Click here to switch to the map view.

The map label for this gene is 17545650

Identifier: 17545650

GI number: 17545650

Start: 982417

End: 982821

Strand: Reverse

Name: 17545650

Synonym: RSc0931

Alternate gene names: NA

Gene position: 982821-982417 (Counterclockwise)

Preceding gene: 17545651

Following gene: 17545649

Centisome position: 26.45

GC content: 71.85

Gene sequence:

>405_bases
ATGCCGATCCGCGCATTGCTCAGCACTCTTGCGGCGGGTGCTCTGATCGTCGCCTCTGCGGGCGCCCTGGCTGCCAACGC
AACGACGCGTCAGGCATCCGTTGCGCTCGATTCTCCGGCACCGCCCTGGGCCCAACCTGCCGAGGCGCCAGCACCGCAAG
CCCGCTCCCTGCTGGCACAGGTCTTCTTCGTCGACGCACGCGGCGACCAGGCCGCCCGCATCCGCGCGCAGATGGAGCGC
ATGGAAGCGCGCGCCCGCGCCGATGACCGCCTGAACGGCCGCGTCCAGCCCCGCGAAGGCGGCGGCCGCGGCGACTGGCA
ACAACAGCAGGATCAGCAGATGCGCCAGGAACGCGGCAACCCGCCCGGTGGCTACGGCAACTGGCACGGCAACCGGCGCG
GCTGA

Upstream 100 bases:

>100_bases
TACATTGACACACATGGACATGCACCGCCACCCGTCTGCAACTGCCCGGCATCCGTGCGGCATGCGTCCCTTCCGATCAC
TTGTCCGACAGGAGCCAGCC

Downstream 100 bases:

>100_bases
TTGCCCGGCCCCGCACGCCCCGACGCCACGCCGAGGAACCCGGCCAAGGCCGCCCGGTCGGACTGGATAGCTGCGGCAAC
CGTTTGGCATGCCGCGACCA

Product: signal peptide protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MPIRALLSTLAAGALIVASAGALAANATTRQASVALDSPAPPWAQPAEAPAPQARSLLAQVFFVDARGDQAARIRAQMER
MEARARADDRLNGRVQPREGGGRGDWQQQQDQQMRQERGNPPGGYGNWHGNRRG

Sequences:

>Translated_134_residues
MPIRALLSTLAAGALIVASAGALAANATTRQASVALDSPAPPWAQPAEAPAPQARSLLAQVFFVDARGDQAARIRAQMER
MEARARADDRLNGRVQPREGGGRGDWQQQQDQQMRQERGNPPGGYGNWHGNRRG
>Mature_133_residues
PIRALLSTLAAGALIVASAGALAANATTRQASVALDSPAPPWAQPAEAPAPQARSLLAQVFFVDARGDQAARIRAQMERM
EARARADDRLNGRVQPREGGGRGDWQQQQDQQMRQERGNPPGGYGNWHGNRRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14377; Mature: 14246

Theoretical pI: Translated: 11.83; Mature: 11.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIRALLSTLAAGALIVASAGALAANATTRQASVALDSPAPPWAQPAEAPAPQARSLLAQ
CCHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHH
VFFVDARGDQAARIRAQMERMEARARADDRLNGRVQPREGGGRGDWQQQQDQQMRQERGN
HHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC
PPGGYGNWHGNRRG
CCCCCCCCCCCCCC
>Mature Secondary Structure 
PIRALLSTLAAGALIVASAGALAANATTRQASVALDSPAPPWAQPAEAPAPQARSLLAQ
CHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHH
VFFVDARGDQAARIRAQMERMEARARADDRLNGRVQPREGGGRGDWQQQQDQQMRQERGN
HHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC
PPGGYGNWHGNRRG
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA