Click here to switch to the map view.

The map label for this gene is 17546533

Identifier: 17546533

GI number: 17546533

Start: 1980282

End: 1980944

Strand: Direct

Name: 17546533

Synonym: RSc1814

Alternate gene names: NA

Gene position: 1980282-1980944 (Clockwise)

Preceding gene: 17546531

Following gene: 17546534

Centisome position: 53.28

GC content: 55.96

Gene sequence:

>663_bases
TTGATTGATTTGATAATGATAATCATTATCAATAAAGACGTCCACCTTCGCTTCAAGGTTCATCTCGGGATGTCGCAAAC
TGCCACGCAGGAACCGGGGCAATGCCAGGCTGCGATGGACCTGGACTGCGCGCAAGGGGTAAACGTACTCCGTGCAAAAT
CCTGCGCTTCCCCCGCAAAGCCTTTCCCCATAAGGATTTTCGAGCGATTCCGATCATTGTTTCCGCTGCTCGGCCAAGGC
TGGGCGCAGGATACCGGCTTGCGATTTCGGGCAGGTGCCGATGCGCGCACGAAGAGACAACAGGTCAAGGTCACGTCGAT
ATTGATGGCGGCCCGCCAGACGCAACGCGCGCGCCGCTCAAATCGATCAGGGCGATACGTATTTGGCAGCCTTTTTTCGC
TTGGCAGGAAACCTTTGTACGGCCAGATTTCTATAAAGGGCACGCGGTCCATCACAGGGATGGCATTTGCAATGGGCTTC
GTGTTTCCAACAGTCGCTCAGGGAACAGCTCGGGCTCAGAACCTGTCACGCAGGTTGAACCGTAAGCGCGGGCAGTTGGG
GAAAGGTTTGCGCACCAGGATGAGTCTCTGCACCAAAGCGGCCTTGGCCAGAACCGGAGCATCCGGCGCACACGCAAGCC
GATATTTCTGGACGAGCGTATGA

Upstream 100 bases:

>100_bases
TCGGTTTCGACCGCCCCGGCAGACGGCGGGTGTTTTGCCGTGCGCGCCGGTTTCGGGCGGGCATTCGGCCTGGAGCGGTT
TTCCGGCGCCGGACCGATGC

Downstream 100 bases:

>100_bases
GGTGCAAAACCGCCCGAGCAGACGGGGCAATCGGCTCTTTCATGCTGCACACGGCGCTGCATTCGCTCCAGACTTCGCAT
CGTTTGCGCCTGATCGGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MIDLIMIIIINKDVHLRFKVHLGMSQTATQEPGQCQAAMDLDCAQGVNVLRAKSCASPAKPFPIRIFERFRSLFPLLGQG
WAQDTGLRFRAGADARTKRQQVKVTSILMAARQTQRARRSNRSGRYVFGSLFSLGRKPLYGQISIKGTRSITGMAFAMGF
VFPTVAQGTARAQNLSRRLNRKRGQLGKGLRTRMSLCTKAALARTGASGAHASRYFWTSV

Sequences:

>Translated_220_residues
MIDLIMIIIINKDVHLRFKVHLGMSQTATQEPGQCQAAMDLDCAQGVNVLRAKSCASPAKPFPIRIFERFRSLFPLLGQG
WAQDTGLRFRAGADARTKRQQVKVTSILMAARQTQRARRSNRSGRYVFGSLFSLGRKPLYGQISIKGTRSITGMAFAMGF
VFPTVAQGTARAQNLSRRLNRKRGQLGKGLRTRMSLCTKAALARTGASGAHASRYFWTSV
>Mature_220_residues
MIDLIMIIIINKDVHLRFKVHLGMSQTATQEPGQCQAAMDLDCAQGVNVLRAKSCASPAKPFPIRIFERFRSLFPLLGQG
WAQDTGLRFRAGADARTKRQQVKVTSILMAARQTQRARRSNRSGRYVFGSLFSLGRKPLYGQISIKGTRSITGMAFAMGF
VFPTVAQGTARAQNLSRRLNRKRGQLGKGLRTRMSLCTKAALARTGASGAHASRYFWTSV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24338; Mature: 24338

Theoretical pI: Translated: 12.32; Mature: 12.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDLIMIIIINKDVHLRFKVHLGMSQTATQEPGQCQAAMDLDCAQGVNVLRAKSCASPAK
CCEEEEEEEECCCEEEEEEEEECCCCCCCCCCCCCHHHCCCCHHHCCHHHHHHHCCCCCC
PFPIRIFERFRSLFPLLGQGWAQDTGLRFRAGADARTKRQQVKVTSILMAARQTQRARRS
CCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
NRSGRYVFGSLFSLGRKPLYGQISIKGTRSITGMAFAMGFVFPTVAQGTARAQNLSRRLN
CCCCCEEHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKRGQLGKGLRTRMSLCTKAALARTGASGAHASRYFWTSV
HHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECC
>Mature Secondary Structure
MIDLIMIIIINKDVHLRFKVHLGMSQTATQEPGQCQAAMDLDCAQGVNVLRAKSCASPAK
CCEEEEEEEECCCEEEEEEEEECCCCCCCCCCCCCHHHCCCCHHHCCHHHHHHHCCCCCC
PFPIRIFERFRSLFPLLGQGWAQDTGLRFRAGADARTKRQQVKVTSILMAARQTQRARRS
CCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
NRSGRYVFGSLFSLGRKPLYGQISIKGTRSITGMAFAMGFVFPTVAQGTARAQNLSRRLN
CCCCCEEHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKRGQLGKGLRTRMSLCTKAALARTGASGAHASRYFWTSV
HHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA