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The map label for this gene is 17546085

Identifier: 17546085

GI number: 17546085

Start: 1455880

End: 1456197

Strand: Reverse

Name: 17546085

Synonym: RSc1366

Alternate gene names: NA

Gene position: 1456197-1455880 (Counterclockwise)

Preceding gene: 17546089

Following gene: 17546080

Centisome position: 39.18

GC content: 63.21

Gene sequence:

>318_bases
GTGCGGGGCTATCATCGGCGCACCATCGTTTTCCAGCCGGGAACCATCATGAGCGACCTGCAAACCCGTTTCGACCAGGC
CCAAACCGACGTCAAGAGCCTGTCCGAGCGCCCCAGCAACATGACGCTGCTGCGCCTGTACGCCCTCTTCAAGCAAGGCA
GCGAAGGCGACGCCCACGGCGACAAGCCTGGCTTCACCGACATCGTCGGCCGCTACAAGTACGAAGCCTGGGCGGGCCTG
AAGGGCCTCTCGCAGGACGACGCCCGGCAGAAGTACATTGATCTCGTCGAAGAACTGAAGAGCGGCGCGACGACCTGA

Upstream 100 bases:

>100_bases
GCATTGTACCGGCTGGTGCCCCGCCTGGCCCCGCCGGCGGGCGACGACCGCGCGCGAAAACCGAGGGCATCCTCGAATTC
AAACGGCCCGGCCGGCGCGG

Downstream 100 bases:

>100_bases
TCGCCGACCGCCGCGCACATGGCACATGGCCGGGCCGAGCGCCCGGCTTTTTTATGGCCCCACGCCGGCCGACACCACGG
CGGCCGGCTCGCGCCGGCGC

Product: acyl-CoA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MRGYHRRTIVFQPGTIMSDLQTRFDQAQTDVKSLSERPSNMTLLRLYALFKQGSEGDAHGDKPGFTDIVGRYKYEAWAGL
KGLSQDDARQKYIDLVEELKSGATT

Sequences:

>Translated_105_residues
MRGYHRRTIVFQPGTIMSDLQTRFDQAQTDVKSLSERPSNMTLLRLYALFKQGSEGDAHGDKPGFTDIVGRYKYEAWAGL
KGLSQDDARQKYIDLVEELKSGATT
>Mature_105_residues
MRGYHRRTIVFQPGTIMSDLQTRFDQAQTDVKSLSERPSNMTLLRLYALFKQGSEGDAHGDKPGFTDIVGRYKYEAWAGL
KGLSQDDARQKYIDLVEELKSGATT

Specific function: Unknown

COG id: COG4281

COG function: function code I; Acyl-CoA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI120433590, Length=80, Percent_Identity=41.25, Blast_Score=74, Evalue=2e-14,
Organism=Homo sapiens, GI120433593, Length=79, Percent_Identity=40.5063291139241, Blast_Score=72, Evalue=9e-14,
Organism=Homo sapiens, GI260274832, Length=80, Percent_Identity=40, Blast_Score=70, Evalue=5e-13,
Organism=Homo sapiens, GI45643119, Length=80, Percent_Identity=40, Blast_Score=69, Evalue=6e-13,
Organism=Homo sapiens, GI260275230, Length=80, Percent_Identity=40, Blast_Score=69, Evalue=6e-13,
Organism=Homo sapiens, GI89886362, Length=80, Percent_Identity=45, Blast_Score=68, Evalue=1e-12,
Organism=Homo sapiens, GI295842534, Length=70, Percent_Identity=42.8571428571429, Blast_Score=67, Evalue=2e-12,
Organism=Homo sapiens, GI295842514, Length=70, Percent_Identity=42.8571428571429, Blast_Score=67, Evalue=4e-12,
Organism=Homo sapiens, GI295849279, Length=70, Percent_Identity=42.8571428571429, Blast_Score=67, Evalue=5e-12,
Organism=Homo sapiens, GI10140853, Length=70, Percent_Identity=42.8571428571429, Blast_Score=67, Evalue=5e-12,
Organism=Homo sapiens, GI295849266, Length=70, Percent_Identity=42.8571428571429, Blast_Score=66, Evalue=6e-12,
Organism=Homo sapiens, GI203098629, Length=84, Percent_Identity=38.0952380952381, Blast_Score=65, Evalue=1e-11,
Organism=Homo sapiens, GI109689720, Length=84, Percent_Identity=38.0952380952381, Blast_Score=65, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17535521, Length=97, Percent_Identity=44.3298969072165, Blast_Score=88, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI17506027, Length=76, Percent_Identity=55.2631578947368, Blast_Score=87, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI32566407, Length=84, Percent_Identity=38.0952380952381, Blast_Score=65, Evalue=7e-12,
Organism=Saccharomyces cerevisiae, GI6321474, Length=76, Percent_Identity=47.3684210526316, Blast_Score=76, Evalue=8e-16,
Organism=Drosophila melanogaster, GI24582714, Length=83, Percent_Identity=49.3975903614458, Blast_Score=83, Evalue=4e-17,
Organism=Drosophila melanogaster, GI24659809, Length=77, Percent_Identity=50.6493506493506, Blast_Score=77, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24659814, Length=77, Percent_Identity=50.6493506493506, Blast_Score=77, Evalue=2e-15,
Organism=Drosophila melanogaster, GI21357027, Length=77, Percent_Identity=38.961038961039, Blast_Score=68, Evalue=9e-13,
Organism=Drosophila melanogaster, GI19920606, Length=88, Percent_Identity=37.5, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11875; Mature: 11875

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGYHRRTIVFQPGTIMSDLQTRFDQAQTDVKSLSERPSNMTLLRLYALFKQGSEGDAHG
CCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCC
DKPGFTDIVGRYKYEAWAGLKGLSQDDARQKYIDLVEELKSGATT
CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRGYHRRTIVFQPGTIMSDLQTRFDQAQTDVKSLSERPSNMTLLRLYALFKQGSEGDAHG
CCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCC
DKPGFTDIVGRYKYEAWAGLKGLSQDDARQKYIDLVEELKSGATT
CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA