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The map label for this gene is popP [H]

Identifier: 17545545

GI number: 17545545

Start: 867210

End: 868316

Strand: Direct

Name: popP [H]

Synonym: RSc0826

Alternate gene names: 17545545

Gene position: 867210-868316 (Clockwise)

Preceding gene: 17545544

Following gene: 17545549

Centisome position: 23.33

GC content: 55.47

Gene sequence:

>1107_bases
ATGAAAAGACTATTCAGAGCATTGGGCGTCAGTCAACCGACTAGGACGTATACACCCACAACGGACACAACCTCCCCTGC
AGCCGCAACGCCGGAGAGTTCACGCAATTCGTCCCCGGAGAGCTCGCGAAGCCCGTCCCCGGTCCGTTCTCGCTCCCGCA
ATCATCCTGACCTGAGCGACTTGCCGAGTCGGCCTCGAAGGAAAGCTGAAATGCTGGCTGAGTCAATCCAGAGCGCACGC
GATAGAGGGGTGGATCCCGAGTTCATTTCGTACGCGGAGACAACGCTGCACAACCTCGCGAGTCATACTCAGCCGTCCGT
CATGGAAACAAATCTGGACATCCGGCACCTCGACACCATCGTGCAGTCCTACCGGTACAACAACCTGAACCTTCAGGCGT
TCAATTCAAGGGAGGCATTTGTGGCGTCCCTCGTTGAAGGACAGGGCTCGGGACGGGCGGAGCGTGGCGTGGTAAGAGAC
TACCCGAACCTCCACCACTTCGCAGCAGATGTCCGGCATCACGAAGATGGGCGAACCACTGTCATTATCTTGGAGCCGGC
CTCAGCGGGGAATCAGGAAAATCTGCCGGGCTATACCGAACTGGCGAGTGCACTGAGGTATAACCTCGGCTCCCAATGCA
GGATGGTCGTGATAGAAGCAGAGGCGCAAAAGTCCCTTTCAGACTGTGTTGCCTTTGCACTGGATTTTGCGCTTGCTGCC
TATCAGGAACGCAGAACGACTTTCGATCAGTGGCATGAGAACTTGGCTGCGTACGGGACTATCGCTGACAACGGTGTTCA
AGATAAAAAGTACGGTCCTTTTGATCGAGGGCTGTACCACAACTACGGTATCCATCTGATTAAGGGGTGGGGTGTGCTTC
CACCAGTGTTCTACAAGCATGCGCACTCCCGTGAGACGCTTAAAGGAGTCGAGAAAAGACAACCTGGCAGCCTGGAAACG
GACGTTAGTACAGGTCGCAACAAGGATGGGGCAGAGTCTCTGGAAGAGCGTATGGAGGCGTTCTCTGATAGGCATGGCTT
CAGACCTCGCAATATCTCGATCGAGGCATCGAGAGCGCGAAAAATTCGACATGCCCTGGAGTCGTGA

Upstream 100 bases:

>100_bases
GCGCGTGGCTGGTCCTGCACTGTGCTAAGCCATCTGCGGTCGTTTTGTGTCTGGGCTATTTGTCCAACAAGAGAACGGTT
AGAAGTGGAATCTCGCAACG

Downstream 100 bases:

>100_bases
CACGCCGGTGGCCGAGTCGTTTGGGTATTCATGCGTCTGAAGGTGGCGTGTCTGTGGCATGGAGGTCAAACGTCTCAAAG
CCGTAGCAGCTACTTCCTTT

Product: POPP protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MKRLFRALGVSQPTRTYTPTTDTTSPAAATPESSRNSSPESSRSPSPVRSRSRNHPDLSDLPSRPRRKAEMLAESIQSAR
DRGVDPEFISYAETTLHNLASHTQPSVMETNLDIRHLDTIVQSYRYNNLNLQAFNSREAFVASLVEGQGSGRAERGVVRD
YPNLHHFAADVRHHEDGRTTVIILEPASAGNQENLPGYTELASALRYNLGSQCRMVVIEAEAQKSLSDCVAFALDFALAA
YQERRTTFDQWHENLAAYGTIADNGVQDKKYGPFDRGLYHNYGIHLIKGWGVLPPVFYKHAHSRETLKGVEKRQPGSLET
DVSTGRNKDGAESLEERMEAFSDRHGFRPRNISIEASRARKIRHALES

Sequences:

>Translated_368_residues
MKRLFRALGVSQPTRTYTPTTDTTSPAAATPESSRNSSPESSRSPSPVRSRSRNHPDLSDLPSRPRRKAEMLAESIQSAR
DRGVDPEFISYAETTLHNLASHTQPSVMETNLDIRHLDTIVQSYRYNNLNLQAFNSREAFVASLVEGQGSGRAERGVVRD
YPNLHHFAADVRHHEDGRTTVIILEPASAGNQENLPGYTELASALRYNLGSQCRMVVIEAEAQKSLSDCVAFALDFALAA
YQERRTTFDQWHENLAAYGTIADNGVQDKKYGPFDRGLYHNYGIHLIKGWGVLPPVFYKHAHSRETLKGVEKRQPGSLET
DVSTGRNKDGAESLEERMEAFSDRHGFRPRNISIEASRARKIRHALES
>Mature_368_residues
MKRLFRALGVSQPTRTYTPTTDTTSPAAATPESSRNSSPESSRSPSPVRSRSRNHPDLSDLPSRPRRKAEMLAESIQSAR
DRGVDPEFISYAETTLHNLASHTQPSVMETNLDIRHLDTIVQSYRYNNLNLQAFNSREAFVASLVEGQGSGRAERGVVRD
YPNLHHFAADVRHHEDGRTTVIILEPASAGNQENLPGYTELASALRYNLGSQCRMVVIEAEAQKSLSDCVAFALDFALAA
YQERRTTFDQWHENLAAYGTIADNGVQDKKYGPFDRGLYHNYGIHLIKGWGVLPPVFYKHAHSRETLKGVEKRQPGSLET
DVSTGRNKDGAESLEERMEAFSDRHGFRPRNISIEASRARKIRHALES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase C55 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005083 [H]

Pfam domain/function: PF03421 YopJ [H]

EC number: NA

Molecular weight: Translated: 41189; Mature: 41189

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLFRALGVSQPTRTYTPTTDTTSPAAATPESSRNSSPESSRSPSPVRSRSRNHPDLSD
CHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHH
LPSRPRRKAEMLAESIQSARDRGVDPEFISYAETTLHNLASHTQPSVMETNLDIRHLDTI
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHH
VQSYRYNNLNLQAFNSREAFVASLVEGQGSGRAERGVVRDYPNLHHFAADVRHHEDGRTT
HHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCHHCCCHHCCCCHHHHHHHHHCCCCCCEE
VIILEPASAGNQENLPGYTELASALRYNLGSQCRMVVIEAEAQKSLSDCVAFALDFALAA
EEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHH
YQERRTTFDQWHENLAAYGTIADNGVQDKKYGPFDRGLYHNYGIHLIKGWGVLPPVFYKH
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCEEEEECCCCCCHHHHHH
AHSRETLKGVEKRQPGSLETDVSTGRNKDGAESLEERMEAFSDRHGFRPRNISIEASRAR
HCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHH
KIRHALES
HHHHHHCC
>Mature Secondary Structure
MKRLFRALGVSQPTRTYTPTTDTTSPAAATPESSRNSSPESSRSPSPVRSRSRNHPDLSD
CHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHH
LPSRPRRKAEMLAESIQSARDRGVDPEFISYAETTLHNLASHTQPSVMETNLDIRHLDTI
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHH
VQSYRYNNLNLQAFNSREAFVASLVEGQGSGRAERGVVRDYPNLHHFAADVRHHEDGRTT
HHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCHHCCCHHCCCCHHHHHHHHHCCCCCCEE
VIILEPASAGNQENLPGYTELASALRYNLGSQCRMVVIEAEAQKSLSDCVAFALDFALAA
EEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHH
YQERRTTFDQWHENLAAYGTIADNGVQDKKYGPFDRGLYHNYGIHLIKGWGVLPPVFYKH
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCEEEEECCCCCCHHHHHH
AHSRETLKGVEKRQPGSLETDVSTGRNKDGAESLEERMEAFSDRHGFRPRNISIEASRAR
HCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHH
KIRHALES
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8274773 [H]