| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is iorB2 [H]
Identifier: 17546608
GI number: 17546608
Start: 2074034
End: 2076331
Strand: Reverse
Name: iorB2 [H]
Synonym: RSc1889
Alternate gene names: 17546608
Gene position: 2076331-2074034 (Counterclockwise)
Preceding gene: 17546609
Following gene: 17546595
Centisome position: 55.87
GC content: 74.11
Gene sequence:
>2298_bases ATGACGGCCGACGCAACCGCACCGCGCCGCGGACGGCGCCGCTTCCTGCTGGGCGCGCTCGGCATCGGCGGGGCGCTGGT AGTGGGCTGGGGCGTGCTGCCGCCGCGCAGCCGCCTGGGCGACGCGGCGGACTTTCCCGCGCAGCCCGGCGAGGTGGCGC TCAACGGGTGGATCAAGATCACGCCGCAGGGCGATGTCGTGCTCGCCATGCCGCGCGTGGAGATGGGGCAGGGCATCCAC ACCGCGCTGTCGATGCTGGCGGCGGAGGAGCTCGATATCCCGCTCGCGCGGGTCCGCGTGGAGAGCGCGCCCATCGAGCG CATCTACGGCAACGTCGTCAGCGTGGTCGACAGTGCGCTGCCGCTGCATCCGGACGATGCCGGCAAGGCTTGGGCCCGCG CGCTGCACTGGATCATGGCCAAGAGCGCCCGCGAGATCGGGCTGGTCATCACCGGCGGCAGCAGCAGCGTGGCGGATGCC TGGCAACCGGTGCGCGAGGCGGCGGCCACCGCGCGCGCCACGCTGGTGGAGGCCGCGGCGCGCGCGTGGAACGTGCAGGC CGCGCAGGTGAGCGTGCATGACGGCCGGCTGATCGGCCCGGGCGGCCGGCAGGCCGGCTTCGGCGAGGTGGCGGCGCACG CGCGCGACATCGCGCCGCCCGCGAGCGTCACGCTCAAGCCCGCGTCGCAATACCGGCTGGTCGGCCAGCCGGTGCCGCGC AGCGATGTGGCGGGCAAGACCGACGGCAGCGCGCGCTTTGCCATCGACGTCCGGCCGCCCGGCCTGCTGTACGCGGCGGT GGCGATGTGTCCGGTGTTCGGCGGCAGGCTCAAGGCCTTCGATGCGAAGGCGGCGCAGGGCATGCCCGGCGTGCGCTACG TGGTGCCGTTCGATGGCGCGGCGGGCGGCGCGCCCGGCGTGGCGGTCGTCGCCGACCACTACTGGCAGGCGCGCCAGGCC GTGGCGAAGCTCGACCCGGTGTGGGACAGCGGGCCGCATGCCGCGCTCGATTCCGCCGGCATCCGACGGCAGATCGCCGC CGCGCTCGACAGCGACCGGGGCGGCTTCACCTACCGGTCGACGGGCGATGGCCTGCAGGCGTTCGACCACGTGGGCGGCG CGACGGTGGTCGAGGCCGAATACAGCGTGCCGTATCTCGCGCATGCGGCGATGGAGCCGATCAACTGCACGGCGCAGGTG ACCCGGGACCACGTGCAGCTGTGGGCGCCGACGCAGGTCGCCACGCTGGCGCAACTGGTCGCGGCGCGCGCGGCGGGCGT GCGCAGCGAGCAGGTGCGGATCGAGGTGCCGCTGATCGGCGGCGGCTTCGGGCGCCGGCTCGAATCGGACTTCGTCGGCC AGGCGGTGGCGATCGCGGTCCGGACCGAAGGCCGGCCGGTGCAGGTGATCTGGACCCGCGAAGACGACATCCGCCACGAT TTCTACCGCCCGCAGGCCATCGCCCGGCTGAAGGCGCGCATCGAGCGCGGCCGGGTGACGGCGCTGGCCTCGCGCAGCGC CGGCCAATCCATCCTGGCCGGCGAGCTCGGCCGGCTGTTCGGCGCGCCGTCGCTCGGCATCGACCGCTATACGGCGGAGG GGCTGTTCGACCTGCCGTACGAGATCGCGCACGAGCACATCGCCCACCTGGCGGTCGACCTGCCGGTGCCGGTGGGATTC TGGCGCAGCGTCGGCCACTCCTACACGGCGTTCTTCCTGGAAGGCTTTCTCAACGAGGTGGCGGCGGCGGCCGGGCTGGA TCCGCTCGCGATGCGGCGCGACTTGCTCGAGGCGCATCCGCGCGAGCGCACGGTGCTCGACACGGCGGCGCGGGCGGCGG GCTGGGGCCAGCCGCTGGCGCAGGCCGCCGATGGGGCGCCGCGGGCGCGCGGGCTGGCGCTGCACGGCTGCTTCGGCTCG GTGGTGGCGCAGGTGGCGGAGGTCTCGCTCAAGGACGGCAAGCCCCGTGTCCATCGCGTGGTGTGCGCGGTGGACTGCGG CACGGTCGTCAACCCGGGCATCGTCGCGCGGCAGGTGGAGAGCGCGGTCATCTTCGGCCTGGGGGCGGCTCTCCATGGGC AGATCCAGGTCAAGGACGGGCAGGTCGTGCAGTCCAACTATTCCGATTACCCCGTGCTCGGGATGGCCGACACGCCGGTC ATCGAAACCCATCTCGTGCCCAGCGCGGCCGAGCCCGGCGGGGTGGGCGAGATCGCGGTGCCGCCGATCGCGCCGGCGGT GGCGCACGCCGTGGCGCAGCTCACCGGCAAGCCGGTGCGGCAGCTGCCGATGGCGTGA
Upstream 100 bases:
>100_bases ACATCGATGCCGCCATCACCAACCTGTGCCGCTGCGGCACGTATCCGCGCGTGCGGACCGCCATCAAGCGTGCCGCGCAG GCGCTGCGGGAGGGCCGCGC
Downstream 100 bases:
>100_bases TGGAGCGGCGCCCCGGGGCCGACCGCCGGACAGCGATCGGCGCGGGCGCTACGCGGCTTCGTCCGGGAACACCGGCTCGC CCAGGTTCAGCATCAGCCGG
Product: transmembrane isoquinoline 1-oxidoreductase subunit beta oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 765; Mature: 764
Protein sequence:
>765_residues MTADATAPRRGRRRFLLGALGIGGALVVGWGVLPPRSRLGDAADFPAQPGEVALNGWIKITPQGDVVLAMPRVEMGQGIH TALSMLAAEELDIPLARVRVESAPIERIYGNVVSVVDSALPLHPDDAGKAWARALHWIMAKSAREIGLVITGGSSSVADA WQPVREAAATARATLVEAAARAWNVQAAQVSVHDGRLIGPGGRQAGFGEVAAHARDIAPPASVTLKPASQYRLVGQPVPR SDVAGKTDGSARFAIDVRPPGLLYAAVAMCPVFGGRLKAFDAKAAQGMPGVRYVVPFDGAAGGAPGVAVVADHYWQARQA VAKLDPVWDSGPHAALDSAGIRRQIAAALDSDRGGFTYRSTGDGLQAFDHVGGATVVEAEYSVPYLAHAAMEPINCTAQV TRDHVQLWAPTQVATLAQLVAARAAGVRSEQVRIEVPLIGGGFGRRLESDFVGQAVAIAVRTEGRPVQVIWTREDDIRHD FYRPQAIARLKARIERGRVTALASRSAGQSILAGELGRLFGAPSLGIDRYTAEGLFDLPYEIAHEHIAHLAVDLPVPVGF WRSVGHSYTAFFLEGFLNEVAAAAGLDPLAMRRDLLEAHPRERTVLDTAARAAGWGQPLAQAADGAPRARGLALHGCFGS VVAQVAEVSLKDGKPRVHRVVCAVDCGTVVNPGIVARQVESAVIFGLGAALHGQIQVKDGQVVQSNYSDYPVLGMADTPV IETHLVPSAAEPGGVGEIAVPPIAPAVAHAVAQLTGKPVRQLPMA
Sequences:
>Translated_765_residues MTADATAPRRGRRRFLLGALGIGGALVVGWGVLPPRSRLGDAADFPAQPGEVALNGWIKITPQGDVVLAMPRVEMGQGIH TALSMLAAEELDIPLARVRVESAPIERIYGNVVSVVDSALPLHPDDAGKAWARALHWIMAKSAREIGLVITGGSSSVADA WQPVREAAATARATLVEAAARAWNVQAAQVSVHDGRLIGPGGRQAGFGEVAAHARDIAPPASVTLKPASQYRLVGQPVPR SDVAGKTDGSARFAIDVRPPGLLYAAVAMCPVFGGRLKAFDAKAAQGMPGVRYVVPFDGAAGGAPGVAVVADHYWQARQA VAKLDPVWDSGPHAALDSAGIRRQIAAALDSDRGGFTYRSTGDGLQAFDHVGGATVVEAEYSVPYLAHAAMEPINCTAQV TRDHVQLWAPTQVATLAQLVAARAAGVRSEQVRIEVPLIGGGFGRRLESDFVGQAVAIAVRTEGRPVQVIWTREDDIRHD FYRPQAIARLKARIERGRVTALASRSAGQSILAGELGRLFGAPSLGIDRYTAEGLFDLPYEIAHEHIAHLAVDLPVPVGF WRSVGHSYTAFFLEGFLNEVAAAAGLDPLAMRRDLLEAHPRERTVLDTAARAAGWGQPLAQAADGAPRARGLALHGCFGS VVAQVAEVSLKDGKPRVHRVVCAVDCGTVVNPGIVARQVESAVIFGLGAALHGQIQVKDGQVVQSNYSDYPVLGMADTPV IETHLVPSAAEPGGVGEIAVPPIAPAVAHAVAQLTGKPVRQLPMA >Mature_764_residues TADATAPRRGRRRFLLGALGIGGALVVGWGVLPPRSRLGDAADFPAQPGEVALNGWIKITPQGDVVLAMPRVEMGQGIHT ALSMLAAEELDIPLARVRVESAPIERIYGNVVSVVDSALPLHPDDAGKAWARALHWIMAKSAREIGLVITGGSSSVADAW QPVREAAATARATLVEAAARAWNVQAAQVSVHDGRLIGPGGRQAGFGEVAAHARDIAPPASVTLKPASQYRLVGQPVPRS DVAGKTDGSARFAIDVRPPGLLYAAVAMCPVFGGRLKAFDAKAAQGMPGVRYVVPFDGAAGGAPGVAVVADHYWQARQAV AKLDPVWDSGPHAALDSAGIRRQIAAALDSDRGGFTYRSTGDGLQAFDHVGGATVVEAEYSVPYLAHAAMEPINCTAQVT RDHVQLWAPTQVATLAQLVAARAAGVRSEQVRIEVPLIGGGFGRRLESDFVGQAVAIAVRTEGRPVQVIWTREDDIRHDF YRPQAIARLKARIERGRVTALASRSAGQSILAGELGRLFGAPSLGIDRYTAEGLFDLPYEIAHEHIAHLAVDLPVPVGFW RSVGHSYTAFFLEGFLNEVAAAAGLDPLAMRRDLLEAHPRERTVLDTAARAAGWGQPLAQAADGAPRARGLALHGCFGSV VAQVAEVSLKDGKPRVHRVVCAVDCGTVVNPGIVARQVESAVIFGLGAALHGQIQVKDGQVVQSNYSDYPVLGMADTPVI ETHLVPSAAEPGGVGEIAVPPIAPAVAHAVAQLTGKPVRQLPMA
Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786478, Length=387, Percent_Identity=27.906976744186, Blast_Score=82, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012368 - InterPro: IPR006311 [H]
Pfam domain/function: PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.3.99.16 [H]
Molecular weight: Translated: 80277; Mature: 80145
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTADATAPRRGRRRFLLGALGIGGALVVGWGVLPPRSRLGDAADFPAQPGEVALNGWIKI CCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCHHHCCCCCCCCCCCCCEEEECEEEE TPQGDVVLAMPRVEMGQGIHTALSMLAAEELDIPLARVRVESAPIERIYGNVVSVVDSAL CCCCCEEEEECCHHHCCCHHHHHHHHHHHHCCCCHHHEEECCCCHHHHHHHHHHHHHHHC PLHPDDAGKAWARALHWIMAKSAREIGLVITGGSSSVADAWQPVREAAATARATLVEAAA CCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH RAWNVQAAQVSVHDGRLIGPGGRQAGFGEVAAHARDIAPPASVTLKPASQYRLVGQPVPR HHCCCEEEEEEECCCEEECCCCCCCCCHHHHHHHHHCCCCCCEEECCCHHEEECCCCCCC SDVAGKTDGSARFAIDVRPPGLLYAAVAMCPVFGGRLKAFDAKAAQGMPGVRYVVPFDGA CCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCEEECCCHHHCCCCCCEEEEECCCC AGGAPGVAVVADHYWQARQAVAKLDPVWDSGPHAALDSAGIRRQIAAALDSDRGGFTYRS CCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECC TGDGLQAFDHVGGATVVEAEYSVPYLAHAAMEPINCTAQVTRDHVQLWAPTQVATLAQLV CCCHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCHHHHCCCCEEEECCHHHHHHHHHH AARAAGVRSEQVRIEVPLIGGGFGRRLESDFVGQAVAIAVRTEGRPVQVIWTREDDIRHD HHHHCCCCCCEEEEEEEEECCCHHHHHHHHHCCCEEEEEEECCCCEEEEEEECCCCHHHH FYRPQAIARLKARIERGRVTALASRSAGQSILAGELGRLFGAPSLGIDRYTAEGLFDLPY HCCHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCH EIAHEHIAHLAVDLPVPVGFWRSVGHSYTAFFLEGFLNEVAAAAGLDPLAMRRDLLEAHP HHHHHHHHHHEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC RERTVLDTAARAAGWGQPLAQAADGAPRARGLALHGCFGSVVAQVAEVSLKDGKPRVHRV CCHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHCCCCCCCEEEE VCAVDCGTVVNPGIVARQVESAVIFGLGAALHGQIQVKDGQVVQSNYSDYPVLGMADTPV EEEEECCCCCCCCHHHHHHHHHHHEEECCEEECEEEEECCEEEECCCCCCCEEECCCCCE IETHLVPSAAEPGGVGEIAVPPIAPAVAHAVAQLTGKPVRQLPMA EEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCC >Mature Secondary Structure TADATAPRRGRRRFLLGALGIGGALVVGWGVLPPRSRLGDAADFPAQPGEVALNGWIKI CCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCHHHCCCCCCCCCCCCCEEEECEEEE TPQGDVVLAMPRVEMGQGIHTALSMLAAEELDIPLARVRVESAPIERIYGNVVSVVDSAL CCCCCEEEEECCHHHCCCHHHHHHHHHHHHCCCCHHHEEECCCCHHHHHHHHHHHHHHHC PLHPDDAGKAWARALHWIMAKSAREIGLVITGGSSSVADAWQPVREAAATARATLVEAAA CCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH RAWNVQAAQVSVHDGRLIGPGGRQAGFGEVAAHARDIAPPASVTLKPASQYRLVGQPVPR HHCCCEEEEEEECCCEEECCCCCCCCCHHHHHHHHHCCCCCCEEECCCHHEEECCCCCCC SDVAGKTDGSARFAIDVRPPGLLYAAVAMCPVFGGRLKAFDAKAAQGMPGVRYVVPFDGA CCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCEEECCCHHHCCCCCCEEEEECCCC AGGAPGVAVVADHYWQARQAVAKLDPVWDSGPHAALDSAGIRRQIAAALDSDRGGFTYRS CCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECC TGDGLQAFDHVGGATVVEAEYSVPYLAHAAMEPINCTAQVTRDHVQLWAPTQVATLAQLV CCCHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCHHHHCCCCEEEECCHHHHHHHHHH AARAAGVRSEQVRIEVPLIGGGFGRRLESDFVGQAVAIAVRTEGRPVQVIWTREDDIRHD HHHHCCCCCCEEEEEEEEECCCHHHHHHHHHCCCEEEEEEECCCCEEEEEEECCCCHHHH FYRPQAIARLKARIERGRVTALASRSAGQSILAGELGRLFGAPSLGIDRYTAEGLFDLPY HCCHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCH EIAHEHIAHLAVDLPVPVGFWRSVGHSYTAFFLEGFLNEVAAAAGLDPLAMRRDLLEAHP HHHHHHHHHHEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC RERTVLDTAARAAGWGQPLAQAADGAPRARGLALHGCFGSVVAQVAEVSLKDGKPRVHRV CCHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHCCCCCCCEEEE VCAVDCGTVVNPGIVARQVESAVIFGLGAALHGQIQVKDGQVVQSNYSDYPVLGMADTPV EEEEECCCCCCCCHHHHHHHHHHHEEECCEEECEEEEECCEEEECCCCCCCEEECCCCCE IETHLVPSAAEPGGVGEIAVPPIAPAVAHAVAQLTGKPVRQLPMA EEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7782304; 8157655 [H]