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The map label for this gene is 17546276

Identifier: 17546276

GI number: 17546276

Start: 1673459

End: 1673848

Strand: Reverse

Name: 17546276

Synonym: RSc1557

Alternate gene names: NA

Gene position: 1673848-1673459 (Counterclockwise)

Preceding gene: 17546277

Following gene: 17546275

Centisome position: 45.04

GC content: 69.74

Gene sequence:

>390_bases
ATGACGCCCGCCGCCCCCGTCCCGCATTCGCGCATCCTGCACGGCTTGAGCGCGGGCAGCCTGATCGCGCTGATCGCGCT
GTGCATGGCCTGGGAGCTGTGGCTCGCGCCGTTGCGCCCGGGCGGCTCGTGGCTGGCGTTGAAGGCGCTGCTGCTGACCT
GGCCACTGCCTGGGGTGCTGCGCCGCAATCGCTACACGATGCAGTGGGCGTCCATGTTCATCCTGCTGTTCTTCACGGAA
GGCATCGTGCGCGCGACGTCCGACCCGGGCGCCTCGCGCGCGCTGGCATGGGCCGAAGTCGTGCTCAGCCTGGTGTTCTT
CTTCGCCACCATCTTCTACCTGCGTCCGTTCAAGCGCGCGGCCAAGGCGCGCGCCCGGCACGACGCCTGA

Upstream 100 bases:

>100_bases
TGGCGCATCGCGGCGACACCGCGCCGCTCACCGCCATCGAACGCACGCTGGCCGTGGCGATGGGCCGACGGCTGGCGCAG
ACCGCGCTCAGGCTCACCGC

Downstream 100 bases:

>100_bases
CCCTCGCCCGCCATGACCCACGATGCCTTCCTGCAGGCCTGCACCGACGCCATCGGCGGCGCGCACGTCCTGACCGCGCC
GGAAGACCAGGCACCCTATC

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Lipoprotein

Number of amino acids: Translated: 129; Mature: 128

Protein sequence:

>129_residues
MTPAAPVPHSRILHGLSAGSLIALIALCMAWELWLAPLRPGGSWLALKALLLTWPLPGVLRRNRYTMQWASMFILLFFTE
GIVRATSDPGASRALAWAEVVLSLVFFFATIFYLRPFKRAAKARARHDA

Sequences:

>Translated_129_residues
MTPAAPVPHSRILHGLSAGSLIALIALCMAWELWLAPLRPGGSWLALKALLLTWPLPGVLRRNRYTMQWASMFILLFFTE
GIVRATSDPGASRALAWAEVVLSLVFFFATIFYLRPFKRAAKARARHDA
>Mature_128_residues
TPAAPVPHSRILHGLSAGSLIALIALCMAWELWLAPLRPGGSWLALKALLLTWPLPGVLRRNRYTMQWASMFILLFFTEG
IVRATSDPGASRALAWAEVVLSLVFFFATIFYLRPFKRAAKARARHDA

Specific function: Unknown

COG id: COG3308

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14360; Mature: 14229

Theoretical pI: Translated: 11.91; Mature: 11.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPAAPVPHSRILHGLSAGSLIALIALCMAWELWLAPLRPGGSWLALKALLLTWPLPGVL
CCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHH
RRNRYTMQWASMFILLFFTEGIVRATSDPGASRALAWAEVVLSLVFFFATIFYLRPFKRA
HCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKARARHDA
HHHHHCCCC
>Mature Secondary Structure 
TPAAPVPHSRILHGLSAGSLIALIALCMAWELWLAPLRPGGSWLALKALLLTWPLPGVL
CCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHH
RRNRYTMQWASMFILLFFTEGIVRATSDPGASRALAWAEVVLSLVFFFATIFYLRPFKRA
HCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKARARHDA
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA