Click here to switch to the map view.

The map label for this gene is 17546339

Identifier: 17546339

GI number: 17546339

Start: 1738958

End: 1739200

Strand: Reverse

Name: 17546339

Synonym: RSc1620

Alternate gene names: NA

Gene position: 1739200-1738958 (Counterclockwise)

Preceding gene: 17546341

Following gene: 17546337

Centisome position: 46.8

GC content: 69.14

Gene sequence:

>243_bases
TTGCCCTATTCCACCCTCCGCGCCTCGGGACGTGCCCAGACCTCACTGGTCGCACTGATCGCGCTGCTGGCCGTGGCCGC
GCTGCTGCTGGCCATTCCGCGCGTGATCCTGCCCTGGGCGCAATCGTCCGCATCGCCGCATTTCGATCCCGCGCTGTGGG
CCGACTATGCCGGCCCATACGACTTCGCCGCCGCCGTGGTGGCGGTCAGCGCGGTCGTCATCTATCTGCTCCGGCGCCGA
TAG

Upstream 100 bases:

>100_bases
ACGGACAGAACTTTGTAGGAAAATGGCCGACAAATATGAATTGCAAACTTTCGCTGCAGCGGCGCCTGACGGCCGCCCGG
CGAATCCACCAGGACCCGCC

Downstream 100 bases:

>100_bases
CGCATCGGCTCAGCGTGCCAGGGCGCGCGCGCACTCGGCCACCAGGCCCGGGCCGCGGTAGATCAGCCCCGTGTAGAGCT
GCACCAGCTGCGCGCCGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 80; Mature: 79

Protein sequence:

>80_residues
MPYSTLRASGRAQTSLVALIALLAVAALLLAIPRVILPWAQSSASPHFDPALWADYAGPYDFAAAVVAVSAVVIYLLRRR

Sequences:

>Translated_80_residues
MPYSTLRASGRAQTSLVALIALLAVAALLLAIPRVILPWAQSSASPHFDPALWADYAGPYDFAAAVVAVSAVVIYLLRRR
>Mature_79_residues
PYSTLRASGRAQTSLVALIALLAVAALLLAIPRVILPWAQSSASPHFDPALWADYAGPYDFAAAVVAVSAVVIYLLRRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8536; Mature: 8405

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYSTLRASGRAQTSLVALIALLAVAALLLAIPRVILPWAQSSASPHFDPALWADYAGPY
CCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCH
DFAAAVVAVSAVVIYLLRRR
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PYSTLRASGRAQTSLVALIALLAVAALLLAIPRVILPWAQSSASPHFDPALWADYAGPY
CCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCH
DFAAAVVAVSAVVIYLLRRR
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA