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The map label for this gene is dadA

Identifier: 17545645

GI number: 17545645

Start: 978179

End: 979468

Strand: Reverse

Name: dadA

Synonym: RSc0926

Alternate gene names: 17545645

Gene position: 979468-978179 (Counterclockwise)

Preceding gene: 17545648

Following gene: 17545637

Centisome position: 26.36

GC content: 68.99

Gene sequence:

>1290_bases
ATGCGCGTGCTCGTTCTTGGCAGCGGCGTCATCGGCGTGACCAGCGCCTATTATCTGGCCCGCGCGGGCCACGAGGTCAC
GGTCGTCGACCGCGAGGCCGGTCCTGCGCTCGACACGAGCTTCGCCAATGCCGGCCAGATCTCGCCGGGCTATGCATCGC
CGTGGGCCGCGCCGGGCGTGCCGCTCAAGGCCATCAAGTGGATGTTCCAGCAGCACGCACCGCTGTCCATCCGCCCTGAC
GGCACCCTCTTCCAGTTGCAATGGATGTGGCAGATGCTGCGCAACTGCAACGCCGCCAGCTATGCCGAGAACAAGGAACG
GATGGTCCGCCTGGCCGAGTACAGCCGCGACTGCATCCGCGCCCTGCGCGCCGAGACCGGCATCGCCTATGAAGGCCGCC
AGCAAGGCACGCTGCAGGTGTTCCGCACCCAGCAGCAGCTCGATGGCGCCGCGAACGACATCGCGGTGCTCGAGCGCGCC
GGCGTGCCCTACGAACTGCTATCGCGCGACGACCTCGTGCGCAGTGAACCGGGCCTGGCCTCCACCCGCCACAAGCTGGC
CGGCGGCCTGCGCCTGCCCAACGACGAAACGGGCGACTGCCAGCTCTTCACCACGCGCCTGGCCGCGATGGCCGAGAAGC
TGGGCGTGCGCTTCCGTTTCAACAGCCGCATCAACAGCCTGATCGTGCAGAACGATGCCGTGCGCGGCGCGCTGGTCGAT
GGCGAAGCAATGACCGCCGACCTGGTGGTGGTCGCGATGGGCAGCTACAGCACGCCGTTCCTGAAGAACCTGGTGGGTGT
GCCGGTCTATCCGCTCAAGGGCTTCTCGATCACCGTGCCGATGACCGATGCCGAGCGCAGCCCGGTCTCCACGGTGCTGG
ATGAGACCTACAAGGTGGCGATCACGCGCTTCGACGACCGCATCCGCGTGGGCGGCATGGCGCAGATCGTCGGCTACGAC
AAGCGCCTGGATCCGGGCAAGCGCAAGACGCTGGAGTTCGTCGTGAGCGACCTGTTCCCCGGCGGCGGCGACGTCTCGCG
CGCCACGTTCTGGACCGGCCTGCGCCCGATGACGCCGGACGGCACGCCGATCGTCGGCCCGACGCCGGTGCGCGGCCTGT
GGATCAACACCGGGCACGGCACGCTGGGCTGGACCATGGCGTGCGGCTCGGGCCAACTGCTGTCGGACCTCGTTTCGGGC
CGCTCGCCCGCCATCCGCGCGGACGACCTGTCGGTCTATCGCTACCTGCGCGGCGGCCAGGCACCGGCGACCAAGCCTGC
GCTGGCCTGA

Upstream 100 bases:

>100_bases
AATTTATTCCTGTTTTTCAGGAATATACAGAAACAATTTGCACAAAGGTGGGAATACGATAGCGCCATCTATCGCGATAG
CATCTCCGGGGAGTATCACC

Downstream 100 bases:

>100_bases
ACGCCGGCGCGGCGCCAATGAGAAGGGAGGCCGAAGCCTCCCTTTTTTCATGCCGGCAACGCCGGCTCAGAACTGCGCTT
CCGGCACGGCGCCGATGGTC

Product: D-amino acid dehydrogenase small subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MRVLVLGSGVIGVTSAYYLARAGHEVTVVDREAGPALDTSFANAGQISPGYASPWAAPGVPLKAIKWMFQQHAPLSIRPD
GTLFQLQWMWQMLRNCNAASYAENKERMVRLAEYSRDCIRALRAETGIAYEGRQQGTLQVFRTQQQLDGAANDIAVLERA
GVPYELLSRDDLVRSEPGLASTRHKLAGGLRLPNDETGDCQLFTTRLAAMAEKLGVRFRFNSRINSLIVQNDAVRGALVD
GEAMTADLVVVAMGSYSTPFLKNLVGVPVYPLKGFSITVPMTDAERSPVSTVLDETYKVAITRFDDRIRVGGMAQIVGYD
KRLDPGKRKTLEFVVSDLFPGGGDVSRATFWTGLRPMTPDGTPIVGPTPVRGLWINTGHGTLGWTMACGSGQLLSDLVSG
RSPAIRADDLSVYRYLRGGQAPATKPALA

Sequences:

>Translated_429_residues
MRVLVLGSGVIGVTSAYYLARAGHEVTVVDREAGPALDTSFANAGQISPGYASPWAAPGVPLKAIKWMFQQHAPLSIRPD
GTLFQLQWMWQMLRNCNAASYAENKERMVRLAEYSRDCIRALRAETGIAYEGRQQGTLQVFRTQQQLDGAANDIAVLERA
GVPYELLSRDDLVRSEPGLASTRHKLAGGLRLPNDETGDCQLFTTRLAAMAEKLGVRFRFNSRINSLIVQNDAVRGALVD
GEAMTADLVVVAMGSYSTPFLKNLVGVPVYPLKGFSITVPMTDAERSPVSTVLDETYKVAITRFDDRIRVGGMAQIVGYD
KRLDPGKRKTLEFVVSDLFPGGGDVSRATFWTGLRPMTPDGTPIVGPTPVRGLWINTGHGTLGWTMACGSGQLLSDLVSG
RSPAIRADDLSVYRYLRGGQAPATKPALA
>Mature_429_residues
MRVLVLGSGVIGVTSAYYLARAGHEVTVVDREAGPALDTSFANAGQISPGYASPWAAPGVPLKAIKWMFQQHAPLSIRPD
GTLFQLQWMWQMLRNCNAASYAENKERMVRLAEYSRDCIRALRAETGIAYEGRQQGTLQVFRTQQQLDGAANDIAVLERA
GVPYELLSRDDLVRSEPGLASTRHKLAGGLRLPNDETGDCQLFTTRLAAMAEKLGVRFRFNSRINSLIVQNDAVRGALVD
GEAMTADLVVVAMGSYSTPFLKNLVGVPVYPLKGFSITVPMTDAERSPVSTVLDETYKVAITRFDDRIRVGGMAQIVGYD
KRLDPGKRKTLEFVVSDLFPGGGDVSRATFWTGLRPMTPDGTPIVGPTPVRGLWINTGHGTLGWTMACGSGQLLSDLVSG
RSPAIRADDLSVYRYLRGGQAPATKPALA

Specific function: Oxidative deamination of D-amino acids

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family

Homologues:

Organism=Escherichia coli, GI1787438, Length=418, Percent_Identity=68.1818181818182, Blast_Score=604, Evalue=1e-174,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DADA1_RALSO (Q8Y0W7)

Other databases:

- EMBL:   AL646052
- RefSeq:   NP_519047.1
- ProteinModelPortal:   Q8Y0W7
- GeneID:   1219734
- GenomeReviews:   AL646052_GR
- KEGG:   rso:RSc0926
- NMPDR:   fig|267608.1.peg.926
- HOGENOM:   HBG729204
- OMA:   WQMLQNC
- ProtClustDB:   PRK00711
- BioCyc:   RSOL267608:RSC0926-MONOMER
- BRENDA:   1.4.99.1
- HAMAP:   MF_01202
- InterPro:   IPR023080
- InterPro:   IPR006076

Pfam domain/function: PF01266 DAO

EC number: =1.4.99.1

Molecular weight: Translated: 46535; Mature: 46535

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVLVLGSGVIGVTSAYYLARAGHEVTVVDREAGPALDTSFANAGQISPGYASPWAAPGV
CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PLKAIKWMFQQHAPLSIRPDGTLFQLQWMWQMLRNCNAASYAENKERMVRLAEYSRDCIR
CHHHHHHHHHCCCCEEECCCCCEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
ALRAETGIAYEGRQQGTLQVFRTQQQLDGAANDIAVLERAGVPYELLSRDDLVRSEPGLA
HHHHHCCCEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHCCCCHHCCCCCCH
STRHKLAGGLRLPNDETGDCQLFTTRLAAMAEKLGVRFRFNSRINSLIVQNDAVRGALVD
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCEEEEECCCCCEEEEECCCCCEEEEC
GEAMTADLVVVAMGSYSTPFLKNLVGVPVYPLKGFSITVPMTDAERSPVSTVLDETYKVA
CCCCEEEEEEEEECCCCCHHHHHHHCCCCEEECCCEEEEECCCCCCCHHHHHHHCHHEEE
ITRFDDRIRVGGMAQIVGYDKRLDPGKRKTLEFVVSDLFPGGGDVSRATFWTGLRPMTPD
EEEECCCEEECCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCC
GTPIVGPTPVRGLWINTGHGTLGWTMACGSGQLLSDLVSGRSPAIRADDLSVYRYLRGGQ
CCCCCCCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHCCCCCCEECCHHHHHHHHHCCC
APATKPALA
CCCCCCCCC
>Mature Secondary Structure
MRVLVLGSGVIGVTSAYYLARAGHEVTVVDREAGPALDTSFANAGQISPGYASPWAAPGV
CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PLKAIKWMFQQHAPLSIRPDGTLFQLQWMWQMLRNCNAASYAENKERMVRLAEYSRDCIR
CHHHHHHHHHCCCCEEECCCCCEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
ALRAETGIAYEGRQQGTLQVFRTQQQLDGAANDIAVLERAGVPYELLSRDDLVRSEPGLA
HHHHHCCCEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHCCCCHHCCCCCCH
STRHKLAGGLRLPNDETGDCQLFTTRLAAMAEKLGVRFRFNSRINSLIVQNDAVRGALVD
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCEEEEECCCCCEEEEECCCCCEEEEC
GEAMTADLVVVAMGSYSTPFLKNLVGVPVYPLKGFSITVPMTDAERSPVSTVLDETYKVA
CCCCEEEEEEEEECCCCCHHHHHHHCCCCEEECCCEEEEECCCCCCCHHHHHHHCHHEEE
ITRFDDRIRVGGMAQIVGYDKRLDPGKRKTLEFVVSDLFPGGGDVSRATFWTGLRPMTPD
EEEECCCEEECCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCC
GTPIVGPTPVRGLWINTGHGTLGWTMACGSGQLLSDLVSGRSPAIRADDLSVYRYLRGGQ
CCCCCCCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHCCCCCCEECCHHHHHHHHHCCC
APATKPALA
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11823852