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The map label for this gene is rsmI [H]

Identifier: 17545764

GI number: 17545764

Start: 1100058

End: 1100789

Strand: Reverse

Name: rsmI [H]

Synonym: RSc1045

Alternate gene names: 17545764

Gene position: 1100789-1100058 (Counterclockwise)

Preceding gene: 17545765

Following gene: 17545759

Centisome position: 29.62

GC content: 69.81

Gene sequence:

>732_bases
ATGGCCGGCACGCTCTACCTGATCCCCAACACGCTCGGCCTGCGCGACGCCGACGATCCGCTGCCGGAGGTGATTCCCGC
CGGCGTCCAACAGATCACCGCGCGGCTCGACTACTTTGTCGCCGAGCACGCCAAGACGGCGCGCGCCCTGCTGAAGAAGC
TGGCCGAAACCGCGCCGCTGACGCACGCACTGCAGGACATCACGATCCGTGAGCTCAACGTCAAGACGCCGGAATCGGAG
CTGGAAGCCCTGTTGGCACCAGTGGTCGGCGGGCGCGATGGCGGACTGATGTCGGAGGCCGGCGTGCCCGCGGTGGCCGA
CCCCGGGGCGAACCTGGTGCGGCTGGCGCATCGGCACGGCGTGCGCGTGAAACCGCTGGTGGGACCGAGCTCGATCCTGC
TGGCAGTGATGGCTTCCGGCCTGAACGGCCAGAGCTTCGCGTTCAACGGCTATCTGCCCGTCGATGCAGGCGAACGTGTA
CGCAAGCTGCGCGCGCTGGAGCAGGCGTCGCGCGCGGCGGGGCAGACCCAGGTGTTCATCGAGACGCCCTACCGCAACGG
CGCACTGCTGGAGGCGATCCAGGCAGCCTGCTCGCCGGGCACGCTGCTTTCGGTGGCGGTGGACCTGACGCTGCCCAGCG
AGCAGGTGGTGACCCTGCCGGTGGGCGATTGGCGCCCGGATCGGCTGGCCCTGCACAAGCGGCCGGCCATCTTCTCGCTG
CTGGCGCGCTGA

Upstream 100 bases:

>100_bases
ACGCGTGGAATCGCCAGATCCGACCGCGCTGGTCGGGTTGCCGCTGATCGCGCTGACCACCATGCTGCGCAACGTGCACT
ACCCCCTGTTCGCGTAAGCC

Downstream 100 bases:

>100_bases
GGCGCCGCGCCTACTGCCTCATCAGGAGCTTGAGCTGGCCGGTCGCGGCCAGCGCCTTGATGGCCCCTGCGCCCATGGCC
GTGCCGAACTTGCGTGCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MAGTLYLIPNTLGLRDADDPLPEVIPAGVQQITARLDYFVAEHAKTARALLKKLAETAPLTHALQDITIRELNVKTPESE
LEALLAPVVGGRDGGLMSEAGVPAVADPGANLVRLAHRHGVRVKPLVGPSSILLAVMASGLNGQSFAFNGYLPVDAGERV
RKLRALEQASRAAGQTQVFIETPYRNGALLEAIQAACSPGTLLSVAVDLTLPSEQVVTLPVGDWRPDRLALHKRPAIFSL
LAR

Sequences:

>Translated_243_residues
MAGTLYLIPNTLGLRDADDPLPEVIPAGVQQITARLDYFVAEHAKTARALLKKLAETAPLTHALQDITIRELNVKTPESE
LEALLAPVVGGRDGGLMSEAGVPAVADPGANLVRLAHRHGVRVKPLVGPSSILLAVMASGLNGQSFAFNGYLPVDAGERV
RKLRALEQASRAAGQTQVFIETPYRNGALLEAIQAACSPGTLLSVAVDLTLPSEQVVTLPVGDWRPDRLALHKRPAIFSL
LAR
>Mature_242_residues
AGTLYLIPNTLGLRDADDPLPEVIPAGVQQITARLDYFVAEHAKTARALLKKLAETAPLTHALQDITIRELNVKTPESEL
EALLAPVVGGRDGGLMSEAGVPAVADPGANLVRLAHRHGVRVKPLVGPSSILLAVMASGLNGQSFAFNGYLPVDAGERVR
KLRALEQASRAAGQTQVFIETPYRNGALLEAIQAACSPGTLLSVAVDLTLPSEQVVTLPVGDWRPDRLALHKRPAIFSLL
AR

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=222, Percent_Identity=31.981981981982, Blast_Score=88, Evalue=6e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 25805; Mature: 25674

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGTLYLIPNTLGLRDADDPLPEVIPAGVQQITARLDYFVAEHAKTARALLKKLAETAPL
CCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
THALQDITIRELNVKTPESELEALLAPVVGGRDGGLMSEAGVPAVADPGANLVRLAHRHG
HHHHHHCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC
VRVKPLVGPSSILLAVMASGLNGQSFAFNGYLPVDAGERVRKLRALEQASRAAGQTQVFI
CEEEECCCHHHHHHHHHHCCCCCCCEEECCEEECCHHHHHHHHHHHHHHHHHCCCEEEEE
ETPYRNGALLEAIQAACSPGTLLSVAVDLTLPSEQVVTLPVGDWRPDRLALHKRPAIFSL
ECCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEECCCCCCCHHHHHCCCHHHHH
LAR
HCC
>Mature Secondary Structure 
AGTLYLIPNTLGLRDADDPLPEVIPAGVQQITARLDYFVAEHAKTARALLKKLAETAPL
CCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
THALQDITIRELNVKTPESELEALLAPVVGGRDGGLMSEAGVPAVADPGANLVRLAHRHG
HHHHHHCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC
VRVKPLVGPSSILLAVMASGLNGQSFAFNGYLPVDAGERVRKLRALEQASRAAGQTQVFI
CEEEECCCHHHHHHHHHHCCCCCCCEEECCEEECCHHHHHHHHHHHHHHHHHCCCEEEEE
ETPYRNGALLEAIQAACSPGTLLSVAVDLTLPSEQVVTLPVGDWRPDRLALHKRPAIFSL
ECCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEECCCCCCCHHHHHCCCHHHHH
LAR
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]