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The map label for this gene is yaeL [C]

Identifier: 17546130

GI number: 17546130

Start: 1510220

End: 1511608

Strand: Direct

Name: yaeL [C]

Synonym: RSc1411

Alternate gene names: 17546130

Gene position: 1510220-1511608 (Clockwise)

Preceding gene: 17546129

Following gene: 17546131

Centisome position: 40.64

GC content: 67.1

Gene sequence:

>1389_bases
TTGCTGACCGTTTTAGCGTTTGTTTTCGCGATCGCTGTTCTGATCGTCGTTCACGAACTGGGGCACTACAGCGTTGCACG
GTTGTGCGGCGTCAAGGTGCTGCGGTTCTCTGTCGGTTTCGGCAAGGTGCTGTTCCGCCGTGTCGGGCGTGGTCCGGATC
GCACCGAATGGACGCTCTGCGCCATTCCGCTCGGCGGCTACGTCAAGATGCTGGGCGAGAGCGCCCGCGACCCTGAGCGG
GATCCGCCAATTCCCCCCGAGGACCTGCCCCGTACCTTCGATCACCAGCCGGTCTACAAGCGTTTTGCCATTGTGGCGGC
CGGGCCGGTCTTCAATTTCCTGCTGGCGATCGCGCTGTATGCGCTGCTGGCCTGGGTGGGGGCGCAGGAGCCGCTGCCCA
TCCTCGGCGCACCGCCGCCCGGCAGCATCGCCGCGCAGGCTGATCTGCGCGCCAAGGATCGCGTGGTCGCGGTCGGCACT
GACGAGGAGGCGCCGACCCCGGTCCGGGCCTGGAGCGACGTGCGCATGCGCCTGTATGAAGCCGGCATCGGCGGGCGCGA
CGCCATCGTCCAGGTGCGCGGTGCCGACGGCGCGGAGCGGACCGTGCGCCTGCGGGAGCTGCCCAGCGCCGCCCGCTCGC
CCCAGGTCGACGTGATCGAGCAGGTCGGGCTGCGCCTGCTGGGCGGTCCGGTCACCATTGCCGAGGTTCTGCCCGGCAGC
GCCGGCGAGCGCGCCGGACTGCGTCGCGGCGACCAGATCGTCCGCTTCGCCGGCCAACCCGCCGACCAGGCTTCCGACCT
GATCCGCTGGATCCGCGCCATGCCCGAGCAGAACGCCTCGATCGACATCCTGCGCGATGGCCTGCCGATGACACTCCCGG
TGCGCCTGGGCGCCGACGCCGATTCCGCGAATCCGGGCGGGCCGAAGCTCGGCAAGCTCGGCGCGCAGCTCTCGCAGCAT
GTGGAAACCGAACTGATCCGCGACGAGCCGGTCCATGCACTGGGGCATGCGATGCGTGAGGTCTGGCGGACCTCGATGCT
GTCGCTGAAGGTGCTGGGCAAGATGATCGTGGGGCAGGCGTCGCTGCAGAACCTGAGCGGTCCGATCACCGTCGCCGACT
TCGCGGGCAAGGCCGCGAGCCTCGGCTGGCAGTCCTTCGTCGCCTTCCTGGCCTTGATCAGCGTGAGTCTCGGGGTGCTG
AACTTGTTGCCCGTTCCGGTATTGGATGGGGGGCATTTGCTGTATTATTGCGTGGAATTTTTGACAGGCAAGCCTGTGCC
GGAATCCTGGCAAGCGGTACTTCAAAAGATCGGCATCGCCTGCATCCTGCTTCTCACTTCGCTCGCCTTGTACAACGACT
TGAGCCGGCTGTTCCTGGCTCACGGCTAG

Upstream 100 bases:

>100_bases
CAGGCCCACGTGCAAGCGGCCTGTCAGCGCAAGCGGGTAACATAATGCGTTCGCGCGGGCGGTGTCCGCGCTGGCGTGTC
GACGCATCCGGAGAAGGTTC

Downstream 100 bases:

>100_bases
GCTGTCGCCGGGTTGAACCATCGTTGCCGCAGGCGTGCGGAAACCCAGGGTTTTGAAAAACACTCGGAAGTGGATCCCGG
CCGGATCCAATTTAGGGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 462; Mature: 462

Protein sequence:

>462_residues
MLTVLAFVFAIAVLIVVHELGHYSVARLCGVKVLRFSVGFGKVLFRRVGRGPDRTEWTLCAIPLGGYVKMLGESARDPER
DPPIPPEDLPRTFDHQPVYKRFAIVAAGPVFNFLLAIALYALLAWVGAQEPLPILGAPPPGSIAAQADLRAKDRVVAVGT
DEEAPTPVRAWSDVRMRLYEAGIGGRDAIVQVRGADGAERTVRLRELPSAARSPQVDVIEQVGLRLLGGPVTIAEVLPGS
AGERAGLRRGDQIVRFAGQPADQASDLIRWIRAMPEQNASIDILRDGLPMTLPVRLGADADSANPGGPKLGKLGAQLSQH
VETELIRDEPVHALGHAMREVWRTSMLSLKVLGKMIVGQASLQNLSGPITVADFAGKAASLGWQSFVAFLALISVSLGVL
NLLPVPVLDGGHLLYYCVEFLTGKPVPESWQAVLQKIGIACILLLTSLALYNDLSRLFLAHG

Sequences:

>Translated_462_residues
MLTVLAFVFAIAVLIVVHELGHYSVARLCGVKVLRFSVGFGKVLFRRVGRGPDRTEWTLCAIPLGGYVKMLGESARDPER
DPPIPPEDLPRTFDHQPVYKRFAIVAAGPVFNFLLAIALYALLAWVGAQEPLPILGAPPPGSIAAQADLRAKDRVVAVGT
DEEAPTPVRAWSDVRMRLYEAGIGGRDAIVQVRGADGAERTVRLRELPSAARSPQVDVIEQVGLRLLGGPVTIAEVLPGS
AGERAGLRRGDQIVRFAGQPADQASDLIRWIRAMPEQNASIDILRDGLPMTLPVRLGADADSANPGGPKLGKLGAQLSQH
VETELIRDEPVHALGHAMREVWRTSMLSLKVLGKMIVGQASLQNLSGPITVADFAGKAASLGWQSFVAFLALISVSLGVL
NLLPVPVLDGGHLLYYCVEFLTGKPVPESWQAVLQKIGIACILLLTSLALYNDLSRLFLAHG
>Mature_462_residues
MLTVLAFVFAIAVLIVVHELGHYSVARLCGVKVLRFSVGFGKVLFRRVGRGPDRTEWTLCAIPLGGYVKMLGESARDPER
DPPIPPEDLPRTFDHQPVYKRFAIVAAGPVFNFLLAIALYALLAWVGAQEPLPILGAPPPGSIAAQADLRAKDRVVAVGT
DEEAPTPVRAWSDVRMRLYEAGIGGRDAIVQVRGADGAERTVRLRELPSAARSPQVDVIEQVGLRLLGGPVTIAEVLPGS
AGERAGLRRGDQIVRFAGQPADQASDLIRWIRAMPEQNASIDILRDGLPMTLPVRLGADADSANPGGPKLGKLGAQLSQH
VETELIRDEPVHALGHAMREVWRTSMLSLKVLGKMIVGQASLQNLSGPITVADFAGKAASLGWQSFVAFLALISVSLGVL
NLLPVPVLDGGHLLYYCVEFLTGKPVPESWQAVLQKIGIACILLLTSLALYNDLSRLFLAHG

Specific function: Unknown

COG id: COG0750

COG function: function code M; Predicted membrane-associated Zn-dependent proteases 1

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain

Homologues:

Organism=Escherichia coli, GI1786373, Length=461, Percent_Identity=39.2624728850325, Blast_Score=261, Evalue=6e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1411_RALSO (Q8XZI4)

Other databases:

- EMBL:   AL646052
- RefSeq:   NP_519532.1
- ProteinModelPortal:   Q8XZI4
- SMR:   Q8XZI4
- MEROPS:   M50.004
- GeneID:   1220235
- GenomeReviews:   AL646052_GR
- KEGG:   rso:RSc1411
- NMPDR:   fig|267608.1.peg.1411
- HOGENOM:   HBG664087
- OMA:   HGTEFVV
- ProtClustDB:   CLSK896968
- BioCyc:   RSOL267608:RSC1411-MONOMER
- GO:   GO:0006508
- InterPro:   IPR001478
- InterPro:   IPR004387
- InterPro:   IPR008915
- SMART:   SM00228
- TIGRFAMs:   TIGR00054

Pfam domain/function: PF02163 Peptidase_M50; SSF50156 PDZ

EC number: NA

Molecular weight: Translated: 49615; Mature: 49615

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: PS50106 PDZ; PS00142 ZINC_PROTEASE

Important sites: ACT_SITE 19-19

Signals:

None

Transmembrane regions:

HASH(0xcff651c)-; HASH(0xcf13bfc)-; HASH(0xcf443ac)-; HASH(0xcde87e4)-;

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTVLAFVFAIAVLIVVHELGHYSVARLCGVKVLRFSVGFGKVLFRRVGRGPDRTEWTLC
CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEE
AIPLGGYVKMLGESARDPERDPPIPPEDLPRTFDHQPVYKRFAIVAAGPVFNFLLAIALY
EECCCHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHH
ALLAWVGAQEPLPILGAPPPGSIAAQADLRAKDRVVAVGTDEEAPTPVRAWSDVRMRLYE
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHH
AGIGGRDAIVQVRGADGAERTVRLRELPSAARSPQVDVIEQVGLRLLGGPVTIAEVLPGS
CCCCCCCEEEEEECCCCHHHHHHHHHCCHHHCCCCHHHHHHHCHHHHCCCCHHHHHCCCC
AGERAGLRRGDQIVRFAGQPADQASDLIRWIRAMPEQNASIDILRDGLPMTLPVRLGADA
CCCHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEEECCCC
DSANPGGPKLGKLGAQLSQHVETELIRDEPVHALGHAMREVWRTSMLSLKVLGKMIVGQA
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLQNLSGPITVADFAGKAASLGWQSFVAFLALISVSLGVLNLLPVPVLDGGHLLYYCVEF
HHHHCCCCEEEHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
LTGKPVPESWQAVLQKIGIACILLLTSLALYNDLSRLFLAHG
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure
MLTVLAFVFAIAVLIVVHELGHYSVARLCGVKVLRFSVGFGKVLFRRVGRGPDRTEWTLC
CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEE
AIPLGGYVKMLGESARDPERDPPIPPEDLPRTFDHQPVYKRFAIVAAGPVFNFLLAIALY
EECCCHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHH
ALLAWVGAQEPLPILGAPPPGSIAAQADLRAKDRVVAVGTDEEAPTPVRAWSDVRMRLYE
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHH
AGIGGRDAIVQVRGADGAERTVRLRELPSAARSPQVDVIEQVGLRLLGGPVTIAEVLPGS
CCCCCCCEEEEEECCCCHHHHHHHHHCCHHHCCCCHHHHHHHCHHHHCCCCHHHHHCCCC
AGERAGLRRGDQIVRFAGQPADQASDLIRWIRAMPEQNASIDILRDGLPMTLPVRLGADA
CCCHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEEECCCC
DSANPGGPKLGKLGAQLSQHVETELIRDEPVHALGHAMREVWRTSMLSLKVLGKMIVGQA
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLQNLSGPITVADFAGKAASLGWQSFVAFLALISVSLGVLNLLPVPVLDGGHLLYYCVEF
HHHHCCCCEEEHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
LTGKPVPESWQAVLQKIGIACILLLTSLALYNDLSRLFLAHG
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11823852