| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17545569
Identifier: 17545569
GI number: 17545569
Start: 888955
End: 889449
Strand: Reverse
Name: 17545569
Synonym: RSc0850
Alternate gene names: NA
Gene position: 889449-888955 (Counterclockwise)
Preceding gene: 17545570
Following gene: 17545568
Centisome position: 23.93
GC content: 64.44
Gene sequence:
>495_bases ATGACGACGCAACAACTGACCCCGGCACAGCACGCCATCCTCGCCTACGCCATCCAGCACACCAGCGGCAAGATCGAATG GTTCCCCGACAACATCAAAGGCGGGGCGCGCAAGAAGGTGCTCGAAGGCTTGATCAAACGGGACCTGATTGCCACCGCCG GCGACGATTGGCTGGTTGCAGCCGAAGGCTACAACGCACTGGGGCTCAAAGCACCGCAGCCCGAAGAACCCGCTCCAGAG GCCGAGCCGGCGCGCAAGACACCGCGCACGCGCGAGAACAGCAAGCAGGCCCAGGTAATCGCGATGCTGCGCCACCCGGA AGGGGCAACGATCACCGAAATCTGCACGGCCACCGGCTGGCAAGCCCACACCGTGCGCGGCGCGTTTGCCGGCACCTTCA AGAAGCGGCTCGGGCTGACGATCGTCTCCGAGAAATCGGTCGGCAGCGAACGCGTCTACCGGATCGTAACCGAAGACGGC GACCAATCGGCCTGA
Upstream 100 bases:
>100_bases GTCCTCGCTGAATACGGTGGAGCCAAGCAGATCGCGCTTGGCTTCTCCGCCGAACAGCGCGTTCATCACAACACGTTCAA ACCACCTCGAAGGAACAAAC
Downstream 100 bases:
>100_bases CGGCGTACGGGGCCGACTGCGATTGCGGCGGCCCCGCATAAAGCTGGGGACAGCGCTTGGCTTGTGGCCGGAACAGCGCG TTCATGTCGTTGTCGTGATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MTTQQLTPAQHAILAYAIQHTSGKIEWFPDNIKGGARKKVLEGLIKRDLIATAGDDWLVAAEGYNALGLKAPQPEEPAPE AEPARKTPRTRENSKQAQVIAMLRHPEGATITEICTATGWQAHTVRGAFAGTFKKRLGLTIVSEKSVGSERVYRIVTEDG DQSA
Sequences:
>Translated_164_residues MTTQQLTPAQHAILAYAIQHTSGKIEWFPDNIKGGARKKVLEGLIKRDLIATAGDDWLVAAEGYNALGLKAPQPEEPAPE AEPARKTPRTRENSKQAQVIAMLRHPEGATITEICTATGWQAHTVRGAFAGTFKKRLGLTIVSEKSVGSERVYRIVTEDG DQSA >Mature_163_residues TTQQLTPAQHAILAYAIQHTSGKIEWFPDNIKGGARKKVLEGLIKRDLIATAGDDWLVAAEGYNALGLKAPQPEEPAPEA EPARKTPRTRENSKQAQVIAMLRHPEGATITEICTATGWQAHTVRGAFAGTFKKRLGLTIVSEKSVGSERVYRIVTEDGD QSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17816; Mature: 17685
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTQQLTPAQHAILAYAIQHTSGKIEWFPDNIKGGARKKVLEGLIKRDLIATAGDDWLVA CCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEE AEGYNALGLKAPQPEEPAPEAEPARKTPRTRENSKQAQVIAMLRHPEGATITEICTATGW ECCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEEEECCCCCHHHHHHHCCCC QAHTVRGAFAGTFKKRLGLTIVSEKSVGSERVYRIVTEDGDQSA CCEEEHHHHHHHHHHHHCEEEEECCCCCCCCEEEEEECCCCCCC >Mature Secondary Structure TTQQLTPAQHAILAYAIQHTSGKIEWFPDNIKGGARKKVLEGLIKRDLIATAGDDWLVA CCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEE AEGYNALGLKAPQPEEPAPEAEPARKTPRTRENSKQAQVIAMLRHPEGATITEICTATGW ECCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEEEECCCCCHHHHHHHCCCC QAHTVRGAFAGTFKKRLGLTIVSEKSVGSERVYRIVTEDGDQSA CCEEEHHHHHHHHHHHHCEEEEECCCCCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA