| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
Click here to switch to the map view.
The map label for this gene is yuxK [H]
Identifier: 17545855
GI number: 17545855
Start: 1193297
End: 1193686
Strand: Reverse
Name: yuxK [H]
Synonym: RSc1136
Alternate gene names: 17545855
Gene position: 1193686-1193297 (Counterclockwise)
Preceding gene: 17545856
Following gene: 17545852
Centisome position: 32.12
GC content: 69.49
Gene sequence:
>390_bases ATGATCGTTGTCTTCGATGCGCAGTGCCTGCTCTGCAGCGGCTTCGCGCGGTTCCTGCTGAAGCACGACCGGCGCGGCGT GCTGCGCTTCGCATCGATGCAGGGCGAGACCGGCCGCGCCCTGCTGCGTGCGGCGGACGTGGACCCGGAAGATGTCGACA CCGTGCTGTTCGTGCGTGACGGCCGCGCATGGCGCGAAAGCGCCGCCGCGCTGCGCATCCTGCATGCGCTGGGCTGGCCG TGGCGGCTTGCGTGGCTCGGTTGGGCTGTGCCCTTGCCGATACGCGATGCGCTCTACCGTTGCGTGGCGCGCAACCGCTA TCGCTGGTTCGGCTGCTCGGACACCTGCATCCTGCCGCCGCCCGGTGCGGCACAGCGGTTTCTCGACTGA
Upstream 100 bases:
>100_bases ACGGCGACCGGCTGCACTTCAACGTGCGCGCCAGCGTGCCGCTGCTCGGTGTCGTGGCCGCGTATCGGGGGCATCTCGAC CTGGCCACGACGGCATCCGC
Downstream 100 bases:
>100_bases ACGGCCACGCTCACGCCGCCTTGCAGAAGGCCTCCACCAGTGCCGCCACCTGCTCCGGCTGGTCATGATGCAGCATGTGG CCCGCATCGGTGATCCTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: ORF2 [H]
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MIVVFDAQCLLCSGFARFLLKHDRRGVLRFASMQGETGRALLRAADVDPEDVDTVLFVRDGRAWRESAAALRILHALGWP WRLAWLGWAVPLPIRDALYRCVARNRYRWFGCSDTCILPPPGAAQRFLD
Sequences:
>Translated_129_residues MIVVFDAQCLLCSGFARFLLKHDRRGVLRFASMQGETGRALLRAADVDPEDVDTVLFVRDGRAWRESAAALRILHALGWP WRLAWLGWAVPLPIRDALYRCVARNRYRWFGCSDTCILPPPGAAQRFLD >Mature_129_residues MIVVFDAQCLLCSGFARFLLKHDRRGVLRFASMQGETGRALLRAADVDPEDVDTVLFVRDGRAWRESAAALRILHALGWP WRLAWLGWAVPLPIRDALYRCVARNRYRWFGCSDTCILPPPGAAQRFLD
Specific function: Unknown
COG id: COG3011
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DCC thiol-disulfide oxidoreductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007263 [H]
Pfam domain/function: PF04134 DUF393 [H]
EC number: NA
Molecular weight: Translated: 14686; Mature: 14686
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVVFDAQCLLCSGFARFLLKHDRRGVLRFASMQGETGRALLRAADVDPEDVDTVLFVRD CEEEECCHHHHHHHHHHHHHHHCCCCCEEHHCCCCCCCHHHHHCCCCCCCCCCEEEEEEC GRAWRESAAALRILHALGWPWRLAWLGWAVPLPIRDALYRCVARNRYRWFGCSDTCILPP CCHHHHHHHHHHHHHHCCCCCEEHHHHCCCCCCHHHHHHHHHHCCCEEEECCCCCEEECC PGAAQRFLD CCCHHCCCC >Mature Secondary Structure MIVVFDAQCLLCSGFARFLLKHDRRGVLRFASMQGETGRALLRAADVDPEDVDTVLFVRD CEEEECCHHHHHHHHHHHHHHHCCCCCEEHHCCCCCCCHHHHHCCCCCCCCCCEEEEEEC GRAWRESAAALRILHALGWPWRLAWLGWAVPLPIRDALYRCVARNRYRWFGCSDTCILPP CCHHHHHHHHHHHHHHCCCCCEEHHHHCCCCCCHHHHHHHHHHCCCEEEECCCCCEEECC PGAAQRFLD CCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7961491; 9274030; 9384377 [H]