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The map label for this gene is 17546393

Identifier: 17546393

GI number: 17546393

Start: 1793626

End: 1794120

Strand: Reverse

Name: 17546393

Synonym: RSc1674

Alternate gene names: NA

Gene position: 1794120-1793626 (Counterclockwise)

Preceding gene: 17546416

Following gene: 17546392

Centisome position: 48.28

GC content: 60.81

Gene sequence:

>495_bases
ATGAGACCCGCCCGAAAACCCGCTCGAGTCATCCTCGCCGAGAACCTCGCTAGCCTGATGGCTGCGTCCTCCAACGTACG
CAGCCAAAACCAACTGGCGAAGAAGTCAGGCATCGGCCAAACGACCATCAGCAAATGGCTGCGCTCCGACATGGACGTGT
GGCCCCGCCTTGATGCGATTGAGGAAGTCGCCGACGCACTCGGCATCACAGTGGCGGAACTGCTGACAGACCAAGACGCG
CGGCCGAAAGGCAACGCAGGCAATGCGGCGATAGACGACGCCTACAGCCGCCTATGCGAGGACGTCGCGACAACACGGGC
ACGCGATTTACAGATCGCGCAAGGACTCGCGCAACTGGTGGACGAATTGCGCGCCAGGGCTCGAAGCAGCGTGCAAAACG
CAATGAACACACCGAACCCAACCCCAGATTCTGATTATTTCCTTAGCGGCGGACCACCTGCCCGCAAGAAGCCCCCCAAG
AAGGGCGCGGTATAG

Upstream 100 bases:

>100_bases
GCAAGCATGGGTTTTTGCATGCAGCCGAGGTTAGCACGCAAGGGCTAAGCATACAAGAAACTAGCACCACATGACTAACC
GAATTAGCAAAAATATGCTC

Downstream 100 bases:

>100_bases
CGGCTTACCAACAAGCCGAGAACGCCTCCCCCGTCAAGCGCGGGATTCTCAAATTATGTGCCAGCGGACACAATAGGAGA
CTTCAACTCCCCTTTTTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MRPARKPARVILAENLASLMAASSNVRSQNQLAKKSGIGQTTISKWLRSDMDVWPRLDAIEEVADALGITVAELLTDQDA
RPKGNAGNAAIDDAYSRLCEDVATTRARDLQIAQGLAQLVDELRARARSSVQNAMNTPNPTPDSDYFLSGGPPARKKPPK
KGAV

Sequences:

>Translated_164_residues
MRPARKPARVILAENLASLMAASSNVRSQNQLAKKSGIGQTTISKWLRSDMDVWPRLDAIEEVADALGITVAELLTDQDA
RPKGNAGNAAIDDAYSRLCEDVATTRARDLQIAQGLAQLVDELRARARSSVQNAMNTPNPTPDSDYFLSGGPPARKKPPK
KGAV
>Mature_164_residues
MRPARKPARVILAENLASLMAASSNVRSQNQLAKKSGIGQTTISKWLRSDMDVWPRLDAIEEVADALGITVAELLTDQDA
RPKGNAGNAAIDDAYSRLCEDVATTRARDLQIAQGLAQLVDELRARARSSVQNAMNTPNPTPDSDYFLSGGPPARKKPPK
KGAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17635; Mature: 17635

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPARKPARVILAENLASLMAASSNVRSQNQLAKKSGIGQTTISKWLRSDMDVWPRLDAI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHH
EEVADALGITVAELLTDQDARPKGNAGNAAIDDAYSRLCEDVATTRARDLQIAQGLAQLV
HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DELRARARSSVQNAMNTPNPTPDSDYFLSGGPPARKKPPKKGAV
HHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRPARKPARVILAENLASLMAASSNVRSQNQLAKKSGIGQTTISKWLRSDMDVWPRLDAI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHH
EEVADALGITVAELLTDQDARPKGNAGNAAIDDAYSRLCEDVATTRARDLQIAQGLAQLV
HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DELRARARSSVQNAMNTPNPTPDSDYFLSGGPPARKKPPKKGAV
HHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA