Definition Ralstonia solanacearum GMI1000, complete genome.
Accession NC_003295
Length 3,716,413

Click here to switch to the map view.

The map label for this gene is eriC [C]

Identifier: 17546522

GI number: 17546522

Start: 1940418

End: 1941713

Strand: Reverse

Name: eriC [C]

Synonym: RSc1803

Alternate gene names: 17546522

Gene position: 1941713-1940418 (Counterclockwise)

Preceding gene: 17546523

Following gene: 17546521

Centisome position: 52.25

GC content: 70.37

Gene sequence:

>1296_bases
ATGCTGCCGTATCTGCTGCGCTGGCTGTTCCTGGCCTCGCTGACCGGCGTGCTGGCCGGCCTCGGCTCGGCGGCGCTGCT
GCTCGCGCTGGACTGGGCCACGCTCACGCGCACGGCCCACCCGTGGCTGCTCTGGCTCCTGCCGCTGGCCGGGCTGGCCG
TTGGCCTGCTCTATCACTACACGGGCCGCGCGGTCGAAGGTGGCAACAATCTGCTGATCGACGAAATCCACGACCCGAAG
CGCGTCGTGCCGAAACGCATGGCGCCGCTGATCCTGCTCGGCACGGTCGTGACGCATCTGTTCGGCGGCTCGGCCGGGCG
CGAGGGGACCGCCGTCCAGATGGGCGGCAGCTTCGCGGATGGCCTCACCCGCCTGTTCCGGCTCGACAACGAGGCGCGGC
GCATCCTGCTGATGTCCGGCATCAGCGCGGGCTTTGCCTCGGTGTTCGGCACCCCGCTGGCGGGCGCCGTGTTCGGCCTG
GAAGTACTGGCCATCGGCCGCCTGCGCTACGACGCGATCCTGCCCTGCTTCGTGGCGGCCATCGTCGGCGACCTCGTGCC
GCCGCTGCTCGGCGTCCATCACACGCCGTATGCGATTCCGTTCGTTCCGCATCTCACGCCACTGGCGATCGGCGCGGTGG
TGGTTGCCGGCATCGTCTTCGGCCTCGCGGGCATGACCTTTGCCGAGCTGACCCATCGGCTCGGGCGCTGGCTGAAAAAG
CGCATTCCGTTCGGCCCGCTGCGCCCGGTGCTGGGCGGCTGCGTGGTCGCGGCGGCGGCGACGGCGCTCGGCACCGACAA
ATACCTGGGGCTGGGCATCCCGGTCATCGTGGACGCGTTCCACCAGCCGCTGCCGGCGTACGACTTCGCGGGCAAGGCCG
CGTTTACCATCGTGACGCTGGCCTCCGGCTTCAAGGGGGGCGAGGTGACGCCGCTCTTCTACATTGGGGCCACCCTCGGC
AATGCGCTCGGCTACGTGCTGCCGCTGCCGTTTGCGCTGCTGGCCGGCCTGGGCTTCGTCGCCGTCTTCGCGGGCGCGGC
GAATACGCCCATCGCATCGACCATCATGGCCATCGAGCTGTTCGGGCCCGAAGTCGGCACCTTTGCCGGCATCGCCTGCG
TGGTCAGCTACCTCTTCTCGGGGCACACCGGCATCTATCCCGCGCAGCGCGTCGGCCATGCCAAGCGCGCGTCGGTTCCG
GAGGGGCTGCGCTTGTCCGAGGTGCCGGCATTCCGGCAAGCCTCCACCGCAGCCAAGCCGGACGCGCCGCCCGAGCCGCC
TTCGCCCCAGCCATGA

Upstream 100 bases:

>100_bases
GTTGTAGGCACGCGCCCATACGGCGTTCCGCCGTCCAGGTTTGAGTGCTTCGAATCTGGTTCTCATGAAAAAGACATACG
CTCTTCCGGAGCAAGTGGCC

Downstream 100 bases:

>100_bases
GCGGGACGGCGCCCCGCCGCGCGGGCCGCGGGGTTGCGCGGCCGGCCGGTCGGTCGCCGTCACTCCGCAGTGACGGCATC
CGGATGGCCGGGCATTGCAC

Product: hypothetical protein

Products: Cl Ion [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MLPYLLRWLFLASLTGVLAGLGSAALLLALDWATLTRTAHPWLLWLLPLAGLAVGLLYHYTGRAVEGGNNLLIDEIHDPK
RVVPKRMAPLILLGTVVTHLFGGSAGREGTAVQMGGSFADGLTRLFRLDNEARRILLMSGISAGFASVFGTPLAGAVFGL
EVLAIGRLRYDAILPCFVAAIVGDLVPPLLGVHHTPYAIPFVPHLTPLAIGAVVVAGIVFGLAGMTFAELTHRLGRWLKK
RIPFGPLRPVLGGCVVAAAATALGTDKYLGLGIPVIVDAFHQPLPAYDFAGKAAFTIVTLASGFKGGEVTPLFYIGATLG
NALGYVLPLPFALLAGLGFVAVFAGAANTPIASTIMAIELFGPEVGTFAGIACVVSYLFSGHTGIYPAQRVGHAKRASVP
EGLRLSEVPAFRQASTAAKPDAPPEPPSPQP

Sequences:

>Translated_431_residues
MLPYLLRWLFLASLTGVLAGLGSAALLLALDWATLTRTAHPWLLWLLPLAGLAVGLLYHYTGRAVEGGNNLLIDEIHDPK
RVVPKRMAPLILLGTVVTHLFGGSAGREGTAVQMGGSFADGLTRLFRLDNEARRILLMSGISAGFASVFGTPLAGAVFGL
EVLAIGRLRYDAILPCFVAAIVGDLVPPLLGVHHTPYAIPFVPHLTPLAIGAVVVAGIVFGLAGMTFAELTHRLGRWLKK
RIPFGPLRPVLGGCVVAAAATALGTDKYLGLGIPVIVDAFHQPLPAYDFAGKAAFTIVTLASGFKGGEVTPLFYIGATLG
NALGYVLPLPFALLAGLGFVAVFAGAANTPIASTIMAIELFGPEVGTFAGIACVVSYLFSGHTGIYPAQRVGHAKRASVP
EGLRLSEVPAFRQASTAAKPDAPPEPPSPQP
>Mature_431_residues
MLPYLLRWLFLASLTGVLAGLGSAALLLALDWATLTRTAHPWLLWLLPLAGLAVGLLYHYTGRAVEGGNNLLIDEIHDPK
RVVPKRMAPLILLGTVVTHLFGGSAGREGTAVQMGGSFADGLTRLFRLDNEARRILLMSGISAGFASVFGTPLAGAVFGL
EVLAIGRLRYDAILPCFVAAIVGDLVPPLLGVHHTPYAIPFVPHLTPLAIGAVVVAGIVFGLAGMTFAELTHRLGRWLKK
RIPFGPLRPVLGGCVVAAAATALGTDKYLGLGIPVIVDAFHQPLPAYDFAGKAAFTIVTLASGFKGGEVTPLFYIGATLG
NALGYVLPLPFALLAGLGFVAVFAGAANTPIASTIMAIELFGPEVGTFAGIACVVSYLFSGHTGIYPAQRVGHAKRASVP
EGLRLSEVPAFRQASTAAKPDAPPEPPSPQP

Specific function: Selective chloride channel [C]

COG id: COG0038

COG function: function code P; Chloride channel protein EriC

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chloride channel (TC 2.A.49) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014743
- InterPro:   IPR001807 [H]

Pfam domain/function: PF00654 Voltage_CLC [H]

EC number: NA

Molecular weight: Translated: 44951; Mature: 44951

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPYLLRWLFLASLTGVLAGLGSAALLLALDWATLTRTAHPWLLWLLPLAGLAVGLLYHY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
TGRAVEGGNNLLIDEIHDPKRVVPKRMAPLILLGTVVTHLFGGSAGREGTAVQMGGSFAD
CCCEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHH
GLTRLFRLDNEARRILLMSGISAGFASVFGTPLAGAVFGLEVLAIGRLRYDAILPCFVAA
HHHHHHHCCCHHHEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVGDLVPPLLGVHHTPYAIPFVPHLTPLAIGAVVVAGIVFGLAGMTFAELTHRLGRWLKK
HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RIPFGPLRPVLGGCVVAAAATALGTDKYLGLGIPVIVDAFHQPLPAYDFAGKAAFTIVTL
HCCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHCCCCCCCCCCCCHHHHHHHH
ASGFKGGEVTPLFYIGATLGNALGYVLPLPFALLAGLGFVAVFAGAANTPIASTIMAIEL
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
FGPEVGTFAGIACVVSYLFSGHTGIYPAQRVGHAKRASVPEGLRLSEVPAFRQASTAAKP
CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHCCCCCCCCHHCCCCHHHHCCCCCC
DAPPEPPSPQP
CCCCCCCCCCC
>Mature Secondary Structure
MLPYLLRWLFLASLTGVLAGLGSAALLLALDWATLTRTAHPWLLWLLPLAGLAVGLLYHY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
TGRAVEGGNNLLIDEIHDPKRVVPKRMAPLILLGTVVTHLFGGSAGREGTAVQMGGSFAD
CCCEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHH
GLTRLFRLDNEARRILLMSGISAGFASVFGTPLAGAVFGLEVLAIGRLRYDAILPCFVAA
HHHHHHHCCCHHHEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVGDLVPPLLGVHHTPYAIPFVPHLTPLAIGAVVVAGIVFGLAGMTFAELTHRLGRWLKK
HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RIPFGPLRPVLGGCVVAAAATALGTDKYLGLGIPVIVDAFHQPLPAYDFAGKAAFTIVTL
HCCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHCCCCCCCCCCCCHHHHHHHH
ASGFKGGEVTPLFYIGATLGNALGYVLPLPFALLAGLGFVAVFAGAANTPIASTIMAIEL
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
FGPEVGTFAGIACVVSYLFSGHTGIYPAQRVGHAKRASVPEGLRLSEVPAFRQASTAAKP
CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHCCCCCCCCHHCCCCHHHHCCCCCC
DAPPEPPSPQP
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Cl Ion [Periplasm] [C]

Specific reaction: Cl Ion [Periplasm] = Cl Ion [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]