Definition Ralstonia solanacearum GMI1000, complete genome.
Accession NC_003295
Length 3,716,413

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The map label for this gene is yeaD [C]

Identifier: 17546304

GI number: 17546304

Start: 1700692

End: 1701630

Strand: Reverse

Name: yeaD [C]

Synonym: RSc1585

Alternate gene names: 17546304

Gene position: 1701630-1700692 (Counterclockwise)

Preceding gene: 17546308

Following gene: 17546288

Centisome position: 45.79

GC content: 69.86

Gene sequence:

>939_bases
ATGCTCGACCTTCCGACTGCCCGCTTCCAAGAACATACCCTCGTGCGCATCGGCGACGACCGCACCGGTGGCTCCATGCT
GCTGCTCGCGCCCGAAGCCGGCGGCCGGCTGGTGCGCTGGCGCCATCGCGGCGAAGACATCCTGTACTGGCCGAACCCCG
CCGACTGGTCGACCCCCGCGAAGATCCGCGGCGGCAATCCGGTGCTGTTTCCGTTCATCGGCCGGCACTTCGTCGACGGC
GAGCCGGGCCGCTGGCGCGATGCCGGCGGCCAGGTCCATGCGCTGCCCCAGCACGGCTTCGCGCGCGACCTGCCGTTCGA
AGTGGAGAGCGCCGACCGCTCACACATCGTCCTGCTGCTGCGCGACGGACCGCAGACGCGCGCCGGCTATCCCTTCGCGT
TCGAGTTCCGGGTCAGCTACCGGCTGCTCGAAGACGGGCTGGAAGCGACGTTCGCCATCAAGCATGCTGCCGAAGGCGAC
ACGCATGCGCCAATGCCCTTCTATGCCGGGCACCACTTCTATTTCGCGCTGCCCGCCGTGCTGCGCCACGCGGCGACATT
GCAGATGCCGCCCTCGCGGCTGTCGCGGCAGCTGGCGGACGGCAGCCTCGACGCGCCCCAGCCCGGACACACGCTCTACA
CGCTCGACAACCCCGCGCTGCAGGACCGCTACCACCTGCTCGACGCCGCTGGTGCGGCGGTGCTCGATATCCCGCCCTAT
CCCGACGCGCCCCTGGGCCGCCGCATCCGCATCGAAATCGACGGCGCACTGATGCCGTGGCACGCCATCACCACCTGGAC
GGAAAGCGCGACCTCCGACTTCTATTGCATCGAACCGTGGATGGGCCTGCCCAACGCGATCCACCACGGCGAGGGCCTGC
ACCTGCTGGCACCCGGCGACACGCGGCAAGCGACCTGCCGGCTGCGGGTCGTGCGCTGA

Upstream 100 bases:

>100_bases
GGCTCGATACAAAGACATGGTTTTCCTCCCGGCAAAACGCATCGACAATCTAGACCGTAGTACGCGATTCCCATACCAAC
AAGGCACCGCCTCCGCTGCC

Downstream 100 bases:

>100_bases
GCCTCTTCCTGTCCGGGTCTGCTGCACAGTGCCCTGGCGCACTTCGACCGCGCCCGCCGCTCATCGCTGCCGCAAACGGA
CAGCAGGCGCCAGGCTGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: Galactose Mutarotase-Like Protein; Aldose 1-Epimerase Family Protein; Galactose Mutarotase; Galactose Mutarotase ; Aldose 1-Epimerase Subfamily Protein; Aldose 1-Epimerase Subfamily; Aldose 1-Epimerase/Galactose Mutarotase; LacX Protein; Aldose-1 Epimerase; Galactose Mutarotase-Related; Aldose Epimerase; Galactose Mutarotase-Like; Aldose Epimerase Or Galactose Mutarotase

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MLDLPTARFQEHTLVRIGDDRTGGSMLLLAPEAGGRLVRWRHRGEDILYWPNPADWSTPAKIRGGNPVLFPFIGRHFVDG
EPGRWRDAGGQVHALPQHGFARDLPFEVESADRSHIVLLLRDGPQTRAGYPFAFEFRVSYRLLEDGLEATFAIKHAAEGD
THAPMPFYAGHHFYFALPAVLRHAATLQMPPSRLSRQLADGSLDAPQPGHTLYTLDNPALQDRYHLLDAAGAAVLDIPPY
PDAPLGRRIRIEIDGALMPWHAITTWTESATSDFYCIEPWMGLPNAIHHGEGLHLLAPGDTRQATCRLRVVR

Sequences:

>Translated_312_residues
MLDLPTARFQEHTLVRIGDDRTGGSMLLLAPEAGGRLVRWRHRGEDILYWPNPADWSTPAKIRGGNPVLFPFIGRHFVDG
EPGRWRDAGGQVHALPQHGFARDLPFEVESADRSHIVLLLRDGPQTRAGYPFAFEFRVSYRLLEDGLEATFAIKHAAEGD
THAPMPFYAGHHFYFALPAVLRHAATLQMPPSRLSRQLADGSLDAPQPGHTLYTLDNPALQDRYHLLDAAGAAVLDIPPY
PDAPLGRRIRIEIDGALMPWHAITTWTESATSDFYCIEPWMGLPNAIHHGEGLHLLAPGDTRQATCRLRVVR
>Mature_312_residues
MLDLPTARFQEHTLVRIGDDRTGGSMLLLAPEAGGRLVRWRHRGEDILYWPNPADWSTPAKIRGGNPVLFPFIGRHFVDG
EPGRWRDAGGQVHALPQHGFARDLPFEVESADRSHIVLLLRDGPQTRAGYPFAFEFRVSYRLLEDGLEATFAIKHAAEGD
THAPMPFYAGHHFYFALPAVLRHAATLQMPPSRLSRQLADGSLDAPQPGHTLYTLDNPALQDRYHLLDAAGAAVLDIPPY
PDAPLGRRIRIEIDGALMPWHAITTWTESATSDFYCIEPWMGLPNAIHHGEGLHLLAPGDTRQATCRLRVVR

Specific function: Unknown

COG id: COG2017

COG function: function code G; Galactose mutarotase and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 560 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34782; Mature: 34782

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDLPTARFQEHTLVRIGDDRTGGSMLLLAPEAGGRLVRWRHRGEDILYWPNPADWSTPA
CCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCEEEEEECCCEEEECCCCCCCCCCC
KIRGGNPVLFPFIGRHFVDGEPGRWRDAGGQVHALPQHGFARDLPFEVESADRSHIVLLL
EECCCCEEEECCCCCEECCCCCCCEECCCCEEEEECCCCCCCCCCEEECCCCCCEEEEEE
RDGPQTRAGYPFAFEFRVSYRLLEDGLEATFAIKHAAEGDTHAPMPFYAGHHFYFALPAV
CCCCCCCCCCCEEEEEEEEEHHHHCCCCEEEEEEECCCCCCCCCCCEECCCHHEHHHHHH
LRHAATLQMPPSRLSRQLADGSLDAPQPGHTLYTLDNPALQDRYHLLDAAGAAVLDIPPY
HHHHHCCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCEEEECCCC
PDAPLGRRIRIEIDGALMPWHAITTWTESATSDFYCIEPWMGLPNAIHHGEGLHLLAPGD
CCCCCCCEEEEEECCEEECCEEEEEECCCCCCCEEEECCCCCCCCHHCCCCCEEEECCCC
TRQATCRLRVVR
CCCEEEEEEEEC
>Mature Secondary Structure
MLDLPTARFQEHTLVRIGDDRTGGSMLLLAPEAGGRLVRWRHRGEDILYWPNPADWSTPA
CCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCEEEEEECCCEEEECCCCCCCCCCC
KIRGGNPVLFPFIGRHFVDGEPGRWRDAGGQVHALPQHGFARDLPFEVESADRSHIVLLL
EECCCCEEEECCCCCEECCCCCCCEECCCCEEEEECCCCCCCCCCEEECCCCCCEEEEEE
RDGPQTRAGYPFAFEFRVSYRLLEDGLEATFAIKHAAEGDTHAPMPFYAGHHFYFALPAV
CCCCCCCCCCCEEEEEEEEEHHHHCCCCEEEEEEECCCCCCCCCCCEECCCHHEHHHHHH
LRHAATLQMPPSRLSRQLADGSLDAPQPGHTLYTLDNPALQDRYHLLDAAGAAVLDIPPY
HHHHHCCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCEEEECCCC
PDAPLGRRIRIEIDGALMPWHAITTWTESATSDFYCIEPWMGLPNAIHHGEGLHLLAPGD
CCCCCCCEEEEEECCEEECCEEEEEECCCCCCCEEEECCCCCCCCHHCCCCCEEEECCCC
TRQATCRLRVVR
CCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA