Click here to switch to the map view.

The map label for this gene is 17546181

Identifier: 17546181

GI number: 17546181

Start: 1564590

End: 1565693

Strand: Reverse

Name: 17546181

Synonym: RSc1462

Alternate gene names: NA

Gene position: 1565693-1564590 (Counterclockwise)

Preceding gene: 17546182

Following gene: 17546180

Centisome position: 42.13

GC content: 67.93

Gene sequence:

>1104_bases
ATGAGTATTCTGGTCACCGGCGCGACCGGTTTTGTGGGCGGCGCCATTGCCGCCAATCTGGCGGAGAAGGGTTTGCTGGG
CGAGACCCGCTTCGCGGTGCGGGGGGAATCCACCGCTGAAGGCCTGGCGCGCCTGCGCGCCAACCTGGCACGCTTCGAGC
TGGGCGCGGCGGTCCTGGACGGGCTGTCCGAACGGCAGATCGTGCCGTTCGACCTGCGCGACGCCGCGGCCGCCGAGCTG
GGCGATCCGGAAATCCTCATCAACTGCGCCGCGCTGGCGACGTTCTCGAACCATCCCGCGCTGTGGGACACCAACGTCGG
CGGCGTGCTGGAGCTGGGCCGGCTGGCCAGCCGGGGCAAGCGGCTCAAGCGGTTCGTGCACATCGGCACGGCCATGTCAT
GCGGCCAGCTGGCCGACCGCCATGTGCGGGAAGCCTGGAACGTCCCGCCGCTGGAGCAGCATGCCGTGCCCTACACCTAT
TCCAAGGGGATGGCCGAGCTGAAGCTGCGCGAGGTATTTCCCGAGCTGCCGCTGGTGGTGGTGCGCCCGTCCATCGTGGT
CGGCCACAGCCGCCTGGGGTGCGCGCCGTCGGGCAGCATCTTCTGGATGCTGCGCATGGTGGCCATGCTGGAGACCTTCA
GCTGCCGCCTATCCGACCGCGTCGACATCCTGTCGGTGGACGATTGCGCCGAAGCCATCGTGCGCCTGGCGACCCGGCCC
GCGCTCGCGCACGACCTGTACCACATCAGCGCCGGCGATGCCCACTCGGAATGCATCGAGACGCTGTATCCGCGCTTCAA
GCGCTGCGCCAGCCCGGAAGAAGACGCGCAGGCGCTGGCCGGCTACGTGTACCAGCCCAAGATCGAAGAAAAGGCGCTGG
CCCGCAAGTTCCTGCGCACGACCGGCGACGGCAACGTGCGGCTGGTGGCGCGCGCCATCCATCTGTACGCCAAGTTCGCC
AGCATGAGCTACGTGTTCGACAACATGCGGCTGGTGGCGGAAACCGGCTTCCAGCCGCGCTCGCTGCTGAGCTACCTGGA
CCGCTGCCTGGACACCTCCGAGTCGGAGTCGATCACCCGGCAGATGCAGTGGGACTACAAATAG

Upstream 100 bases:

>100_bases
GCACCGCGCCTGCACTGCGAGCGCGAGCCATGGCGAGCAACGGGGAATCTGCGGGCGCGGGCAATCCGCTCCGCGACGCT
ACGAATTTCGAGTCTCAGGC

Downstream 100 bases:

>100_bases
GCCACCGGGCACCCGCTACCCGCACGGCCTGACGCGGCGCCGTGCTATAACCGTCGGCGCTTTCCCGAAGACCCCGCCTT
TCGTTACGAAGGAGCCCGCC

Product: signal peptide protein

Products: NA

Alternate protein names: Male Sterility Domain; Male Sterility Domain Protein; Hemolysin F; Male Sterility Domain-Containing Protein; NAD-Dependent Epimerase/Dehydratase Family Protein; Hemolysin HlyF; L-Aminoadipate-Semialdehyde Dehydrogenase Large Subunit

Number of amino acids: Translated: 367; Mature: 366

Protein sequence:

>367_residues
MSILVTGATGFVGGAIAANLAEKGLLGETRFAVRGESTAEGLARLRANLARFELGAAVLDGLSERQIVPFDLRDAAAAEL
GDPEILINCAALATFSNHPALWDTNVGGVLELGRLASRGKRLKRFVHIGTAMSCGQLADRHVREAWNVPPLEQHAVPYTY
SKGMAELKLREVFPELPLVVVRPSIVVGHSRLGCAPSGSIFWMLRMVAMLETFSCRLSDRVDILSVDDCAEAIVRLATRP
ALAHDLYHISAGDAHSECIETLYPRFKRCASPEEDAQALAGYVYQPKIEEKALARKFLRTTGDGNVRLVARAIHLYAKFA
SMSYVFDNMRLVAETGFQPRSLLSYLDRCLDTSESESITRQMQWDYK

Sequences:

>Translated_367_residues
MSILVTGATGFVGGAIAANLAEKGLLGETRFAVRGESTAEGLARLRANLARFELGAAVLDGLSERQIVPFDLRDAAAAEL
GDPEILINCAALATFSNHPALWDTNVGGVLELGRLASRGKRLKRFVHIGTAMSCGQLADRHVREAWNVPPLEQHAVPYTY
SKGMAELKLREVFPELPLVVVRPSIVVGHSRLGCAPSGSIFWMLRMVAMLETFSCRLSDRVDILSVDDCAEAIVRLATRP
ALAHDLYHISAGDAHSECIETLYPRFKRCASPEEDAQALAGYVYQPKIEEKALARKFLRTTGDGNVRLVARAIHLYAKFA
SMSYVFDNMRLVAETGFQPRSLLSYLDRCLDTSESESITRQMQWDYK
>Mature_366_residues
SILVTGATGFVGGAIAANLAEKGLLGETRFAVRGESTAEGLARLRANLARFELGAAVLDGLSERQIVPFDLRDAAAAELG
DPEILINCAALATFSNHPALWDTNVGGVLELGRLASRGKRLKRFVHIGTAMSCGQLADRHVREAWNVPPLEQHAVPYTYS
KGMAELKLREVFPELPLVVVRPSIVVGHSRLGCAPSGSIFWMLRMVAMLETFSCRLSDRVDILSVDDCAEAIVRLATRPA
LAHDLYHISAGDAHSECIETLYPRFKRCASPEEDAQALAGYVYQPKIEEKALARKFLRTTGDGNVRLVARAIHLYAKFAS
MSYVFDNMRLVAETGFQPRSLLSYLDRCLDTSESESITRQMQWDYK

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40356; Mature: 40225

Theoretical pI: Translated: 7.22; Mature: 7.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSILVTGATGFVGGAIAANLAEKGLLGETRFAVRGESTAEGLARLRANLARFELGAAVLD
CEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHC
GLSERQIVPFDLRDAAAAELGDPEILINCAALATFSNHPALWDTNVGGVLELGRLASRGK
CCCCCCCCCCCCCHHHHHHCCCCHHEEEHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHH
RLKRFVHIGTAMSCGQLADRHVREAWNVPPLEQHAVPYTYSKGMAELKLREVFPELPLVV
HHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCHHHCCHHHHHHHHHCCCCCEEE
VRPSIVVGHSRLGCAPSGSIFWMLRMVAMLETFSCRLSDRVDILSVDDCAEAIVRLATRP
ECCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCC
ALAHDLYHISAGDAHSECIETLYPRFKRCASPEEDAQALAGYVYQPKIEEKALARKFLRT
HHHHHHHEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHH
TGDGNVRLVARAIHLYAKFASMSYVFDNMRLVAETGFQPRSLLSYLDRCLDTSESESITR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHH
QMQWDYK
HHCCCCC
>Mature Secondary Structure 
SILVTGATGFVGGAIAANLAEKGLLGETRFAVRGESTAEGLARLRANLARFELGAAVLD
EEEEECCCCHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHC
GLSERQIVPFDLRDAAAAELGDPEILINCAALATFSNHPALWDTNVGGVLELGRLASRGK
CCCCCCCCCCCCCHHHHHHCCCCHHEEEHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHH
RLKRFVHIGTAMSCGQLADRHVREAWNVPPLEQHAVPYTYSKGMAELKLREVFPELPLVV
HHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCHHHCCHHHHHHHHHCCCCCEEE
VRPSIVVGHSRLGCAPSGSIFWMLRMVAMLETFSCRLSDRVDILSVDDCAEAIVRLATRP
ECCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCC
ALAHDLYHISAGDAHSECIETLYPRFKRCASPEEDAQALAGYVYQPKIEEKALARKFLRT
HHHHHHHEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHH
TGDGNVRLVARAIHLYAKFASMSYVFDNMRLVAETGFQPRSLLSYLDRCLDTSESESITR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHH
QMQWDYK
HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA