| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is suhB [H]
Identifier: 17545879
GI number: 17545879
Start: 1219045
End: 1219857
Strand: Reverse
Name: suhB [H]
Synonym: RSc1160
Alternate gene names: 17545879
Gene position: 1219857-1219045 (Counterclockwise)
Preceding gene: 17545882
Following gene: 17545877
Centisome position: 32.82
GC content: 66.3
Gene sequence:
>813_bases ATGCATCCGATGCTCAATATCGCCGTCAAGGCTGCCCGCAAAGCCGGGACCGTCATCAATCGCGCCACGCTCCAGGGCGA TTCCCGGCAGATCGAGCGCAAACAACACAACGATTTCGTCACCGACGTCGATCGCGCGGCCGAAGCCACGATCATCGAGA TCATCAAGACAGCGTATCCGGATCACGCGATTCTAGCGGAAGAGTCCGGTCGCTCCTGGGCCGACGGCGAAACCGCCAGC GAAAACGTCTGGGTGATCGACCCGCTGGACGGCACCACCAACTTCATCCACGGCTTCCCGCAATTCGCGGTGTCGATCGC GCTGATGCAGCGCAACGTCGTCACCCAGGCCGTGGTCTACGACCCGACCCGCGACGAACTGTTCACCGCCTCCAAGGGCG CGGGCGCCTTCCTCAACAACCGCCGCATCCGCGTCACGCGCCGCGACAAGCTGGCCGACTGCCTGATCGGCACCGGCTTC CCCTACCGCGACATGGAAGGCCTGGACGACTACGTCAAGCTGTTCGCCACCATGACCGAGAACTGCGCCGGCCTGCGCCG CCCGGGCGCCGCCGCGCTGGACCTGGCCTATGTGGCCAGCGGCCGCCTCGACGGCTTCTTCGAGCAGGGCCTCAACGCGT GGGACATGGCTGCGGGCTCGCTGCTGATCACCGAGGCCGGCGGCCTGGTGGGCAACTACTGCGGCGAGGCCGGCTACCTG GACCAGGGCGAGATCCTGGCCGGCAACCCGAAGGCCTTCGTGCAGATGATCAAGCTGACCACGCCGTTCTCGCGCTCGCA GGCCGTGGTCTGA
Upstream 100 bases:
>100_bases ACTCTTTTTGGCGGCGGGATCGTGCCCGCCGTTCGTTCTTCCACAATTCGCTGTGTTGTTTCGCCTGACGCGCGATCCGC GCCAGGCGCGGAGATCCGTC
Downstream 100 bases:
>100_bases TCACGCCACGCCCGATCGACGAAGCCCGCCGGAACGCGGGCTTTTTTATTGCGCGCCGGCCGGCGCGGCGCTCACCACCA CCAGCGCCTGCGCCGGCTCC
Product: inositol monophosphatase
Products: NA
Alternate protein names: I-1-Pase; IMPase; Inositol-1-phosphatase [H]
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MHPMLNIAVKAARKAGTVINRATLQGDSRQIERKQHNDFVTDVDRAAEATIIEIIKTAYPDHAILAEESGRSWADGETAS ENVWVIDPLDGTTNFIHGFPQFAVSIALMQRNVVTQAVVYDPTRDELFTASKGAGAFLNNRRIRVTRRDKLADCLIGTGF PYRDMEGLDDYVKLFATMTENCAGLRRPGAAALDLAYVASGRLDGFFEQGLNAWDMAAGSLLITEAGGLVGNYCGEAGYL DQGEILAGNPKAFVQMIKLTTPFSRSQAVV
Sequences:
>Translated_270_residues MHPMLNIAVKAARKAGTVINRATLQGDSRQIERKQHNDFVTDVDRAAEATIIEIIKTAYPDHAILAEESGRSWADGETAS ENVWVIDPLDGTTNFIHGFPQFAVSIALMQRNVVTQAVVYDPTRDELFTASKGAGAFLNNRRIRVTRRDKLADCLIGTGF PYRDMEGLDDYVKLFATMTENCAGLRRPGAAALDLAYVASGRLDGFFEQGLNAWDMAAGSLLITEAGGLVGNYCGEAGYL DQGEILAGNPKAFVQMIKLTTPFSRSQAVV >Mature_270_residues MHPMLNIAVKAARKAGTVINRATLQGDSRQIERKQHNDFVTDVDRAAEATIIEIIKTAYPDHAILAEESGRSWADGETAS ENVWVIDPLDGTTNFIHGFPQFAVSIALMQRNVVTQAVVYDPTRDELFTASKGAGAFLNNRRIRVTRRDKLADCLIGTGF PYRDMEGLDDYVKLFATMTENCAGLRRPGAAALDLAYVASGRLDGFFEQGLNAWDMAAGSLLITEAGGLVGNYCGEAGYL DQGEILAGNPKAFVQMIKLTTPFSRSQAVV
Specific function: Unknown
COG id: COG0483
COG function: function code G; Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI7657236, Length=256, Percent_Identity=34.765625, Blast_Score=148, Evalue=6e-36, Organism=Homo sapiens, GI5031789, Length=258, Percent_Identity=31.7829457364341, Blast_Score=145, Evalue=5e-35, Organism=Homo sapiens, GI221625487, Length=258, Percent_Identity=31.7829457364341, Blast_Score=144, Evalue=7e-35, Organism=Homo sapiens, GI221625507, Length=145, Percent_Identity=35.1724137931034, Blast_Score=101, Evalue=6e-22, Organism=Escherichia coli, GI1788882, Length=258, Percent_Identity=50.7751937984496, Blast_Score=257, Evalue=6e-70, Organism=Escherichia coli, GI1790659, Length=130, Percent_Identity=32.3076923076923, Blast_Score=69, Evalue=4e-13, Organism=Caenorhabditis elegans, GI193202572, Length=237, Percent_Identity=32.4894514767932, Blast_Score=145, Evalue=2e-35, Organism=Caenorhabditis elegans, GI193202570, Length=239, Percent_Identity=32.6359832635983, Blast_Score=137, Evalue=5e-33, Organism=Saccharomyces cerevisiae, GI6320493, Length=211, Percent_Identity=37.914691943128, Blast_Score=136, Evalue=3e-33, Organism=Saccharomyces cerevisiae, GI6321836, Length=234, Percent_Identity=31.1965811965812, Blast_Score=111, Evalue=9e-26, Organism=Drosophila melanogaster, GI21357329, Length=266, Percent_Identity=34.2105263157895, Blast_Score=149, Evalue=2e-36, Organism=Drosophila melanogaster, GI24664922, Length=232, Percent_Identity=33.6206896551724, Blast_Score=142, Evalue=2e-34, Organism=Drosophila melanogaster, GI21357303, Length=237, Percent_Identity=33.3333333333333, Blast_Score=139, Evalue=3e-33, Organism=Drosophila melanogaster, GI24664926, Length=230, Percent_Identity=30, Blast_Score=125, Evalue=3e-29, Organism=Drosophila melanogaster, GI21357957, Length=233, Percent_Identity=31.3304721030043, Blast_Score=121, Evalue=5e-28, Organism=Drosophila melanogaster, GI24664918, Length=196, Percent_Identity=34.1836734693878, Blast_Score=112, Evalue=2e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 - InterPro: IPR022337 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.25 [H]
Molecular weight: Translated: 29378; Mature: 29378
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: PS00629 IMP_1 ; PS00630 IMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPMLNIAVKAARKAGTVINRATLQGDSRQIERKQHNDFVTDVDRAAEATIIEIIKTAYP CCCHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC DHAILAEESGRSWADGETASENVWVIDPLDGTTNFIHGFPQFAVSIALMQRNVVTQAVVY CCEEEECCCCCCCCCCCCCCCCEEEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHEEEE DPTRDELFTASKGAGAFLNNRRIRVTRRDKLADCLIGTGFPYRDMEGLDDYVKLFATMTE CCCHHHHEECCCCCCCEECCCEEEEEEHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH NCAGLRRPGAAALDLAYVASGRLDGFFEQGLNAWDMAAGSLLITEAGGLVGNYCGEAGYL HHHCCCCCCCHHHHHHHHHCCCCCHHHHHCCCHHHHCCCCEEEEECCCHHHHHCCCCCCC DQGEILAGNPKAFVQMIKLTTPFSRSQAVV CCCCEEECCHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MHPMLNIAVKAARKAGTVINRATLQGDSRQIERKQHNDFVTDVDRAAEATIIEIIKTAYP CCCHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC DHAILAEESGRSWADGETASENVWVIDPLDGTTNFIHGFPQFAVSIALMQRNVVTQAVVY CCEEEECCCCCCCCCCCCCCCCEEEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHEEEE DPTRDELFTASKGAGAFLNNRRIRVTRRDKLADCLIGTGFPYRDMEGLDDYVKLFATMTE CCCHHHHEECCCCCCCEECCCEEEEEEHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH NCAGLRRPGAAALDLAYVASGRLDGFFEQGLNAWDMAAGSLLITEAGGLVGNYCGEAGYL HHHCCCCCCCHHHHHHHHHCCCCCHHHHHCCCHHHHCCCCEEEEECCCHHHHHCCCCCCC DQGEILAGNPKAFVQMIKLTTPFSRSQAVV CCCCEEECCHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]