| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is tolQ [H]
Identifier: 17545451
GI number: 17545451
Start: 779411
End: 780103
Strand: Direct
Name: tolQ [H]
Synonym: RSc0732
Alternate gene names: 17545451
Gene position: 779411-780103 (Clockwise)
Preceding gene: 17545450
Following gene: 17545452
Centisome position: 20.97
GC content: 65.22
Gene sequence:
>693_bases ATGAATCCTGTCGAGGTCACGCAAGATCTGTCGATCGTCTCGCTGGTGCTGCACGCCAGCCTCCTGGTCCAATTCGTCAT GGGCCTCCTGCTGGTGATGTCGCTGTTCTCCTGGACGTACATCTTCCGCAAAGCCTTTGCGCTGCGCGCGGCCCGCGCGC AGACCGAATCCTTCGAGCGCGATTTCTGGGCGGGCGGCGACCTGCAGGCGATGTACCAGAGCGCCGCCAACAATCGCCAC CACACCGGCGCGCTCGAGCGCATCTTCGAAGCCGGCATGCGCGAATACCTGAAGACGCGCGAGCAGCAGCGCGGCGTCGG TGATCCGAGCGCCATCCTGGATGCCGCGCGCCGCGCCATGCGTGCCGCCTACCAGCGCGAGATGGATTCGCTCGAATCGC ACCTGCCGTTCCTGGCCTCGGTCGGCTCGGTCAGTCCGTATATCGGTCTGTTCGGTACGGTGTGGGGCATCATGAACGCG TTCCGTGGCCTGTCCAACGTGCAGCAGGCGACGCTGTCGGCGGTGGCGCCGGGCATTGCCGAAGCGCTGGTCGCCACGGC CATCGGCCTGTTCGCGGCCATTCCGGCGGTGATCGCCTACAACCGCTACGCCACCGAGATGGACCGCCTGGCCAACCGCT TCGAAAGCTTCATGGAAGAGTTCTCGAACATCCTGCAGCGCCAGACGCGCTAA
Upstream 100 bases:
>100_bases TGCTCGTCTCAGGCACGATTCGTGTTGGATGTGTCGACCGGCTCACATTCCGGCCGACCCCGATTCCCGCTCCCATACTC GCAACCATCAAAGCCGCCGC
Downstream 100 bases:
>100_bases GGACGGACCGCCATGGCTACCATCCAGCGAACGCGCCGCGCCCGACGGGCCAAGGCCGACATCAACGTGGTGCCCTACAT CGACGTGATGCTGGTGCTGC
Product: TOLQ-like transport transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MNPVEVTQDLSIVSLVLHASLLVQFVMGLLLVMSLFSWTYIFRKAFALRAARAQTESFERDFWAGGDLQAMYQSAANNRH HTGALERIFEAGMREYLKTREQQRGVGDPSAILDAARRAMRAAYQREMDSLESHLPFLASVGSVSPYIGLFGTVWGIMNA FRGLSNVQQATLSAVAPGIAEALVATAIGLFAAIPAVIAYNRYATEMDRLANRFESFMEEFSNILQRQTR
Sequences:
>Translated_230_residues MNPVEVTQDLSIVSLVLHASLLVQFVMGLLLVMSLFSWTYIFRKAFALRAARAQTESFERDFWAGGDLQAMYQSAANNRH HTGALERIFEAGMREYLKTREQQRGVGDPSAILDAARRAMRAAYQREMDSLESHLPFLASVGSVSPYIGLFGTVWGIMNA FRGLSNVQQATLSAVAPGIAEALVATAIGLFAAIPAVIAYNRYATEMDRLANRFESFMEEFSNILQRQTR >Mature_230_residues MNPVEVTQDLSIVSLVLHASLLVQFVMGLLLVMSLFSWTYIFRKAFALRAARAQTESFERDFWAGGDLQAMYQSAANNRH HTGALERIFEAGMREYLKTREQQRGVGDPSAILDAARRAMRAAYQREMDSLESHLPFLASVGSVSPYIGLFGTVWGIMNA FRGLSNVQQATLSAVAPGIAEALVATAIGLFAAIPAVIAYNRYATEMDRLANRFESFMEEFSNILQRQTR
Specific function: Involved in the tonB-independent uptake of proteins [H]
COG id: COG0811
COG function: function code U; Biopolymer transport proteins
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the exbB/tolQ family [H]
Homologues:
Organism=Escherichia coli, GI1786958, Length=220, Percent_Identity=50, Blast_Score=210, Evalue=5e-56, Organism=Escherichia coli, GI1789381, Length=210, Percent_Identity=36.6666666666667, Blast_Score=112, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002898 - InterPro: IPR014163 [H]
Pfam domain/function: PF01618 MotA_ExbB [H]
EC number: NA
Molecular weight: Translated: 25594; Mature: 25594
Theoretical pI: Translated: 7.82; Mature: 7.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPVEVTQDLSIVSLVLHASLLVQFVMGLLLVMSLFSWTYIFRKAFALRAARAQTESFER CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DFWAGGDLQAMYQSAANNRHHTGALERIFEAGMREYLKTREQQRGVGDPSAILDAARRAM HHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH RAAYQREMDSLESHLPFLASVGSVSPYIGLFGTVWGIMNAFRGLSNVQQATLSAVAPGIA HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EALVATAIGLFAAIPAVIAYNRYATEMDRLANRFESFMEEFSNILQRQTR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNPVEVTQDLSIVSLVLHASLLVQFVMGLLLVMSLFSWTYIFRKAFALRAARAQTESFER CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DFWAGGDLQAMYQSAANNRHHTGALERIFEAGMREYLKTREQQRGVGDPSAILDAARRAM HHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH RAAYQREMDSLESHLPFLASVGSVSPYIGLFGTVWGIMNAFRGLSNVQQATLSAVAPGIA HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EALVATAIGLFAAIPAVIAYNRYATEMDRLANRFESFMEEFSNILQRQTR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8955385; 10984043 [H]