_bases
AGGCCGGCTTGTATCCGATTCTTTGAACAAACACCGCGTGGCGCCCGCTTTCTAGGGGCTGCTTGCGTGGCCATGGCGAT
ATACTTTTTTCGAGTTAGTG

Downstream 100 bases:

>100_bases
CCATTGTTCCCGGACCCCCGCCCCTCCTCTTGAGGGGCTAGTAGGCGGTGTGTCGTGTGACGTAGAGTCCCGCGCGTCTC
CACACCAGCGGCTAACAATA

Product: DNA-binding repressor transcription regulator protein

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Cro/CI Repressor Transcription Regulator; Cro/CI Family Transcriptional Regulator; Transcriptional Regulator XRE Family

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MHYMASMVQKTDTVNDDGSEKRSSIGERLKEERERLGFSQPAFAAIGGASKGSQLAWEKGTAMPNAEFLHDVARVGVDVL
YVITGRRDSALTSPDEEMVLAGYRQLDARGRTGVLALIGGMQPPAEKKVKKTQAEMVFNGSVGDVKNIKGDYHETRHKTV
PASSKKKRTDKGS

Sequences:

>Translated_173_residues
MHYMASMVQKTDTVNDDGSEKRSSIGERLKEERERLGFSQPAFAAIGGASKGSQLAWEKGTAMPNAEFLHDVARVGVDVL
YVITGRRDSALTSPDEEMVLAGYRQLDARGRTGVLALIGGMQPPAEKKVKKTQAEMVFNGSVGDVKNIKGDYHETRHKTV
PASSKKKRTDKGS
>Mature_173_residues
MHYMASMVQKTDTVNDDGSEKRSSIGERLKEERERLGFSQPAFAAIGGASKGSQLAWEKGTAMPNAEFLHDVARVGVDVL
YVITGRRDSALTSPDEEMVLAGYRQLDARGRTGVLALIGGMQPPAEKKVKKTQAEMVFNGSVGDVKNIKGDYHETRHKTV
PASSKKKRTDKGS

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18854; Mature: 18854

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHYMASMVQKTDTVNDDGSEKRSSIGERLKEERERLGFSQPAFAAIGGASKGSQLAWEKG
CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCHHCC
TAMPNAEFLHDVARVGVDVLYVITGRRDSALTSPDEEMVLAGYRQLDARGRTGVLALIGG
CCCCCHHHHHHHHHHCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECC
MQPPAEKKVKKTQAEMVFNGSVGDVKNIKGDYHETRHKTVPASSKKKRTDKGS
CCCCHHHHHHHHHHHHEECCCCCCHHHCCCHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MHYMASMVQKTDTVNDDGSEKRSSIGERLKEERERLGFSQPAFAAIGGASKGSQLAWEKG
CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCHHCC
TAMPNAEFLHDVARVGVDVLYVITGRRDSALTSPDEEMVLAGYRQLDARGRTGVLALIGG
CCCCCHHHHHHHHHHCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECC
MQPPAEKKVKKTQAEMVFNGSVGDVKNIKGDYHETRHKTVPASSKKKRTDKGS
CCCCHHHHHHHHHHHHEECCCCCCHHHCCCHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA