| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is phoR [H]
Identifier: 17546254
GI number: 17546254
Start: 1638718
End: 1640049
Strand: Direct
Name: phoR [H]
Synonym: RSc1535
Alternate gene names: 17546254
Gene position: 1638718-1640049 (Clockwise)
Preceding gene: 17546253
Following gene: 17546256
Centisome position: 44.09
GC content: 66.97
Gene sequence:
>1332_bases ATGAACATCATCTGGACCCGCTTCGTCGTCGCCGTTGCCCTGATGGGGCTGGTGACGCTGGGGTTGTACTTCTTTGTCGG CCACGCGGTCGCCTTTGCGGCGTTCAGCGCGATGCTGCTGACGATGCTGCTGTACTACGTCTATCAGCTCCAGCGGCTGT GGCGCGTGCTGGAGTCGCCTGCCTATGGCGAGATTCCCAGCGCGCTCGGCCTGTGGGGCGAGGTGTATTACCGCCTACAC CGGCTGATGAAGGGCTGGCGCACGCAGGTGCTGCAGGTCGAGCAGCAGCACAGCCGCTTCATCCAGGCGATTCAGGCCTC GCCCAACGGGGTGCTGATGCTCGACGGCGAAGACCAGATCGAGTGGTGTAACGCCGTCGCCGAGGAGCACTTCGGCCTGT CTGCCAAGCGCGACCTGCGCCAGCGCATCACCCACCTGATCCGCCGACCGGAATTCGTCCGCTATCTTGCGCGCGGCGAG TTCGAGGAGCCCCTCACCATGCGTGACATGGGCCCGCACAAGCAGAGTATCGTGTCCGCCCAGGTGCTGCCCTACGGCGA GGACCGCAAGCTGCTGGTGTCGCAGGACATCACCAAGCTCGAGAACACCGAGGCGATGCGGCGCGATTTCGTCGCCAACG TTTCACACGAACTGAAGACGCCGCTGACGGTGCTGTCCGGTTTTCTCGAGACCGTGCGCGACCTGCCGCTGTCAGAGGAC GACAAGCGGCGCTACCTGGACATGATGCACGTGCAGGCCACGCGCATGCAGCACTTGGTGGAGGACCTGCTGGCGCTGGC CACGCTGGAGGGCAATTCCGAGCCGCCCTCGATCACGCCGGTGCCGATGCAGCGCGTGATGCTCCAGCTGCAGCACGATG CCGAGGCGCTGTCCGCCGGCCGGCACGCGATCAGCATGACCTGCGATGCGTCGGTGAGCGTGTGCGGGGCCGAGCTGGAG CTGCTGTCGGCCTTCAGCAACCTGGTCTCCAATGCCATCCGCTACACGCCCGAGGGCGGCCGGATCAGCCTGGACTGGTC GGCCAGGGAGGGGCACGCGGTGTTTTCCGTGACCGATACCGGCATCGGCATCGCGCCCGAACATATCCCGCGCCTGACCG AGCGCTTCTACCGGGTGGATCGCAGCCGCTCGCGCGATACCGGCGGCACCGGCCTCGGCCTGGCGATCGTCAAGCACGTG CTGTCGCGGCACGGAGCCGACCTGCAGGTCGTCAGCGAGCGCGGCAAGGGTAGTACGTTCCGCGCGAGCTTTCCGCCGGA GCGCACGGTGGTGCGCGGCACGGGGGACTCAGGCGCCGAGCGCGCGGCCTGA
Upstream 100 bases:
>100_bases ATCCCGGACAGTAACCCGGCATCGACACTTGTGGGGACCCCGTACCCATCGTCGGCGGGGTCTGTTCCGCACCCGCAGGT CCAGCGCTTAGAATGGCCTC
Downstream 100 bases:
>100_bases CGGCTTCGGGCTTTTCCGCCCTTCAAGCAAAAACGCACGCCGTTCGGGCGTGCGTTTTTTGTTGGCGGGTCGGGGCGTTC AGCCCGCGGAGATTTCCGCG
Product: phosphate regulon two-component sensor kinase transcription regulator protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 443; Mature: 443
Protein sequence:
>443_residues MNIIWTRFVVAVALMGLVTLGLYFFVGHAVAFAAFSAMLLTMLLYYVYQLQRLWRVLESPAYGEIPSALGLWGEVYYRLH RLMKGWRTQVLQVEQQHSRFIQAIQASPNGVLMLDGEDQIEWCNAVAEEHFGLSAKRDLRQRITHLIRRPEFVRYLARGE FEEPLTMRDMGPHKQSIVSAQVLPYGEDRKLLVSQDITKLENTEAMRRDFVANVSHELKTPLTVLSGFLETVRDLPLSED DKRRYLDMMHVQATRMQHLVEDLLALATLEGNSEPPSITPVPMQRVMLQLQHDAEALSAGRHAISMTCDASVSVCGAELE LLSAFSNLVSNAIRYTPEGGRISLDWSAREGHAVFSVTDTGIGIAPEHIPRLTERFYRVDRSRSRDTGGTGLGLAIVKHV LSRHGADLQVVSERGKGSTFRASFPPERTVVRGTGDSGAERAA
Sequences:
>Translated_443_residues MNIIWTRFVVAVALMGLVTLGLYFFVGHAVAFAAFSAMLLTMLLYYVYQLQRLWRVLESPAYGEIPSALGLWGEVYYRLH RLMKGWRTQVLQVEQQHSRFIQAIQASPNGVLMLDGEDQIEWCNAVAEEHFGLSAKRDLRQRITHLIRRPEFVRYLARGE FEEPLTMRDMGPHKQSIVSAQVLPYGEDRKLLVSQDITKLENTEAMRRDFVANVSHELKTPLTVLSGFLETVRDLPLSED DKRRYLDMMHVQATRMQHLVEDLLALATLEGNSEPPSITPVPMQRVMLQLQHDAEALSAGRHAISMTCDASVSVCGAELE LLSAFSNLVSNAIRYTPEGGRISLDWSAREGHAVFSVTDTGIGIAPEHIPRLTERFYRVDRSRSRDTGGTGLGLAIVKHV LSRHGADLQVVSERGKGSTFRASFPPERTVVRGTGDSGAERAA >Mature_443_residues MNIIWTRFVVAVALMGLVTLGLYFFVGHAVAFAAFSAMLLTMLLYYVYQLQRLWRVLESPAYGEIPSALGLWGEVYYRLH RLMKGWRTQVLQVEQQHSRFIQAIQASPNGVLMLDGEDQIEWCNAVAEEHFGLSAKRDLRQRITHLIRRPEFVRYLARGE FEEPLTMRDMGPHKQSIVSAQVLPYGEDRKLLVSQDITKLENTEAMRRDFVANVSHELKTPLTVLSGFLETVRDLPLSED DKRRYLDMMHVQATRMQHLVEDLLALATLEGNSEPPSITPVPMQRVMLQLQHDAEALSAGRHAISMTCDASVSVCGAELE LLSAFSNLVSNAIRYTPEGGRISLDWSAREGHAVFSVTDTGIGIAPEHIPRLTERFYRVDRSRSRDTGGTGLGLAIVKHV LSRHGADLQVVSERGKGSTFRASFPPERTVVRGTGDSGAERAA
Specific function: Member of the two-component regulatory system phoR/phoB involved in the phosphate regulon genes expression. PhoR may function as a membrane-associated protein kinase that phosphorylates phoB in response to environmental signals [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI1786600, Length=411, Percent_Identity=37.4695863746959, Blast_Score=263, Evalue=2e-71, Organism=Escherichia coli, GI1788393, Length=274, Percent_Identity=29.1970802919708, Blast_Score=117, Evalue=1e-27, Organism=Escherichia coli, GI1786783, Length=240, Percent_Identity=34.1666666666667, Blast_Score=116, Evalue=2e-27, Organism=Escherichia coli, GI145693157, Length=360, Percent_Identity=27.7777777777778, Blast_Score=106, Evalue=3e-24, Organism=Escherichia coli, GI48994928, Length=380, Percent_Identity=25.7894736842105, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1789149, Length=241, Percent_Identity=30.7053941908714, Blast_Score=97, Evalue=3e-21, Organism=Escherichia coli, GI1790861, Length=203, Percent_Identity=34.4827586206897, Blast_Score=92, Evalue=8e-20, Organism=Escherichia coli, GI87082128, Length=233, Percent_Identity=28.3261802575107, Blast_Score=88, Evalue=9e-19, Organism=Escherichia coli, GI1788713, Length=267, Percent_Identity=26.9662921348315, Blast_Score=86, Evalue=4e-18, Organism=Escherichia coli, GI1790346, Length=215, Percent_Identity=28.3720930232558, Blast_Score=86, Evalue=4e-18, Organism=Escherichia coli, GI1789403, Length=271, Percent_Identity=29.520295202952, Blast_Score=86, Evalue=5e-18, Organism=Escherichia coli, GI1790436, Length=248, Percent_Identity=27.4193548387097, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1787894, Length=222, Percent_Identity=27.4774774774775, Blast_Score=76, Evalue=5e-15, Organism=Escherichia coli, GI87081816, Length=233, Percent_Identity=27.4678111587983, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1789808, Length=235, Percent_Identity=31.9148936170213, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1788549, Length=354, Percent_Identity=22.316384180791, Blast_Score=66, Evalue=5e-12, Organism=Escherichia coli, GI1788279, Length=216, Percent_Identity=25.462962962963, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1786912, Length=225, Percent_Identity=24.8888888888889, Blast_Score=63, Evalue=5e-11, Organism=Escherichia coli, GI1790551, Length=213, Percent_Identity=30.0469483568075, Blast_Score=62, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR021766 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR014310 [H]
Pfam domain/function: PF11808 DUF3329; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 49670; Mature: 49670
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIIWTRFVVAVALMGLVTLGLYFFVGHAVAFAAFSAMLLTMLLYYVYQLQRLWRVLESP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC AYGEIPSALGLWGEVYYRLHRLMKGWRTQVLQVEQQHSRFIQAIQASPNGVLMLDGEDQI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHH EWCNAVAEEHFGLSAKRDLRQRITHLIRRPEFVRYLARGEFEEPLTMRDMGPHKQSIVSA HHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCHHCCCCCHHHHHHH QVLPYGEDRKLLVSQDITKLENTEAMRRDFVANVSHELKTPLTVLSGFLETVRDLPLSED HCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCC DKRRYLDMMHVQATRMQHLVEDLLALATLEGNSEPPSITPVPMQRVMLQLQHDAEALSAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC RHAISMTCDASVSVCGAELELLSAFSNLVSNAIRYTPEGGRISLDWSAREGHAVFSVTDT CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEECCCCCCEEEEEECC GIGIAPEHIPRLTERFYRVDRSRSRDTGGTGLGLAIVKHVLSRHGADLQVVSERGKGSTF CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCEE RASFPPERTVVRGTGDSGAERAA ECCCCCCCCEEECCCCCCCCCCC >Mature Secondary Structure MNIIWTRFVVAVALMGLVTLGLYFFVGHAVAFAAFSAMLLTMLLYYVYQLQRLWRVLESP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC AYGEIPSALGLWGEVYYRLHRLMKGWRTQVLQVEQQHSRFIQAIQASPNGVLMLDGEDQI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHH EWCNAVAEEHFGLSAKRDLRQRITHLIRRPEFVRYLARGEFEEPLTMRDMGPHKQSIVSA HHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCHHCCCCCHHHHHHH QVLPYGEDRKLLVSQDITKLENTEAMRRDFVANVSHELKTPLTVLSGFLETVRDLPLSED HCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCC DKRRYLDMMHVQATRMQHLVEDLLALATLEGNSEPPSITPVPMQRVMLQLQHDAEALSAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC RHAISMTCDASVSVCGAELELLSAFSNLVSNAIRYTPEGGRISLDWSAREGHAVFSVTDT CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEECCCCCCEEEEEECC GIGIAPEHIPRLTERFYRVDRSRSRDTGGTGLGLAIVKHVLSRHGADLQVVSERGKGSTF CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCEE RASFPPERTVVRGTGDSGAERAA ECCCCCCCCEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10984043; 2115874 [H]