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The map label for this gene is 17546459

Identifier: 17546459

GI number: 17546459

Start: 1862281

End: 1863270

Strand: Reverse

Name: 17546459

Synonym: RSc1740

Alternate gene names: NA

Gene position: 1863270-1862281 (Counterclockwise)

Preceding gene: 17546460

Following gene: 17546458

Centisome position: 50.14

GC content: 67.68

Gene sequence:

>990_bases
ATGTCCCGCTTCACGCACGTCTTCCGCCCCGTCGCGCTGGCCGCCCTGGCCGCGCTGCCGATGGCGCTTCTGCAAGCCAC
GCCCGCCCTGGCGCAAGCCGCCAAGTCGGTCGAAGTGCTGTCGATCGTCGAACACCCGGCGCTCGACGCCATCCGCGACG
GCGTCAAGGAAGAGCTGAAGGCCCAGGGCTTCGACGCCGGCAAGAACCTGAAGTGGGAATACCAGAGCGCGCAGGGCAGC
GCCGCCACCGCCGCGCAGATCGCCCGCAAGTTCATCGGCGACAAGCCGGACGCCATCGTCGCCATCACCACGCCGGCGGC
GCAGGCCGTGGTGGCGGCCACCAAGACCGTCCCGGTGGTGTATGCCGGCGTGACCGATCCGGTGGCCGCGCAGCTGGTCA
AGAGCTGGGAGCCGTCGGGCACCAACGTGACCGGCGTATCCGACAAGCTGCCGCTGGACAAGCAGATCGCCCTGATCAAG
CGCGTGGTGCCGCACGCCAAGCGCGTCGGCATGATCTACAACCCGGGCGAGGCCAACTCGGTGGTGGTCGTCAATGAACT
GAAGAAGCTGCTGTCGGCCCAGGGCCTGACGCTGGTGGAATCGGCCGCGCCGCGCACGGTCGATATTGCCCCGGCAACCA
AGAACCTGATCGGCAAGGTGGACGTGATCTACACCAGCACCGACAACAACGTGGTGTCGGCGTACGAATCGCTGGTGAAG
GTGGCCAACGAGGCCAAGATTCCGCTGGTCGCCGCCGACACCGACAGCGTCAAGCGCGGCGCCATCGCGGCGCTGGGCAT
CAACTACTACAGGCTCGGCCGCCAGACCGGCACCGTGGTCGCGCGCATTCTGAAGGGCGAGAAGCCGGGCGCGATCGCCT
CGACCGGCAGCACCGACCTGGAACTGTTCGTGAACCCGGGCGCGGCCGCCAAGCAAGGCGCCACGCTGTCGGCAGACCTG
CTCAAGGACGCCAAGGAAACCGTCAAGTAA

Upstream 100 bases:

>100_bases
GGCCTGTGCATCCGACGGCACTCGATCAGCGCCACACCGGTCGCGGCCCCTCCCGTCCGCGTCCAGAGCGAAACCACCAA
AAAAGGAACCGGAGATCCGT

Downstream 100 bases:

>100_bases
TCCGGCTCCGATCGTCGTACGGCGCCGGTCGCCTATCCTTGCAGGAGCGGCCGGCGCGGGAGACGGCGCGCAGAACGCGG
TGCGCGGCCACCCGCCGCAA

Product: signal peptide protein

Products: NA

Alternate protein names: ABC Transporter; Lipoprotein; ABC Transporter Permease; ABC Transporter Periplasmic Protein; ABC-Type Transporter Periplasmic Component; Permease; Permease Protein; Exported Protein; ABC-Type Transport Protein Periplasmic C; ABC Transporter Permease Protein; ABC-Type Transporter

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MSRFTHVFRPVALAALAALPMALLQATPALAQAAKSVEVLSIVEHPALDAIRDGVKEELKAQGFDAGKNLKWEYQSAQGS
AATAAQIARKFIGDKPDAIVAITTPAAQAVVAATKTVPVVYAGVTDPVAAQLVKSWEPSGTNVTGVSDKLPLDKQIALIK
RVVPHAKRVGMIYNPGEANSVVVVNELKKLLSAQGLTLVESAAPRTVDIAPATKNLIGKVDVIYTSTDNNVVSAYESLVK
VANEAKIPLVAADTDSVKRGAIAALGINYYRLGRQTGTVVARILKGEKPGAIASTGSTDLELFVNPGAAAKQGATLSADL
LKDAKETVK

Sequences:

>Translated_329_residues
MSRFTHVFRPVALAALAALPMALLQATPALAQAAKSVEVLSIVEHPALDAIRDGVKEELKAQGFDAGKNLKWEYQSAQGS
AATAAQIARKFIGDKPDAIVAITTPAAQAVVAATKTVPVVYAGVTDPVAAQLVKSWEPSGTNVTGVSDKLPLDKQIALIK
RVVPHAKRVGMIYNPGEANSVVVVNELKKLLSAQGLTLVESAAPRTVDIAPATKNLIGKVDVIYTSTDNNVVSAYESLVK
VANEAKIPLVAADTDSVKRGAIAALGINYYRLGRQTGTVVARILKGEKPGAIASTGSTDLELFVNPGAAAKQGATLSADL
LKDAKETVK
>Mature_328_residues
SRFTHVFRPVALAALAALPMALLQATPALAQAAKSVEVLSIVEHPALDAIRDGVKEELKAQGFDAGKNLKWEYQSAQGSA
ATAAQIARKFIGDKPDAIVAITTPAAQAVVAATKTVPVVYAGVTDPVAAQLVKSWEPSGTNVTGVSDKLPLDKQIALIKR
VVPHAKRVGMIYNPGEANSVVVVNELKKLLSAQGLTLVESAAPRTVDIAPATKNLIGKVDVIYTSTDNNVVSAYESLVKV
ANEAKIPLVAADTDSVKRGAIAALGINYYRLGRQTGTVVARILKGEKPGAIASTGSTDLELFVNPGAAAKQGATLSADLL
KDAKETVK

Specific function: Unknown

COG id: COG2984

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34273; Mature: 34142

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRFTHVFRPVALAALAALPMALLQATPALAQAAKSVEVLSIVEHPALDAIRDGVKEELK
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
AQGFDAGKNLKWEYQSAQGSAATAAQIARKFIGDKPDAIVAITTPAAQAVVAATKTVPVV
HCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHCCCCEE
YAGVTDPVAAQLVKSWEPSGTNVTGVSDKLPLDKQIALIKRVVPHAKRVGMIYNPGEANS
EECCCCHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHCCEEECCCCCCC
VVVVNELKKLLSAQGLTLVESAAPRTVDIAPATKNLIGKVDVIYTSTDNNVVSAYESLVK
EEEHHHHHHHHHHCCCEEECCCCCCEEEECCCHHHHHCEEEEEEECCCCHHHHHHHHHHH
VANEAKIPLVAADTDSVKRGAIAALGINYYRLGRQTGTVVARILKGEKPGAIASTGSTDL
HHCCCCCEEEECCCCCHHHCCEEEECCHHHHHCCHHHHHHHHHHCCCCCCCEECCCCCCE
ELFVNPGAAAKQGATLSADLLKDAKETVK
EEEECCCCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
SRFTHVFRPVALAALAALPMALLQATPALAQAAKSVEVLSIVEHPALDAIRDGVKEELK
CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
AQGFDAGKNLKWEYQSAQGSAATAAQIARKFIGDKPDAIVAITTPAAQAVVAATKTVPVV
HCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHCCCCEE
YAGVTDPVAAQLVKSWEPSGTNVTGVSDKLPLDKQIALIKRVVPHAKRVGMIYNPGEANS
EECCCCHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHCCEEECCCCCCC
VVVVNELKKLLSAQGLTLVESAAPRTVDIAPATKNLIGKVDVIYTSTDNNVVSAYESLVK
EEEHHHHHHHHHHCCCEEECCCCCCEEEECCCHHHHHCEEEEEEECCCCHHHHHHHHHHH
VANEAKIPLVAADTDSVKRGAIAALGINYYRLGRQTGTVVARILKGEKPGAIASTGSTDL
HHCCCCCEEEECCCCCHHHCCEEEECCHHHHHCCHHHHHHHHHHCCCCCCCEECCCCCCE
ELFVNPGAAAKQGATLSADLLKDAKETVK
EEEECCCCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA