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The map label for this gene is 17546016

Identifier: 17546016

GI number: 17546016

Start: 1383423

End: 1383638

Strand: Reverse

Name: 17546016

Synonym: RSc1297

Alternate gene names: NA

Gene position: 1383638-1383423 (Counterclockwise)

Preceding gene: 17546020

Following gene: 17546014

Centisome position: 37.23

GC content: 65.28

Gene sequence:

>216_bases
TTGCGGTTTGCATCGCGCCGCCATCGCGTGCGCTGGATGTGGGCGTCGCACGTGACGCATCACGCTTCGGAAGGGATGCA
CTTCTCGACCGCGCTCCACCAGAGCCTGACCCACCCCATCTCGGGGATGTGGCTGTTCTGGCTTCCGCTGGCATGGATCG
GCTTCACACCGGACTGGGTGATTGCGGTGGCGCCCGGGTTCGAATCCCCACCCTGA

Upstream 100 bases:

>100_bases
ATCAAGACCGCGTATGCGTGGGTGTATGCGCACGGCCTGCGCCGATGCCCTAGACGGGGTGGTCGTTCGCCCTGCTCCTG
CTGCTGCAGGATGGTCTCTA

Downstream 100 bases:

>100_bases
GAGCAGGCAAAAAAAAACGCCCCGACGGATCGGGGCGTTTTTATCGGCAGATCGGCGCGCGATCAGACCGCTTCTTCACG
CGAGGCGCGCTTGCGCTCGT

Product: transmembrane protein

Products: NA

Alternate protein names: Fatty Acid Hydroxylase; Sterol Desaturase; Sterol Desaturase Protein; C-5 Sterol Desaturase; Transmembrane Protein; Sterol Desaturase-Like; Sur2-Type Hydroxylase/Desaturase Catalytic Region; Sterol Desaturase-Like Protein

Number of amino acids: Translated: 71; Mature: 71

Protein sequence:

>71_residues
MRFASRRHRVRWMWASHVTHHASEGMHFSTALHQSLTHPISGMWLFWLPLAWIGFTPDWVIAVAPGFESPP

Sequences:

>Translated_71_residues
MRFASRRHRVRWMWASHVTHHASEGMHFSTALHQSLTHPISGMWLFWLPLAWIGFTPDWVIAVAPGFESPP
>Mature_71_residues
MRFASRRHRVRWMWASHVTHHASEGMHFSTALHQSLTHPISGMWLFWLPLAWIGFTPDWVIAVAPGFESPP

Specific function: Unknown

COG id: COG3000

COG function: function code I; Sterol desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8263; Mature: 8263

Theoretical pI: Translated: 11.90; Mature: 11.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFASRRHRVRWMWASHVTHHASEGMHFSTALHQSLTHPISGMWLFWLPLAWIGFTPDWV
CCCCCCCCEEEEHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCE
IAVAPGFESPP
EEECCCCCCCC
>Mature Secondary Structure
MRFASRRHRVRWMWASHVTHHASEGMHFSTALHQSLTHPISGMWLFWLPLAWIGFTPDWV
CCCCCCCCEEEEHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCE
IAVAPGFESPP
EEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA