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The map label for this gene is priB [H]

Identifier: 17546027

GI number: 17546027

Start: 1394546

End: 1394872

Strand: Direct

Name: priB [H]

Synonym: RSc1308

Alternate gene names: 17546027

Gene position: 1394546-1394872 (Clockwise)

Preceding gene: 17546026

Following gene: 17546028

Centisome position: 37.52

GC content: 61.77

Gene sequence:

>327_bases
ATGGACGGAACTCCGGGGCACAACGCCATCAACCGACTGCAGCTCGTTGCCACGCTGGCCGAGCGTGAGGTGATGCGTTA
CACGCCGGCCGGCGTGCCCATCGTGAATTGCCTGCTGAGCTACAGCGGGCAGGCGATGGAAGCGCAGGCAGCGCGACAGG
TCGAGTTTTCGATCGAAGCGCTGGGCGCCGGCAAGATGGCCTCGGTTCTGGACCGCATCGCTCCTGGCACCGTCCTGGAG
TGCGTCGGATTCCTGGCTCGCAAGCATCGCAGCAGTAAGGCACTGGTCTTTCACATCTCCGGATGTAACGTATTCGTAAA
GGATTGA

Upstream 100 bases:

>100_bases
AGAAGGCTGCAGCGCAAAGCGAACAGGCCGCCTGATGTCGCGCGGTGCGGCGCGCAAGCCGGCCGGGCGGAGCCCAGCCG
CGTAATTGCGTACCGCAGCC

Downstream 100 bases:

>100_bases
ATCATGGCATTCATGAACAAGAAGCAGCGCGACGCAAAGAACAAGAAGCGCTTCCAGCAGCAAAACCCGTTGTTCAAGCG
CAAGAAGTTCTGCCGCTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MDGTPGHNAINRLQLVATLAEREVMRYTPAGVPIVNCLLSYSGQAMEAQAARQVEFSIEALGAGKMASVLDRIAPGTVLE
CVGFLARKHRSSKALVFHISGCNVFVKD

Sequences:

>Translated_108_residues
MDGTPGHNAINRLQLVATLAEREVMRYTPAGVPIVNCLLSYSGQAMEAQAARQVEFSIEALGAGKMASVLDRIAPGTVLE
CVGFLARKHRSSKALVFHISGCNVFVKD
>Mature_108_residues
MDGTPGHNAINRLQLVATLAEREVMRYTPAGVPIVNCLLSYSGQAMEAQAARQVEFSIEALGAGKMASVLDRIAPGTVLE
CVGFLARKHRSSKALVFHISGCNVFVKD

Specific function: Binds single-stranded DNA at the primosome assembly site (PAS) [H]

COG id: COG2965

COG function: function code L; Primosomal replication protein N

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11573; Mature: 11573

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGTPGHNAINRLQLVATLAEREVMRYTPAGVPIVNCLLSYSGQAMEAQAARQVEFSIEA
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHH
LGAGKMASVLDRIAPGTVLECVGFLARKHRSSKALVFHISGCNVFVKD
CCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEC
>Mature Secondary Structure
MDGTPGHNAINRLQLVATLAEREVMRYTPAGVPIVNCLLSYSGQAMEAQAARQVEFSIEA
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHH
LGAGKMASVLDRIAPGTVLECVGFLARKHRSSKALVFHISGCNVFVKD
CCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12700255 [H]