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The map label for this gene is 17546222

Identifier: 17546222

GI number: 17546222

Start: 1608222

End: 1609871

Strand: Direct

Name: 17546222

Synonym: RSc1503

Alternate gene names: NA

Gene position: 1608222-1609871 (Clockwise)

Preceding gene: 17546221

Following gene: 17546228

Centisome position: 43.27

GC content: 70.97

Gene sequence:

>1650_bases
GTGGCGTCCGGTCTCCTGCCGTGGACACAGGAGCGCTTCAAAGCGGCGGTGGCCGAGGCCGCCGCGCAGCCGGATTGCTC
CGCCCGCACGCAGGCGCTGCTGGTCCTGATGCGGGAGGAGCACCCGGCGTATGTCCAATGCAGCGCGGCGGAAGTGGTGC
GCCGGCGCGGCTGGGTGCTGGTCGAACTCGGCAACGCGGGCCTGGAGCCGGCGGCCATGCCCATCGTGCTGGAGGAGCTC
GAGACAGGCCACCAGCCCTACCTCCTCGCCGCCGCGGCGCGCGCGCTGCGTCAGGCGGAGGCGCCCAGCCCCGCGCTGGC
GCCGATCCTGCTGCGAGCGCTCGAGGCGCTGGCGCGCCGCGACGATCTGGTGGACCTGACGGTGTGGGGCGGGACGGCGG
CATCCGACGCCGCCGGCTCGGCACTGGGCGAGGCCCTGGCCACGCTGCGCTGGCTGGCGCCGCAAGCGCATGGCATCCGG
CAGGGTCTGCGAGACCTGGCGGATGGCGCGGCCGGCCCGCTGGCCGAAGACCATCGGCTGGCCGTGCAGGCGGTGCTGGA
CGACATCGCGGCCCGTGACCTGCCGGACAGCAGCGATTGCTGCGCATTGCCCCTGTCCTGGCGCAGGTTTGCATCCGGCG
GCGATGCCGCGGCACCGATCTCCACTGTGTGTTTCGAAGATCAGGACGGCGTCAGCGTTTCCTGGGACCGCCTGTTCCTG
GGCCAGCCGAGCGTCGTCGCGTTCTTTTACACGCGCTGCGACAACGAGCAGAAATGCTCGCTCACCGTCAGCCAGCTGGC
GCAAGTGCAGCGCCTGCTCGTGTCGGCCGGCGCACAGACGTCGGTTCGCCTAGCGGCCATCACCTATGACCCGGACTTCG
ACCTGCCCCACCGGTTGCGTGGCTATGCCGAGAGCCGCAGCCTGGTGCCGGGGGCGCATTGCCGGATGCTCAGGACGACG
CAGGGCAGGGACGCGCTGCAGGACTACTTCACGCTGGGCGTGAACTTTGCCGGGTCCGTGGTGAACCGTCATCGCATCGA
GGTCTTCGTGCTCGATGCATCGGGCAGGATCCGGGCGACCTATCAGCGGCTGGGCTGGGATCCGGTCGAGCTGGTCAACG
AGGTGCAGCGGATCACGAACGCGCCGGAGCGGATCGCCGAAGGGCAGGGCAAGGGTGTGGCGATCACCGGTACGGCCCCC
GGCCTGTGGGCGCTACTGCTGGCGCTGCTGCCCAAATGCCCGATCTGCGGAGCGACCTACCTGAGCAGTTCGGGGCTCCT
TGCCTTGCCGTATCTGTCGGGCTGGCAGCAATCCTGGCCGGCGATCCTGCTGCTGCTGATCATCAATCTGGCCGCGATGG
CATGGTTCGCGCGCTCGCGCAAGCGATGGTGGGCACTGGCGTGGTCCGTTGCCGGCGCGGTCACGCTGATCGGTCCGGGG
CTCGCGCTTGGCCATGCAATGGCGATGGTGCTTGGTGCCGCATTCACCGCTGTCGGATCGCTGCTGGCAGCGGCCGCTGT
CGTACCAGGCATCCGGGGCGGGGGGCGTGGCCCGGGCATCGGCTCCGTCCGGCGCCCGCGCCGCCCGGCCGGGCGGACCG
TTCCGCTTGTGCGGCAGGCAGCCACCGGCGAGTCGCCGCCGCCATCGTGA

Upstream 100 bases:

>100_bases
ACTGCAGGCGCACGTCCAGAAGATCGCCGAAGGCGAGGGCGGCACCGGGCTCCAGGCCGCCGCCGAGCAGTTCAAGATCC
GCTGCAGCTGAGGCGACGCC

Downstream 100 bases:

>100_bases
GTCGATGTCCGTGCGATTGCCGATGCCCCTATCGGCGTGTCGTGACGCGCGAGGCCGGGAGTGGCCCGCAAGCTCGCACG
CACCGGGCCGTCATGTCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 549; Mature: 548

Protein sequence:

>549_residues
MASGLLPWTQERFKAAVAEAAAQPDCSARTQALLVLMREEHPAYVQCSAAEVVRRRGWVLVELGNAGLEPAAMPIVLEEL
ETGHQPYLLAAAARALRQAEAPSPALAPILLRALEALARRDDLVDLTVWGGTAASDAAGSALGEALATLRWLAPQAHGIR
QGLRDLADGAAGPLAEDHRLAVQAVLDDIAARDLPDSSDCCALPLSWRRFASGGDAAAPISTVCFEDQDGVSVSWDRLFL
GQPSVVAFFYTRCDNEQKCSLTVSQLAQVQRLLVSAGAQTSVRLAAITYDPDFDLPHRLRGYAESRSLVPGAHCRMLRTT
QGRDALQDYFTLGVNFAGSVVNRHRIEVFVLDASGRIRATYQRLGWDPVELVNEVQRITNAPERIAEGQGKGVAITGTAP
GLWALLLALLPKCPICGATYLSSSGLLALPYLSGWQQSWPAILLLLIINLAAMAWFARSRKRWWALAWSVAGAVTLIGPG
LALGHAMAMVLGAAFTAVGSLLAAAAVVPGIRGGGRGPGIGSVRRPRRPAGRTVPLVRQAATGESPPPS

Sequences:

>Translated_549_residues
MASGLLPWTQERFKAAVAEAAAQPDCSARTQALLVLMREEHPAYVQCSAAEVVRRRGWVLVELGNAGLEPAAMPIVLEEL
ETGHQPYLLAAAARALRQAEAPSPALAPILLRALEALARRDDLVDLTVWGGTAASDAAGSALGEALATLRWLAPQAHGIR
QGLRDLADGAAGPLAEDHRLAVQAVLDDIAARDLPDSSDCCALPLSWRRFASGGDAAAPISTVCFEDQDGVSVSWDRLFL
GQPSVVAFFYTRCDNEQKCSLTVSQLAQVQRLLVSAGAQTSVRLAAITYDPDFDLPHRLRGYAESRSLVPGAHCRMLRTT
QGRDALQDYFTLGVNFAGSVVNRHRIEVFVLDASGRIRATYQRLGWDPVELVNEVQRITNAPERIAEGQGKGVAITGTAP
GLWALLLALLPKCPICGATYLSSSGLLALPYLSGWQQSWPAILLLLIINLAAMAWFARSRKRWWALAWSVAGAVTLIGPG
LALGHAMAMVLGAAFTAVGSLLAAAAVVPGIRGGGRGPGIGSVRRPRRPAGRTVPLVRQAATGESPPPS
>Mature_548_residues
ASGLLPWTQERFKAAVAEAAAQPDCSARTQALLVLMREEHPAYVQCSAAEVVRRRGWVLVELGNAGLEPAAMPIVLEELE
TGHQPYLLAAAARALRQAEAPSPALAPILLRALEALARRDDLVDLTVWGGTAASDAAGSALGEALATLRWLAPQAHGIRQ
GLRDLADGAAGPLAEDHRLAVQAVLDDIAARDLPDSSDCCALPLSWRRFASGGDAAAPISTVCFEDQDGVSVSWDRLFLG
QPSVVAFFYTRCDNEQKCSLTVSQLAQVQRLLVSAGAQTSVRLAAITYDPDFDLPHRLRGYAESRSLVPGAHCRMLRTTQ
GRDALQDYFTLGVNFAGSVVNRHRIEVFVLDASGRIRATYQRLGWDPVELVNEVQRITNAPERIAEGQGKGVAITGTAPG
LWALLLALLPKCPICGATYLSSSGLLALPYLSGWQQSWPAILLLLIINLAAMAWFARSRKRWWALAWSVAGAVTLIGPGL
ALGHAMAMVLGAAFTAVGSLLAAAAVVPGIRGGGRGPGIGSVRRPRRPAGRTVPLVRQAATGESPPPS

Specific function: Unknown

COG id: COG1999

COG function: function code R; Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58311; Mature: 58179

Theoretical pI: Translated: 8.10; Mature: 8.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASGLLPWTQERFKAAVAEAAAQPDCSARTQALLVLMREEHPAYVQCSAAEVVRRRGWVL
CCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEECHHHHHHHCCCEE
VELGNAGLEPAAMPIVLEELETGHQPYLLAAAARALRQAEAPSPALAPILLRALEALARR
EEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
DDLVDLTVWGGTAASDAAGSALGEALATLRWLAPQAHGIRQGLRDLADGAAGPLAEDHRL
CCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHH
AVQAVLDDIAARDLPDSSDCCALPLSWRRFASGGDAAAPISTVCFEDQDGVSVSWDRLFL
HHHHHHHHHHHCCCCCCCCCEECCHHHHHHCCCCCCCCCHHHEEECCCCCCEEEECEEEC
GQPSVVAFFYTRCDNEQKCSLTVSQLAQVQRLLVSAGAQTSVRLAAITYDPDFDLPHRLR
CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCHHHHH
GYAESRSLVPGAHCRMLRTTQGRDALQDYFTLGVNFAGSVVNRHRIEVFVLDASGRIRAT
HHHHCCCCCCCHHHHHEECCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCEEHH
YQRLGWDPVELVNEVQRITNAPERIAEGQGKGVAITGTAPGLWALLLALLPKCPICGATY
HHHHCCCHHHHHHHHHHHHCCHHHHHCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCHHH
LSSSGLLALPYLSGWQQSWPAILLLLIINLAAMAWFARSRKRWWALAWSVAGAVTLIGPG
HCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCH
LALGHAMAMVLGAAFTAVGSLLAAAAVVPGIRGGGRGPGIGSVRRPRRPAGRTVPLVRQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
ATGESPPPS
HCCCCCCCC
>Mature Secondary Structure 
ASGLLPWTQERFKAAVAEAAAQPDCSARTQALLVLMREEHPAYVQCSAAEVVRRRGWVL
CCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEECHHHHHHHCCCEE
VELGNAGLEPAAMPIVLEELETGHQPYLLAAAARALRQAEAPSPALAPILLRALEALARR
EEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
DDLVDLTVWGGTAASDAAGSALGEALATLRWLAPQAHGIRQGLRDLADGAAGPLAEDHRL
CCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHH
AVQAVLDDIAARDLPDSSDCCALPLSWRRFASGGDAAAPISTVCFEDQDGVSVSWDRLFL
HHHHHHHHHHHCCCCCCCCCEECCHHHHHHCCCCCCCCCHHHEEECCCCCCEEEECEEEC
GQPSVVAFFYTRCDNEQKCSLTVSQLAQVQRLLVSAGAQTSVRLAAITYDPDFDLPHRLR
CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCHHHHH
GYAESRSLVPGAHCRMLRTTQGRDALQDYFTLGVNFAGSVVNRHRIEVFVLDASGRIRAT
HHHHCCCCCCCHHHHHEECCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCEEHH
YQRLGWDPVELVNEVQRITNAPERIAEGQGKGVAITGTAPGLWALLLALLPKCPICGATY
HHHHCCCHHHHHHHHHHHHCCHHHHHCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCHHH
LSSSGLLALPYLSGWQQSWPAILLLLIINLAAMAWFARSRKRWWALAWSVAGAVTLIGPG
HCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCH
LALGHAMAMVLGAAFTAVGSLLAAAAVVPGIRGGGRGPGIGSVRRPRRPAGRTVPLVRQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
ATGESPPPS
HCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA