| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is fixG [H]
Identifier: 17545999
GI number: 17545999
Start: 1362765
End: 1364198
Strand: Direct
Name: fixG [H]
Synonym: RSc1280
Alternate gene names: 17545999
Gene position: 1362765-1364198 (Clockwise)
Preceding gene: 17545998
Following gene: 17546000
Centisome position: 36.67
GC content: 66.32
Gene sequence:
>1434_bases ATGTCGCCCGCCACCGCAGCGGCGGACGGCCAGGATGCGCCCACCGAACAAATGCTGTACGAGGTGCGGCGCAAGATTTA TCCGCGTGCCGTCACGGGGGCATTCGCGCGTTGGCGCGTCTGGCTGGTGCTGGCCACGCAGGCCGTGTTCTATGGGCTGC CGTGGTTGCAGTGGCATGGCCGGCAGGCTGTCCTGTTCGATCTCGGTGCGCGCAAGTTCTACCTGTTCGGCCTGGTGCTC TGGCCGCAGGACGTGATCTACCTGACGGTGCTGCTGGTGCTGTCGGCGTTGTCGCTGTTCCTGTTCACGGCGGTGGCGGG GCGCTTGTTCTGTGGCTACGCCTGTCCGCAAACGGTCTACACCGAAATCTTCATGTGGATCGAGCGGCATATCGAAGGCG ACCGCTTCGCCCGCATCCGCCTCGATGGCGAGCGCTGGAGCGTGCGCAAGCTGCGCCTGAAGACGGCCAAGCACAGCGCC TGGATCCTGATCGCGCTGTGGACCGGCTTCACCTTCGTCGGCTTCTTCACGCCGATCCGCGAGCTGGGCATGGAGGTCTG GACGTTGTCGCTCGGGCCGTGGCAGACCTTCTGGATGCTGTTCTATGCCTTTGCGACCTGGGGCAATGCGGGCTTCATGC GCGAGCAGGTCTGCCGCTACATGTGCCCGTATGCGCGTTTCCAGAGCGTGATGGTCGACCGCGATACTTATGTGGTCACC TACGATACGCAGCGCGGTGAGCCGCGCGGCAGCCGCTCGCGCAACGAGGATTTCGCGGCCAGGGGACTCGGGGCCTGCGT CGATTGCAGCATCTGCGTGCAGGTGTGCCCGACCGGCATCGATATCCGCCAGGGCCTGCAATACGAGTGCATTGGCTGCG GCGCCTGCATCGATGCCTGCGATCAGGTGATGGACAAGATGCGCTACCCGCGCGGCTTGATCCGCTACACCTCGGAGCGC GCCATGCGCGACCGGCTGCCCCCGGGCGAGGCGCGCCGGCATCTGCTGCGCCCGCGCGTGCTGATCTACAGTGGGGTCCT GCTGACCCTGGCGGCGGGCCTGATCGTGGCGCTGGCCTTGCGTGCACCGCTGAAGGTCGACGTGATCCGCGACCGCGGCG CGCTGGCGCGCGAAGTGGACGGCGACAAGATCGAGAACGTCTATCGGCTGCAACTGATGAATGCATCCGAGCAGCCCATG CGCGTGACCATCACTGCCGAAGGCCTGCCGCAGCTTGAAGTGCAGGGCGGACGAGGCGAGTCGACCACGCTCGAGCTGGC TCCGGCGGCCAACCGTCTCGTGCCGATCCGCGTACGCCGTCCCGCAGACGACGTGCAGCCCGGCTCGCACAAGATCCGCT TCGTGATCCAGGCAGACAAGGACGGCGGCAGTCTCGTGCTGCGCGAGCCGTCCAGCTTTATCGTGCCGCGCTAG
Upstream 100 bases:
>100_bases TCGCGGCCTACGTATGGGGTCTGTCCAACAGCGGTGCCGCGGGTCTTGACGCACAATCGGCCACACAGCAATGAGTGAAC ACGAGCCTGTCTGGCGCCCC
Downstream 100 bases:
>100_bases TGCGGCGTTTCGACCAGGAGGTTCCTGATGCAAGCAATCCAACCTTCCGCGGCGCAGGCGCGGCCCTGGTGGCGCGAGCC CTGGCCGTGGCTGCTGATGG
Product: iron-sulfur 4Fe-4S ferredoxin transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 477; Mature: 476
Protein sequence:
>477_residues MSPATAAADGQDAPTEQMLYEVRRKIYPRAVTGAFARWRVWLVLATQAVFYGLPWLQWHGRQAVLFDLGARKFYLFGLVL WPQDVIYLTVLLVLSALSLFLFTAVAGRLFCGYACPQTVYTEIFMWIERHIEGDRFARIRLDGERWSVRKLRLKTAKHSA WILIALWTGFTFVGFFTPIRELGMEVWTLSLGPWQTFWMLFYAFATWGNAGFMREQVCRYMCPYARFQSVMVDRDTYVVT YDTQRGEPRGSRSRNEDFAARGLGACVDCSICVQVCPTGIDIRQGLQYECIGCGACIDACDQVMDKMRYPRGLIRYTSER AMRDRLPPGEARRHLLRPRVLIYSGVLLTLAAGLIVALALRAPLKVDVIRDRGALAREVDGDKIENVYRLQLMNASEQPM RVTITAEGLPQLEVQGGRGESTTLELAPAANRLVPIRVRRPADDVQPGSHKIRFVIQADKDGGSLVLREPSSFIVPR
Sequences:
>Translated_477_residues MSPATAAADGQDAPTEQMLYEVRRKIYPRAVTGAFARWRVWLVLATQAVFYGLPWLQWHGRQAVLFDLGARKFYLFGLVL WPQDVIYLTVLLVLSALSLFLFTAVAGRLFCGYACPQTVYTEIFMWIERHIEGDRFARIRLDGERWSVRKLRLKTAKHSA WILIALWTGFTFVGFFTPIRELGMEVWTLSLGPWQTFWMLFYAFATWGNAGFMREQVCRYMCPYARFQSVMVDRDTYVVT YDTQRGEPRGSRSRNEDFAARGLGACVDCSICVQVCPTGIDIRQGLQYECIGCGACIDACDQVMDKMRYPRGLIRYTSER AMRDRLPPGEARRHLLRPRVLIYSGVLLTLAAGLIVALALRAPLKVDVIRDRGALAREVDGDKIENVYRLQLMNASEQPM RVTITAEGLPQLEVQGGRGESTTLELAPAANRLVPIRVRRPADDVQPGSHKIRFVIQADKDGGSLVLREPSSFIVPR >Mature_476_residues SPATAAADGQDAPTEQMLYEVRRKIYPRAVTGAFARWRVWLVLATQAVFYGLPWLQWHGRQAVLFDLGARKFYLFGLVLW PQDVIYLTVLLVLSALSLFLFTAVAGRLFCGYACPQTVYTEIFMWIERHIEGDRFARIRLDGERWSVRKLRLKTAKHSAW ILIALWTGFTFVGFFTPIRELGMEVWTLSLGPWQTFWMLFYAFATWGNAGFMREQVCRYMCPYARFQSVMVDRDTYVVTY DTQRGEPRGSRSRNEDFAARGLGACVDCSICVQVCPTGIDIRQGLQYECIGCGACIDACDQVMDKMRYPRGLIRYTSERA MRDRLPPGEARRHLLRPRVLIYSGVLLTLAAGLIVALALRAPLKVDVIRDRGALAREVDGDKIENVYRLQLMNASEQPMR VTITAEGLPQLEVQGGRGESTTLELAPAANRLVPIRVRRPADDVQPGSHKIRFVIQADKDGGSLVLREPSSFIVPR
Specific function: FixG is predicted to be involved in a redox process. The four proteins fixG, fixH, fixI, and fixS may participate in a membrane-bound complex coupling the fixI cation pump with a redox process catalyzed by fixG [H]
COG id: COG0348
COG function: function code C; Polyferredoxin
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR014116 - InterPro: IPR012285 - InterPro: IPR013783 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54124; Mature: 53993
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPATAAADGQDAPTEQMLYEVRRKIYPRAVTGAFARWRVWLVLATQAVFYGLPWLQWHG CCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECC RQAVLFDLGARKFYLFGLVLWPQDVIYLTVLLVLSALSLFLFTAVAGRLFCGYACPQTVY CEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH TEIFMWIERHIEGDRFARIRLDGERWSVRKLRLKTAKHSAWILIALWTGFTFVGFFTPIR HHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHH ELGMEVWTLSLGPWQTFWMLFYAFATWGNAGFMREQVCRYMCPYARFQSVMVDRDTYVVT HCCCEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHEEECCEEEEE YDTQRGEPRGSRSRNEDFAARGLGACVDCSICVQVCPTGIDIRQGLQYECIGCGACIDAC EECCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCCCCCHHCCCCEEEEECHHHHHHH DQVMDKMRYPRGLIRYTSERAMRDRLPPGEARRHLLRPRVLIYSGVLLTLAAGLIVALAL HHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH RAPLKVDVIRDRGALAREVDGDKIENVYRLQLMNASEQPMRVTITAEGLPQLEVQGGRGE CCCCEEEEEECCCCHHHCCCCHHHCCEEEEEEECCCCCCEEEEEEECCCCCEEEECCCCC STTLELAPAANRLVPIRVRRPADDVQPGSHKIRFVIQADKDGGSLVLREPSSFIVPR CCEEEECCCCCCEEEEEEECCCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCC >Mature Secondary Structure SPATAAADGQDAPTEQMLYEVRRKIYPRAVTGAFARWRVWLVLATQAVFYGLPWLQWHG CCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECC RQAVLFDLGARKFYLFGLVLWPQDVIYLTVLLVLSALSLFLFTAVAGRLFCGYACPQTVY CEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH TEIFMWIERHIEGDRFARIRLDGERWSVRKLRLKTAKHSAWILIALWTGFTFVGFFTPIR HHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHH ELGMEVWTLSLGPWQTFWMLFYAFATWGNAGFMREQVCRYMCPYARFQSVMVDRDTYVVT HCCCEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHEEECCEEEEE YDTQRGEPRGSRSRNEDFAARGLGACVDCSICVQVCPTGIDIRQGLQYECIGCGACIDAC EECCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCCCCCHHCCCCEEEEECHHHHHHH DQVMDKMRYPRGLIRYTSERAMRDRLPPGEARRHLLRPRVLIYSGVLLTLAAGLIVALAL HHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH RAPLKVDVIRDRGALAREVDGDKIENVYRLQLMNASEQPMRVTITAEGLPQLEVQGGRGE CCCCEEEEEECCCCHHHCCCCHHHCCEEEEEEECCCCCCEEEEEEECCCCCEEEECCCCC STTLELAPAANRLVPIRVRRPADDVQPGSHKIRFVIQADKDGGSLVLREPSSFIVPR CCEEEECCCCCCEEEEEEECCCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2536685; 11481432 [H]