| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17545552
Identifier: 17545552
GI number: 17545552
Start: 876464
End: 876754
Strand: Direct
Name: 17545552
Synonym: RSc0833
Alternate gene names: NA
Gene position: 876464-876754 (Clockwise)
Preceding gene: 17545551
Following gene: 17545553
Centisome position: 23.58
GC content: 67.01
Gene sequence:
>291_bases ATGTCGTCTGAACAGACCCTCGACGCCTCCGGGCGTCCCCATCTGACCCCGCGAGACCTCGCCCTCCGCTGGGGCAAGGC CGCAGCCACCATCGCACGCTATCGCTCGGACGGCTGCGGCCCGCGATTCCTCAAGATCGGCGGCGCCGTGCTGTACCGCC AGGAAGATGTCGAGCGCTTCGAGCTCGAGAACCTCTTCGCCAGCTCGAGCAGCCGGTCCGAGGAAACCGAGCGTGACATC GCCACGTGCCAACCCGCCACAGCCCAGTACCTGCAAGGAGCCGCAGAATGA
Upstream 100 bases:
>100_bases ACGGTCTGAGTAATCCCGTTCGAGACGATACGGACATCGGTTGCAGCGCTGGCGCAAGCCCTCGCAACCGGTGTGTATCC ACCCTTGAACGAAAGATTCC
Downstream 100 bases:
>100_bases ACCTCGTCGCACTCCAACACGCCATGCACCTTCCCCCGGCGCACTACGCCGAGGCGCCGCTGGACACGTACCGTCAGTTC ATCGCCCAAGTCGAGCAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MSSEQTLDASGRPHLTPRDLALRWGKAAATIARYRSDGCGPRFLKIGGAVLYRQEDVERFELENLFASSSSRSEETERDI ATCQPATAQYLQGAAE
Sequences:
>Translated_96_residues MSSEQTLDASGRPHLTPRDLALRWGKAAATIARYRSDGCGPRFLKIGGAVLYRQEDVERFELENLFASSSSRSEETERDI ATCQPATAQYLQGAAE >Mature_95_residues SSEQTLDASGRPHLTPRDLALRWGKAAATIARYRSDGCGPRFLKIGGAVLYRQEDVERFELENLFASSSSRSEETERDIA TCQPATAQYLQGAAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10579; Mature: 10448
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSEQTLDASGRPHLTPRDLALRWGKAAATIARYRSDGCGPRFLKIGGAVLYRQEDVERF CCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHCCCCCCCEEHHCCCCEECHHHHHHH ELENLFASSSSRSEETERDIATCQPATAQYLQGAAE HHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHCCCCC >Mature Secondary Structure SSEQTLDASGRPHLTPRDLALRWGKAAATIARYRSDGCGPRFLKIGGAVLYRQEDVERF CCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHCCCCCCCEEHHCCCCEECHHHHHHH ELENLFASSSSRSEETERDIATCQPATAQYLQGAAE HHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA