| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17545489
Identifier: 17545489
GI number: 17545489
Start: 813151
End: 813642
Strand: Direct
Name: 17545489
Synonym: RSc0770
Alternate gene names: NA
Gene position: 813151-813642 (Clockwise)
Preceding gene: 17545488
Following gene: 17545490
Centisome position: 21.88
GC content: 72.15
Gene sequence:
>492_bases ATGCACACCCGTCCCCCCTCCAGTGACGGCGACGACCCGGCTGGCCTGACACGCCGCCAGTGGTTGCAGAGCGCGCTGGC TGCCACTGCCGCAAGCCTGGTGGGTTCGGTGACCTTGTACGCGGTCGCCCAGGCGCCCGGCGAGCCGCTCGATGCGTTCA TGGGATTGTCACAGGCGCTGACCGCCCGCTCCGCGCTGGACCGGGCCGTCGGCGCGCGGCTGCTGGCGGCGTTGCAGCAG GCGTCGGCCGGCTTCGCCGCGCAGCTCCGCCCGCTCGCGCAGTCGCTGGCGGCCGGCACGCTCTCCGGGCTGCAGCAGGA GACCGCGCTGCGCATCCTGCAGGCGTGGTACACCGGCGTGGTCGACGGCACGGTCGTCACCTATGAGCAGGCGCTGATGT ACGGCGTGGTGTCCGACATCCTGGTGATCCGCACGTATTGCCCCAACCGCCCCGGCTTCTGGGCCGAGCCCCCCGTGGAG AAGCAGAGCTGA
Upstream 100 bases:
>100_bases CGTTCCGGTCAGGCAACGTGCATCACCCGCGTAGCGCGAGGCGCAAGGCGAACAGCGAACGGCGCGCCCGCTGCTGCAAC GATTCCAATAAGGTGTCGAC
Downstream 100 bases:
>100_bases TGGCCGAGACCCGACAGGCCGAGCAGGCCGATATCGTGGTGGTGGGTTCCGGCGTGGCCGGCGCGCTGGTGGCGTACGAG CTGGCGCGCGCGGGCAAGTC
Product: transmembrane dehydrogenase (small subunit) oxidoreductase
Products: NA
Alternate protein names: Twin-Arginine Translocation Pathway Signal; Oxidoreductase; Transmembrane Dehydrogenase Protein
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MHTRPPSSDGDDPAGLTRRQWLQSALAATAASLVGSVTLYAVAQAPGEPLDAFMGLSQALTARSALDRAVGARLLAALQQ ASAGFAAQLRPLAQSLAAGTLSGLQQETALRILQAWYTGVVDGTVVTYEQALMYGVVSDILVIRTYCPNRPGFWAEPPVE KQS
Sequences:
>Translated_163_residues MHTRPPSSDGDDPAGLTRRQWLQSALAATAASLVGSVTLYAVAQAPGEPLDAFMGLSQALTARSALDRAVGARLLAALQQ ASAGFAAQLRPLAQSLAAGTLSGLQQETALRILQAWYTGVVDGTVVTYEQALMYGVVSDILVIRTYCPNRPGFWAEPPVE KQS >Mature_163_residues MHTRPPSSDGDDPAGLTRRQWLQSALAATAASLVGSVTLYAVAQAPGEPLDAFMGLSQALTARSALDRAVGARLLAALQQ ASAGFAAQLRPLAQSLAAGTLSGLQQETALRILQAWYTGVVDGTVVTYEQALMYGVVSDILVIRTYCPNRPGFWAEPPVE KQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17155; Mature: 17155
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTRPPSSDGDDPAGLTRRQWLQSALAATAASLVGSVTLYAVAQAPGEPLDAFMGLSQAL CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH TARSALDRAVGARLLAALQQASAGFAAQLRPLAQSLAAGTLSGLQQETALRILQAWYTGV HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VDGTVVTYEQALMYGVVSDILVIRTYCPNRPGFWAEPPVEKQS HCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MHTRPPSSDGDDPAGLTRRQWLQSALAATAASLVGSVTLYAVAQAPGEPLDAFMGLSQAL CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH TARSALDRAVGARLLAALQQASAGFAAQLRPLAQSLAAGTLSGLQQETALRILQAWYTGV HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VDGTVVTYEQALMYGVVSDILVIRTYCPNRPGFWAEPPVEKQS HCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA