Click here to switch to the map view.

The map label for this gene is comB [H]

Identifier: 17545992

GI number: 17545992

Start: 1355581

End: 1356429

Strand: Reverse

Name: comB [H]

Synonym: RSc1273

Alternate gene names: 17545992

Gene position: 1356429-1355581 (Counterclockwise)

Preceding gene: 17546002

Following gene: 17545982

Centisome position: 36.5

GC content: 71.38

Gene sequence:

>849_bases
GTGGCAACCGAATTCAGCCTGTACAACGTCCATTGCGAATGGGGCGAGCACGGTGCATCCGCGCTGGCACCGCATTGCGA
CGTGGTGATCGTGGTGGACGTGCTGTCCTTCTGCACGTGCGTGGACATTGCGGTGGGGCGCGGCGCGCGCATCTACCCCT
ATCCGTGGCGCGACGGCAGCGCCGAGACCTTCGCCCGCCGCGCGGGCGCCATGCTGGCCGGCACCAACCGCAGCCAGCCG
GGCTATACGCTGTCGCCGGCCTCGCTGCGCGGCCTGCCGATGGGCAGCAGCCTGGTGCTGCCCTCGCCCAACGGCGCGAC
GCTGGCCCTGGCGACCGGCTCGACGCCCACCTTCGCGGGGTGCCTACGCAACGCGCGCGCCGTGGCGGAAGCCGCCTCGC
GGCACGGGCGGCGCATCGCCGTGGTGGCTTCGGGTGAGCGCTGGGCCGACGGCAACCTGCGGCCGGCGCTGGAAGACTGG
CTGGCGGCCGGTGCGATCGTGCATCACCTGTCGGAAACCATCGCGGGTTTCCTGCCGCATGCGCTGTCGCCGGAAGCACT
GGCTGCCCGCGCGGTCTATCGCGAGGCGTCCCAGACCGGCATGATGAAGGCTTGGCTGCTCGATTCCGTGTCGGGCCGCG
AACTGTGCGAACGCGGCTTCGCGGAAGACGTGACGATTGCCGCGCAGACCGACGTCAGCACGGTGGCGCCGATGCTGGTG
GAAGGCGCGTTCCGCAACGCCACGCCCAAGTCCGAAAGCATGCTGTCACCGGACCTGCTCGGTGCCGCCGGCCTGCGCGC
CTTGCGCCCGACGCCGGCCTCGCATCGCAACCCGATGCCGCCGCGCTGA

Upstream 100 bases:

>100_bases
ATGCGGCGCCCGCGGCACGCCATCCCGCCGGCCGGCCTGTCGCAAAATCTTTGGCGTCCTATAGTGATAGTTCGACTGGG
CAACCAGGAGGACCGTATCC

Downstream 100 bases:

>100_bases
GGCGGCATCAGGTCAGTGTCGTATCGACCGCGCGGCGCGGTGCCTCGAGGTATTCGCGCGACTGCATCTCGATGATGCGC
GACACCGTGCGGTGGAATTC

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MATEFSLYNVHCEWGEHGASALAPHCDVVIVVDVLSFCTCVDIAVGRGARIYPYPWRDGSAETFARRAGAMLAGTNRSQP
GYTLSPASLRGLPMGSSLVLPSPNGATLALATGSTPTFAGCLRNARAVAEAASRHGRRIAVVASGERWADGNLRPALEDW
LAAGAIVHHLSETIAGFLPHALSPEALAARAVYREASQTGMMKAWLLDSVSGRELCERGFAEDVTIAAQTDVSTVAPMLV
EGAFRNATPKSESMLSPDLLGAAGLRALRPTPASHRNPMPPR

Sequences:

>Translated_282_residues
MATEFSLYNVHCEWGEHGASALAPHCDVVIVVDVLSFCTCVDIAVGRGARIYPYPWRDGSAETFARRAGAMLAGTNRSQP
GYTLSPASLRGLPMGSSLVLPSPNGATLALATGSTPTFAGCLRNARAVAEAASRHGRRIAVVASGERWADGNLRPALEDW
LAAGAIVHHLSETIAGFLPHALSPEALAARAVYREASQTGMMKAWLLDSVSGRELCERGFAEDVTIAAQTDVSTVAPMLV
EGAFRNATPKSESMLSPDLLGAAGLRALRPTPASHRNPMPPR
>Mature_281_residues
ATEFSLYNVHCEWGEHGASALAPHCDVVIVVDVLSFCTCVDIAVGRGARIYPYPWRDGSAETFARRAGAMLAGTNRSQPG
YTLSPASLRGLPMGSSLVLPSPNGATLALATGSTPTFAGCLRNARAVAEAASRHGRRIAVVASGERWADGNLRPALEDWL
AAGAIVHHLSETIAGFLPHALSPEALAARAVYREASQTGMMKAWLLDSVSGRELCERGFAEDVTIAAQTDVSTVAPMLVE
GAFRNATPKSESMLSPDLLGAAGLRALRPTPASHRNPMPPR

Specific function: Unknown

COG id: COG2045

COG function: function code HR; Phosphosulfolactate phosphohydrolase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ComB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005238
- InterPro:   IPR022995 [H]

Pfam domain/function: PF04029 2-ph_phosp [H]

EC number: =3.1.3.71 [H]

Molecular weight: Translated: 29726; Mature: 29595

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATEFSLYNVHCEWGEHGASALAPHCDVVIVVDVLSFCTCVDIAVGRGARIYPYPWRDGS
CCCCEEEEEEEECCCCCCCHHCCCCCCEEHHHHHHHHHHHHHHHHCCCCEECCCCCCCCC
AETFARRAGAMLAGTNRSQPGYTLSPASLRGLPMGSSLVLPSPNGATLALATGSTPTFAG
HHHHHHHHCCEEECCCCCCCCEEECCHHCCCCCCCCEEEEECCCCCEEEEECCCCCHHHH
CLRNARAVAEAASRHGRRIAVVASGERWADGNLRPALEDWLAAGAIVHHLSETIAGFLPH
HHHHHHHHHHHHHHCCCEEEEEECCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
ALSPEALAARAVYREASQTGMMKAWLLDSVSGRELCERGFAEDVTIAAQTDVSTVAPMLV
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEEECCCHHHHHHHHH
EGAFRNATPKSESMLSPDLLGAAGLRALRPTPASHRNPMPPR
HHHHCCCCCCCHHCCCCHHHHHHCHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ATEFSLYNVHCEWGEHGASALAPHCDVVIVVDVLSFCTCVDIAVGRGARIYPYPWRDGS
CCCEEEEEEEECCCCCCCHHCCCCCCEEHHHHHHHHHHHHHHHHCCCCEECCCCCCCCC
AETFARRAGAMLAGTNRSQPGYTLSPASLRGLPMGSSLVLPSPNGATLALATGSTPTFAG
HHHHHHHHCCEEECCCCCCCCEEECCHHCCCCCCCCEEEEECCCCCEEEEECCCCCHHHH
CLRNARAVAEAASRHGRRIAVVASGERWADGNLRPALEDWLAAGAIVHHLSETIAGFLPH
HHHHHHHHHHHHHHCCCEEEEEECCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
ALSPEALAARAVYREASQTGMMKAWLLDSVSGRELCERGFAEDVTIAAQTDVSTVAPMLV
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEEECCCHHHHHHHHH
EGAFRNATPKSESMLSPDLLGAAGLRALRPTPASHRNPMPPR
HHHHCCCCCCCHHCCCCHHHHHHCHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA