| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is gltI [H]
Identifier: 17545692
GI number: 17545692
Start: 1020995
End: 1021906
Strand: Reverse
Name: gltI [H]
Synonym: RSc0973
Alternate gene names: 17545692
Gene position: 1021906-1020995 (Counterclockwise)
Preceding gene: 17545693
Following gene: 17545689
Centisome position: 27.5
GC content: 63.05
Gene sequence:
>912_bases ATGCTGTTCGTCTCACGCACGCTGCCTGCGGCCGCGCTGCTTTGCACTTCGCTGTCCATCTTTTCGCCGGGCACCGCCCT GGCATCCACCACACCCGTCCTCGACCGCATCCGCGACACCGGCATCGTCCGCATCGCGCATCGCGAAAGCGCCTCGCCCT TCTCGTACTACGACGCCGACAAAAAACCCGTCGGCTACGCAGTGGACCTGTGCCTGCGCGTGGTCGACAAGCTGCGCACG GAGCTCAAGCGGCCCGACCTGAAGGTGCAGTACGTCCTGGTCACGCCATCGACCCGCATCCCCACGATCCAGGAGGGCAA GGCCGATCTCGAATGCAGCACGACCACCAACAACCGCGAGCGCCGCGAACAGGTCGCGTTCACCATTCCGCACTACATCG CGGGCATCCGCATGCTGGTCAAGACCGCGTCGGGCATCCACAGGTGGGACGACCTGCGCGACAAGACCGTGGTCTCGACC AAGGGCACCACCAGCGTCGCCGAGCTGCGCAAGATGAACGACTCGCGCGTGCTGCGTATCAAGTTCGAGGAAGTGAAGGA GCATGCCGAGGCCTTCGCCATGGTGGAATCCGGCAAGGCCGATGCGTTCGTCATGGATGACGTGCAGCTCTACAGCTTCC GCGCCAACGCGAAGCATCCGCAGGACTACACCGTGGTGGGCGACATGATGACGGTCGAGCCCTACGCGATCATGCTCAGC AAGAGCGATCCCGACTTCAAGCGCATGGTCGACCGAGCCATGACCGCCATCATCCTCGACTACGACGCCGAGAAGCTCTA CAAGAAGTGGTTCCAGCAACCGATCCCGCCCAACAGCGCGAAGCTCGACATGCCGATGAACTTCCTGCTGCGGGATTCGT TCAAGTACCCGAGCGACAAGGTCGCCGACTGA
Upstream 100 bases:
>100_bases CACACGATTGCGCCGCGCCGTATCATGCAGCAGGCCCTCCGGCCATGAGCCGGGTACAACTAAAAGGCGGGCCGCCGATC CTATTCCGGGGGAAACAACC
Downstream 100 bases:
>100_bases CCTCGGGCCGCGGCGGCCGCGCATCGGCCGCCGCGGCGCGCGACGGCCGTGCGCGTCAGCGCTGCCCCGGCAGCATCGGC TTGCCGAGCATGCGCGACAG
Product: amino-acid-binding periplasmic (PBP) ABC transporter protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MLFVSRTLPAAALLCTSLSIFSPGTALASTTPVLDRIRDTGIVRIAHRESASPFSYYDADKKPVGYAVDLCLRVVDKLRT ELKRPDLKVQYVLVTPSTRIPTIQEGKADLECSTTTNNRERREQVAFTIPHYIAGIRMLVKTASGIHRWDDLRDKTVVST KGTTSVAELRKMNDSRVLRIKFEEVKEHAEAFAMVESGKADAFVMDDVQLYSFRANAKHPQDYTVVGDMMTVEPYAIMLS KSDPDFKRMVDRAMTAIILDYDAEKLYKKWFQQPIPPNSAKLDMPMNFLLRDSFKYPSDKVAD
Sequences:
>Translated_303_residues MLFVSRTLPAAALLCTSLSIFSPGTALASTTPVLDRIRDTGIVRIAHRESASPFSYYDADKKPVGYAVDLCLRVVDKLRT ELKRPDLKVQYVLVTPSTRIPTIQEGKADLECSTTTNNRERREQVAFTIPHYIAGIRMLVKTASGIHRWDDLRDKTVVST KGTTSVAELRKMNDSRVLRIKFEEVKEHAEAFAMVESGKADAFVMDDVQLYSFRANAKHPQDYTVVGDMMTVEPYAIMLS KSDPDFKRMVDRAMTAIILDYDAEKLYKKWFQQPIPPNSAKLDMPMNFLLRDSFKYPSDKVAD >Mature_303_residues MLFVSRTLPAAALLCTSLSIFSPGTALASTTPVLDRIRDTGIVRIAHRESASPFSYYDADKKPVGYAVDLCLRVVDKLRT ELKRPDLKVQYVLVTPSTRIPTIQEGKADLECSTTTNNRERREQVAFTIPHYIAGIRMLVKTASGIHRWDDLRDKTVVST KGTTSVAELRKMNDSRVLRIKFEEVKEHAEAFAMVESGKADAFVMDDVQLYSFRANAKHPQDYTVVGDMMTVEPYAIMLS KSDPDFKRMVDRAMTAIILDYDAEKLYKKWFQQPIPPNSAKLDMPMNFLLRDSFKYPSDKVAD
Specific function: Part of the binding-protein-dependent transport system for glutamate and aspartate. Binds to both aspartate and glutamate [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1786876, Length=271, Percent_Identity=40.9594095940959, Blast_Score=231, Evalue=6e-62, Organism=Escherichia coli, GI1787031, Length=222, Percent_Identity=27.027027027027, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1788228, Length=241, Percent_Identity=22.4066390041494, Blast_Score=61, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 34300; Mature: 34300
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFVSRTLPAAALLCTSLSIFSPGTALASTTPVLDRIRDTGIVRIAHRESASPFSYYDAD CEEECCCCHHHHHHHHHHHHCCCCCHHHCCCHHHHHHCCCCEEEEEECCCCCCCCCCCCC KKPVGYAVDLCLRVVDKLRTELKRPDLKVQYVLVTPSTRIPTIQEGKADLECSTTTNNRE CCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCEEEECCCCCHH RREQVAFTIPHYIAGIRMLVKTASGIHRWDDLRDKTVVSTKGTTSVAELRKMNDSRVLRI HHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHCCCCEEEEE KFEEVKEHAEAFAMVESGKADAFVMDDVQLYSFRANAKHPQDYTVVGDMMTVEPYAIMLS EHHHHHHHHHHHHHHHCCCCCEEEECCEEEEEEECCCCCCCCEEEECCEEEECCEEEEEE KSDPDFKRMVDRAMTAIILDYDAEKLYKKWFQQPIPPNSAKLDMPMNFLLRDSFKYPSDK CCCCHHHHHHHHHHHHEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHCCCCCCCCC VAD CCC >Mature Secondary Structure MLFVSRTLPAAALLCTSLSIFSPGTALASTTPVLDRIRDTGIVRIAHRESASPFSYYDAD CEEECCCCHHHHHHHHHHHHCCCCCHHHCCCHHHHHHCCCCEEEEEECCCCCCCCCCCCC KKPVGYAVDLCLRVVDKLRTELKRPDLKVQYVLVTPSTRIPTIQEGKADLECSTTTNNRE CCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCEEEECCCCCHH RREQVAFTIPHYIAGIRMLVKTASGIHRWDDLRDKTVVSTKGTTSVAELRKMNDSRVLRI HHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHCCCCEEEEE KFEEVKEHAEAFAMVESGKADAFVMDDVQLYSFRANAKHPQDYTVVGDMMTVEPYAIMLS EHHHHHHHHHHHHHHHCCCCCEEEECCEEEEEEECCCCCCCCEEEECCEEEECCEEEEEE KSDPDFKRMVDRAMTAIILDYDAEKLYKKWFQQPIPPNSAKLDMPMNFLLRDSFKYPSDK CCCCHHHHHHHHHHHHEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHCCCCCCCCC VAD CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 10493123; 1091635; 1091636 [H]