Click here to switch to the map view.

The map label for this gene is 17546323

Identifier: 17546323

GI number: 17546323

Start: 1724424

End: 1724981

Strand: Reverse

Name: 17546323

Synonym: RSc1604

Alternate gene names: NA

Gene position: 1724981-1724424 (Counterclockwise)

Preceding gene: 17546324

Following gene: 17546318

Centisome position: 46.42

GC content: 68.82

Gene sequence:

>558_bases
ATGTCCCGCGAAGCCCTGGCCAGACGCAGCCTGATTGTCCTGGCCGCCTTGATCCTGCTGTTCGAAGAGTGGATCTGGAA
CGCCATGCTCCGCGCCACCGCGCGACTAGTGGCGCATCCGTGGGTGCAAGCGGCCGAGCGGCGCATGGCGGAACTGGAGC
CGATCGAAGCACTCTGCGCCTTCGTGCTGCCGATGCTGGCGCTGCTGCCCTTCAAGCTCGCCGCAGTCTATATGCTGGCG
CGCGGCCATTTCCTCGGGGGGGCTGCGGTGCTGGTGCTGGCAAAGGTCGTCAGTACGACGCTGGGCGCGCGCATCTATGT
CGTGGTGCGGCCGCAGTTGCAGCAGATCAGCTGGTATGTGCGGCTGGAATCGCGCTTCCTGGACTGGAAGCATCGTGTTG
TCGCGGCACTGCGCGCCACGCCGACCTGGCAGGCGCTGCAAGCCCGCCTCGCCGCCTGGCGCGTGCAGCGCCACGGCCTG
CTGCGCCAGGGGTGGCGCCGGCTGGTGGCCGTGCTGCGCCTGATGCGCCGGCACCGCACCGCCAATCCACCGCACTGA

Upstream 100 bases:

>100_bases
GCGTATGCCGCCATACCCGTCACATTGCGAACTTTTGCGAGGCTCGAACGCTCCATTCTGTATTGCGGCATGCCGCCCCC
CCCCCCCCGGACCGACCCCG

Downstream 100 bases:

>100_bases
TCCGCCGCCAAATCAAAAGAGCCGCCCATGGGAGCGGCTCTTTCTTTGTCAGCCAGGGCTCAAGGTCGATTCGAAAACCT
GGCGGTTAATTGCATTTCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 185; Mature: 184

Protein sequence:

>185_residues
MSREALARRSLIVLAALILLFEEWIWNAMLRATARLVAHPWVQAAERRMAELEPIEALCAFVLPMLALLPFKLAAVYMLA
RGHFLGGAAVLVLAKVVSTTLGARIYVVVRPQLQQISWYVRLESRFLDWKHRVVAALRATPTWQALQARLAAWRVQRHGL
LRQGWRRLVAVLRLMRRHRTANPPH

Sequences:

>Translated_185_residues
MSREALARRSLIVLAALILLFEEWIWNAMLRATARLVAHPWVQAAERRMAELEPIEALCAFVLPMLALLPFKLAAVYMLA
RGHFLGGAAVLVLAKVVSTTLGARIYVVVRPQLQQISWYVRLESRFLDWKHRVVAALRATPTWQALQARLAAWRVQRHGL
LRQGWRRLVAVLRLMRRHRTANPPH
>Mature_184_residues
SREALARRSLIVLAALILLFEEWIWNAMLRATARLVAHPWVQAAERRMAELEPIEALCAFVLPMLALLPFKLAAVYMLAR
GHFLGGAAVLVLAKVVSTTLGARIYVVVRPQLQQISWYVRLESRFLDWKHRVVAALRATPTWQALQARLAAWRVQRHGLL
RQGWRRLVAVLRLMRRHRTANPPH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21246; Mature: 21115

Theoretical pI: Translated: 12.36; Mature: 12.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSREALARRSLIVLAALILLFEEWIWNAMLRATARLVAHPWVQAAERRMAELEPIEALCA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
FVLPMLALLPFKLAAVYMLARGHFLGGAAVLVLAKVVSTTLGARIYVVVRPQLQQISWYV
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHH
RLESRFLDWKHRVVAALRATPTWQALQARLAAWRVQRHGLLRQGWRRLVAVLRLMRRHRT
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ANPPH
CCCCC
>Mature Secondary Structure 
SREALARRSLIVLAALILLFEEWIWNAMLRATARLVAHPWVQAAERRMAELEPIEALCA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
FVLPMLALLPFKLAAVYMLARGHFLGGAAVLVLAKVVSTTLGARIYVVVRPQLQQISWYV
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHH
RLESRFLDWKHRVVAALRATPTWQALQARLAAWRVQRHGLLRQGWRRLVAVLRLMRRHRT
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ANPPH
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA