| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17546193
Identifier: 17546193
GI number: 17546193
Start: 1577836
End: 1578348
Strand: Direct
Name: 17546193
Synonym: RSc1474
Alternate gene names: NA
Gene position: 1577836-1578348 (Clockwise)
Preceding gene: 17546192
Following gene: 17546194
Centisome position: 42.46
GC content: 72.12
Gene sequence:
>513_bases GTGGACACGCATGACCTTGCCCCCCCACCGAACGCCTGCGCCGCCGATGGTGCGCAGCTCGCCGGTGGAAACCTCGACAC GCTGATGCAGCGTGCCCACGAACTGACCCACGCGGCCGCGCGTGCGCTGGGCCTGGATGAGCCGGCCGCCGCGCAGGCGG CGGACGACGGTGGCGTGGTGCTCAACGGCACGCTGGTCACCGTGACCCCGATGCCGCTGGAGGGATTGGCCGGCGAAGCG GGCGACGGTGCGCTGGTGGTGTCCGCTACGCTCGGCTGCCGTGTCGGCGCGCTGGATGCGCGGGCGCTGTGCGCCCTCTT CGCGCACGCGCCGGGCGTGCTGGCGGTCTACAACGCCGCCATCGGTTGCCAGCCCAACGGGGAACTGGTGCTGCACCGCA TGGTGCCGGTGCACGACGCCGTCGTCGACACGCTGGCGCAGGACCTGGTCGTCACGCAGCAGCTCGCCGTGCTGTTGGGC GATGCGGCAACGCAGGTGAGGACACCGCAATGA
Upstream 100 bases:
>100_bases GAAAGCGAGCAGTTCGCTCGCCGGTCTAGTGCTTCGCCTGCAAAGGCGAGGCCACGGGAGCGGCGCTCTATGGTTGACGT GAATAAACCAGGAGACGATT
Downstream 100 bases:
>100_bases AAATAGGTGGAACCCAATCCGGTCCGGTCGTTCCCAGCTCAGACTCCACGGTCGAGGGCAGTCCCGCGCCGCTCACGCAC GGTCCGACCTCGACCGCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MDTHDLAPPPNACAADGAQLAGGNLDTLMQRAHELTHAAARALGLDEPAAAQAADDGGVVLNGTLVTVTPMPLEGLAGEA GDGALVVSATLGCRVGALDARALCALFAHAPGVLAVYNAAIGCQPNGELVLHRMVPVHDAVVDTLAQDLVVTQQLAVLLG DAATQVRTPQ
Sequences:
>Translated_170_residues MDTHDLAPPPNACAADGAQLAGGNLDTLMQRAHELTHAAARALGLDEPAAAQAADDGGVVLNGTLVTVTPMPLEGLAGEA GDGALVVSATLGCRVGALDARALCALFAHAPGVLAVYNAAIGCQPNGELVLHRMVPVHDAVVDTLAQDLVVTQQLAVLLG DAATQVRTPQ >Mature_170_residues MDTHDLAPPPNACAADGAQLAGGNLDTLMQRAHELTHAAARALGLDEPAAAQAADDGGVVLNGTLVTVTPMPLEGLAGEA GDGALVVSATLGCRVGALDARALCALFAHAPGVLAVYNAAIGCQPNGELVLHRMVPVHDAVVDTLAQDLVVTQQLAVLLG DAATQVRTPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17062; Mature: 17062
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTHDLAPPPNACAADGAQLAGGNLDTLMQRAHELTHAAARALGLDEPAAAQAADDGGVV CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCEE LNGTLVTVTPMPLEGLAGEAGDGALVVSATLGCRVGALDARALCALFAHAPGVLAVYNAA EECEEEEECCCCCCCCCCCCCCCEEEEEEECCCEECCCHHHHHHHHHHCCCCCEEEHHHH IGCQPNGELVLHRMVPVHDAVVDTLAQDLVVTQQLAVLLGDAATQVRTPQ CCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCC >Mature Secondary Structure MDTHDLAPPPNACAADGAQLAGGNLDTLMQRAHELTHAAARALGLDEPAAAQAADDGGVV CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCEE LNGTLVTVTPMPLEGLAGEAGDGALVVSATLGCRVGALDARALCALFAHAPGVLAVYNAA EECEEEEECCCCCCCCCCCCCCCEEEEEEECCCEECCCHHHHHHHHHHCCCCCEEEHHHH IGCQPNGELVLHRMVPVHDAVVDTLAQDLVVTQQLAVLLGDAATQVRTPQ CCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA