| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is yeaD [C]
Identifier: 17546304
GI number: 17546304
Start: 1700692
End: 1701630
Strand: Reverse
Name: yeaD [C]
Synonym: RSc1585
Alternate gene names: 17546304
Gene position: 1701630-1700692 (Counterclockwise)
Preceding gene: 17546308
Following gene: 17546288
Centisome position: 45.79
GC content: 69.86
Gene sequence:
>939_bases ATGCTCGACCTTCCGACTGCCCGCTTCCAAGAACATACCCTCGTGCGCATCGGCGACGACCGCACCGGTGGCTCCATGCT GCTGCTCGCGCCCGAAGCCGGCGGCCGGCTGGTGCGCTGGCGCCATCGCGGCGAAGACATCCTGTACTGGCCGAACCCCG CCGACTGGTCGACCCCCGCGAAGATCCGCGGCGGCAATCCGGTGCTGTTTCCGTTCATCGGCCGGCACTTCGTCGACGGC GAGCCGGGCCGCTGGCGCGATGCCGGCGGCCAGGTCCATGCGCTGCCCCAGCACGGCTTCGCGCGCGACCTGCCGTTCGA AGTGGAGAGCGCCGACCGCTCACACATCGTCCTGCTGCTGCGCGACGGACCGCAGACGCGCGCCGGCTATCCCTTCGCGT TCGAGTTCCGGGTCAGCTACCGGCTGCTCGAAGACGGGCTGGAAGCGACGTTCGCCATCAAGCATGCTGCCGAAGGCGAC ACGCATGCGCCAATGCCCTTCTATGCCGGGCACCACTTCTATTTCGCGCTGCCCGCCGTGCTGCGCCACGCGGCGACATT GCAGATGCCGCCCTCGCGGCTGTCGCGGCAGCTGGCGGACGGCAGCCTCGACGCGCCCCAGCCCGGACACACGCTCTACA CGCTCGACAACCCCGCGCTGCAGGACCGCTACCACCTGCTCGACGCCGCTGGTGCGGCGGTGCTCGATATCCCGCCCTAT CCCGACGCGCCCCTGGGCCGCCGCATCCGCATCGAAATCGACGGCGCACTGATGCCGTGGCACGCCATCACCACCTGGAC GGAAAGCGCGACCTCCGACTTCTATTGCATCGAACCGTGGATGGGCCTGCCCAACGCGATCCACCACGGCGAGGGCCTGC ACCTGCTGGCACCCGGCGACACGCGGCAAGCGACCTGCCGGCTGCGGGTCGTGCGCTGA
Upstream 100 bases:
>100_bases GGCTCGATACAAAGACATGGTTTTCCTCCCGGCAAAACGCATCGACAATCTAGACCGTAGTACGCGATTCCCATACCAAC AAGGCACCGCCTCCGCTGCC
Downstream 100 bases:
>100_bases GCCTCTTCCTGTCCGGGTCTGCTGCACAGTGCCCTGGCGCACTTCGACCGCGCCCGCCGCTCATCGCTGCCGCAAACGGA CAGCAGGCGCCAGGCTGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: Galactose Mutarotase-Like Protein; Aldose 1-Epimerase Family Protein; Galactose Mutarotase; Galactose Mutarotase ; Aldose 1-Epimerase Subfamily Protein; Aldose 1-Epimerase Subfamily; Aldose 1-Epimerase/Galactose Mutarotase; LacX Protein; Aldose-1 Epimerase; Galactose Mutarotase-Related; Aldose Epimerase; Galactose Mutarotase-Like; Aldose Epimerase Or Galactose Mutarotase
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MLDLPTARFQEHTLVRIGDDRTGGSMLLLAPEAGGRLVRWRHRGEDILYWPNPADWSTPAKIRGGNPVLFPFIGRHFVDG EPGRWRDAGGQVHALPQHGFARDLPFEVESADRSHIVLLLRDGPQTRAGYPFAFEFRVSYRLLEDGLEATFAIKHAAEGD THAPMPFYAGHHFYFALPAVLRHAATLQMPPSRLSRQLADGSLDAPQPGHTLYTLDNPALQDRYHLLDAAGAAVLDIPPY PDAPLGRRIRIEIDGALMPWHAITTWTESATSDFYCIEPWMGLPNAIHHGEGLHLLAPGDTRQATCRLRVVR
Sequences:
>Translated_312_residues MLDLPTARFQEHTLVRIGDDRTGGSMLLLAPEAGGRLVRWRHRGEDILYWPNPADWSTPAKIRGGNPVLFPFIGRHFVDG EPGRWRDAGGQVHALPQHGFARDLPFEVESADRSHIVLLLRDGPQTRAGYPFAFEFRVSYRLLEDGLEATFAIKHAAEGD THAPMPFYAGHHFYFALPAVLRHAATLQMPPSRLSRQLADGSLDAPQPGHTLYTLDNPALQDRYHLLDAAGAAVLDIPPY PDAPLGRRIRIEIDGALMPWHAITTWTESATSDFYCIEPWMGLPNAIHHGEGLHLLAPGDTRQATCRLRVVR >Mature_312_residues MLDLPTARFQEHTLVRIGDDRTGGSMLLLAPEAGGRLVRWRHRGEDILYWPNPADWSTPAKIRGGNPVLFPFIGRHFVDG EPGRWRDAGGQVHALPQHGFARDLPFEVESADRSHIVLLLRDGPQTRAGYPFAFEFRVSYRLLEDGLEATFAIKHAAEGD THAPMPFYAGHHFYFALPAVLRHAATLQMPPSRLSRQLADGSLDAPQPGHTLYTLDNPALQDRYHLLDAAGAAVLDIPPY PDAPLGRRIRIEIDGALMPWHAITTWTESATSDFYCIEPWMGLPNAIHHGEGLHLLAPGDTRQATCRLRVVR
Specific function: Unknown
COG id: COG2017
COG function: function code G; Galactose mutarotase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 560 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34782; Mature: 34782
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDLPTARFQEHTLVRIGDDRTGGSMLLLAPEAGGRLVRWRHRGEDILYWPNPADWSTPA CCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCEEEEEECCCEEEECCCCCCCCCCC KIRGGNPVLFPFIGRHFVDGEPGRWRDAGGQVHALPQHGFARDLPFEVESADRSHIVLLL EECCCCEEEECCCCCEECCCCCCCEECCCCEEEEECCCCCCCCCCEEECCCCCCEEEEEE RDGPQTRAGYPFAFEFRVSYRLLEDGLEATFAIKHAAEGDTHAPMPFYAGHHFYFALPAV CCCCCCCCCCCEEEEEEEEEHHHHCCCCEEEEEEECCCCCCCCCCCEECCCHHEHHHHHH LRHAATLQMPPSRLSRQLADGSLDAPQPGHTLYTLDNPALQDRYHLLDAAGAAVLDIPPY HHHHHCCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCEEEECCCC PDAPLGRRIRIEIDGALMPWHAITTWTESATSDFYCIEPWMGLPNAIHHGEGLHLLAPGD CCCCCCCEEEEEECCEEECCEEEEEECCCCCCCEEEECCCCCCCCHHCCCCCEEEECCCC TRQATCRLRVVR CCCEEEEEEEEC >Mature Secondary Structure MLDLPTARFQEHTLVRIGDDRTGGSMLLLAPEAGGRLVRWRHRGEDILYWPNPADWSTPA CCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCEEEEEECCCEEEECCCCCCCCCCC KIRGGNPVLFPFIGRHFVDGEPGRWRDAGGQVHALPQHGFARDLPFEVESADRSHIVLLL EECCCCEEEECCCCCEECCCCCCCEECCCCEEEEECCCCCCCCCCEEECCCCCCEEEEEE RDGPQTRAGYPFAFEFRVSYRLLEDGLEATFAIKHAAEGDTHAPMPFYAGHHFYFALPAV CCCCCCCCCCCEEEEEEEEEHHHHCCCCEEEEEEECCCCCCCCCCCEECCCHHEHHHHHH LRHAATLQMPPSRLSRQLADGSLDAPQPGHTLYTLDNPALQDRYHLLDAAGAAVLDIPPY HHHHHCCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCEEEECCCC PDAPLGRRIRIEIDGALMPWHAITTWTESATSDFYCIEPWMGLPNAIHHGEGLHLLAPGD CCCCCCCEEEEEECCEEECCEEEEEECCCCCCCEEEECCCCCCCCHHCCCCCEEEECCCC TRQATCRLRVVR CCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA