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The map label for this gene is ybbM [C]

Identifier: 17545467

GI number: 17545467

Start: 793070

End: 793888

Strand: Reverse

Name: ybbM [C]

Synonym: RSc0748

Alternate gene names: 17545467

Gene position: 793888-793070 (Counterclockwise)

Preceding gene: 17545468

Following gene: 17545466

Centisome position: 21.36

GC content: 69.72

Gene sequence:

>819_bases
ATGAGCACACCCGCCCCCGAACAGATGCTCTCCGCCTGGCAGGTCGGCATTGCGGCCCTGCTGATCCTCGTCAACGGCGC
GCTGTCCATCGGCCTGGGCCTGGGGCTGGAACGCCGGCTGGCATGGGCGGCGGTGCGCACGGTCGTGCAATTGCTGCTGA
TCGGCTTCGTGCTGCAGTGGGTGTTTGCCAGCGCACACTGGGCCGTGGTGCTCGCGGTGATTGCGCTGATGACGCTGATT
GCCGGACACGCCACCGGCAGCCGCGGCGCTCGCGACTATGCCGGGCTGCGGCTGGACGGCACGCTGTCGGTATTTGGCAG
CACCTGGCTGATCGGGGCCATCGGGCTGGTGGCCGTGCTGCAGGCGCGGCCGTGGTACACGCCGCAATATGCGATCCCGA
TCATGGGCATGATCCTCGGCAACACGCTCACGGGCGTCGGCCTGGCGCTGGAACGGATGACCGGCGAACTGATCGCCACG
CGAGACCAGGTCGAGACCCTGCTGGCGCTCGGTGGCACGCGCTGGGAGGCGGCGCGCAACGCGGCCCGCGCGGCGGTGCG
CGCTGGCATGACACCGATCATCAACCAGATGTCGGTCGTGGGCGTGGTCAGCCTGCCGGGCATGATGACCGGCCAGGTGC
TGGCGGGACAATCGCCGCTGGAGGCGGTGCGCTACCAGATCGTGATCATGTTCCTGCTGGCCGCATCGTCGGGGCTGGGC
ACGGTGGCGGCGGTGCTGCTGGCATACCGGCGCCTGTTCAGCCGCGAGCACCAGCTGCTATCCGCGCGCATCGTCCAGCG
CGCGCCCGGCGTGCACTGA

Upstream 100 bases:

>100_bases
CAGGCGACGCGGATCGCCCACCGCTACTGGCGCGTCGCGGCCGGGTGCCTCGACACCCGGGCGCCTGTGCCGCAGCAGCC
TGAAACCTGAGGCCCGAACC

Downstream 100 bases:

>100_bases
CAATGGCCATCGCGCTCTCCTGCGGCCTCGTGCTGCTCAATGAAGATGCCGAGATCCTGCTCGCACACGCCACCGAGACG
CGCCACTGGGACATCCCCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MSTPAPEQMLSAWQVGIAALLILVNGALSIGLGLGLERRLAWAAVRTVVQLLLIGFVLQWVFASAHWAVVLAVIALMTLI
AGHATGSRGARDYAGLRLDGTLSVFGSTWLIGAIGLVAVLQARPWYTPQYAIPIMGMILGNTLTGVGLALERMTGELIAT
RDQVETLLALGGTRWEAARNAARAAVRAGMTPIINQMSVVGVVSLPGMMTGQVLAGQSPLEAVRYQIVIMFLLAASSGLG
TVAAVLLAYRRLFSREHQLLSARIVQRAPGVH

Sequences:

>Translated_272_residues
MSTPAPEQMLSAWQVGIAALLILVNGALSIGLGLGLERRLAWAAVRTVVQLLLIGFVLQWVFASAHWAVVLAVIALMTLI
AGHATGSRGARDYAGLRLDGTLSVFGSTWLIGAIGLVAVLQARPWYTPQYAIPIMGMILGNTLTGVGLALERMTGELIAT
RDQVETLLALGGTRWEAARNAARAAVRAGMTPIINQMSVVGVVSLPGMMTGQVLAGQSPLEAVRYQIVIMFLLAASSGLG
TVAAVLLAYRRLFSREHQLLSARIVQRAPGVH
>Mature_271_residues
STPAPEQMLSAWQVGIAALLILVNGALSIGLGLGLERRLAWAAVRTVVQLLLIGFVLQWVFASAHWAVVLAVIALMTLIA
GHATGSRGARDYAGLRLDGTLSVFGSTWLIGAIGLVAVLQARPWYTPQYAIPIMGMILGNTLTGVGLALERMTGELIATR
DQVETLLALGGTRWEAARNAARAAVRAGMTPIINQMSVVGVVSLPGMMTGQVLAGQSPLEAVRYQIVIMFLLAASSGLGT
VAAVLLAYRRLFSREHQLLSARIVQRAPGVH

Specific function: Unknown

COG id: COG0390

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0014 family [H]

Homologues:

Organism=Escherichia coli, GI87081746, Length=258, Percent_Identity=29.0697674418605, Blast_Score=138, Evalue=5e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005226 [H]

Pfam domain/function: PF03649 UPF0014 [H]

EC number: NA

Molecular weight: Translated: 28782; Mature: 28650

Theoretical pI: Translated: 11.61; Mature: 11.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPAPEQMLSAWQVGIAALLILVNGALSIGLGLGLERRLAWAAVRTVVQLLLIGFVLQW
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VFASAHWAVVLAVIALMTLIAGHATGSRGARDYAGLRLDGTLSVFGSTWLIGAIGLVAVL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCEEECCHHHHHHHHHHHHHHHHHHHH
QARPWYTPQYAIPIMGMILGNTLTGVGLALERMTGELIATRDQVETLLALGGTRWEAARN
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
AARAAVRAGMTPIINQMSVVGVVSLPGMMTGQVLAGQSPLEAVRYQIVIMFLLAASSGLG
HHHHHHHHCCHHHHHHHHHHHHHHCCCHHHCHHHCCCCHHHHHHHHHHHHHHHHHCCCHH
TVAAVLLAYRRLFSREHQLLSARIVQRAPGVH
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
STPAPEQMLSAWQVGIAALLILVNGALSIGLGLGLERRLAWAAVRTVVQLLLIGFVLQW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VFASAHWAVVLAVIALMTLIAGHATGSRGARDYAGLRLDGTLSVFGSTWLIGAIGLVAVL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCEEECCHHHHHHHHHHHHHHHHHHHH
QARPWYTPQYAIPIMGMILGNTLTGVGLALERMTGELIATRDQVETLLALGGTRWEAARN
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
AARAAVRAGMTPIINQMSVVGVVSLPGMMTGQVLAGQSPLEAVRYQIVIMFLLAASSGLG
HHHHHHHHCCHHHHHHHHHHHHHHCCCHHHCHHHCCCCHHHHHHHHHHHHHHHHHCCCHH
TVAAVLLAYRRLFSREHQLLSARIVQRAPGVH
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]