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The map label for this gene is 17545435

Identifier: 17545435

GI number: 17545435

Start: 763653

End: 764213

Strand: Reverse

Name: 17545435

Synonym: RSc0716

Alternate gene names: NA

Gene position: 764213-763653 (Counterclockwise)

Preceding gene: 17545436

Following gene: 17545434

Centisome position: 20.56

GC content: 68.27

Gene sequence:

>561_bases
ATGACACGCGTTGCCTGGCAAGCCGGCGTGACGCTGGCGGAACTGACGATGGTGCTCGCGATCCTGGCAATCCTCGCGGT
ATTTGCCATGCCGGCCGGGCTGGACTGGTGGCGGCGCGAAACAGTGATCGTATTGGCCGATCGCTTCGCCAGCGCGGCAT
CGCTGGCACGGGCCACGGCGCGCAACCGGCGCATCTGGGTTCATCTGGGGCCGCGCGAGGCCGCGTCGGGCTGGTCAGCC
GGATGGGCGCTATACACGACCGCCTCGCCTCGGACGTGGGCCGCGCGCACCGCACCGGACACGGACGACGTGCTGATCGC
CGTGTCCCCGCCCGTTGTGCCATCGGTCGATTTTGCGTTCATCTCCTCGCAAAAGGGCGTCGACACCATTTCCTACGCAC
CTGTGGGATACTCACGGACAAGCAACGGCGCGCCGCTGTCCGGCACGCTGACCATCGCATCCGGAGCGCATGTGCGCCGC
GTGCGCATCAACTTCGCCGGCCGGGTGCGCGTGTGCAACCCGGCCACCGACCGCAGCTGCGGTACCGGCGACGATTCCTG
A

Upstream 100 bases:

>100_bases
GGCCCGACGCGGATTGCGGCACGCTGATCCTGCGCAGCACCGGGGAACGCTTCGCCGAGATCGCAGGCGCACGGCGATGG
GCCCCTGCATCCTGCTGGCC

Downstream 100 bases:

>100_bases
ACCCCTTCTTCCTGTCCGCGTTGCACCCATGTTTTCCGACTTCGATCACGCCATGATGCAGCGCGCCCTGGCGCTGGCGG
AAAACGGGCTCTTCACCACC

Product: type 4 fimbrial pilin related transmembrane protein

Products: NA

Alternate protein names: Type IV Pilus Assembly Protein Fimt; Type IV Pilus Assembly Protein FimT

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MTRVAWQAGVTLAELTMVLAILAILAVFAMPAGLDWWRRETVIVLADRFASAASLARATARNRRIWVHLGPREAASGWSA
GWALYTTASPRTWAARTAPDTDDVLIAVSPPVVPSVDFAFISSQKGVDTISYAPVGYSRTSNGAPLSGTLTIASGAHVRR
VRINFAGRVRVCNPATDRSCGTGDDS

Sequences:

>Translated_186_residues
MTRVAWQAGVTLAELTMVLAILAILAVFAMPAGLDWWRRETVIVLADRFASAASLARATARNRRIWVHLGPREAASGWSA
GWALYTTASPRTWAARTAPDTDDVLIAVSPPVVPSVDFAFISSQKGVDTISYAPVGYSRTSNGAPLSGTLTIASGAHVRR
VRINFAGRVRVCNPATDRSCGTGDDS
>Mature_185_residues
TRVAWQAGVTLAELTMVLAILAILAVFAMPAGLDWWRRETVIVLADRFASAASLARATARNRRIWVHLGPREAASGWSAG
WALYTTASPRTWAARTAPDTDDVLIAVSPPVVPSVDFAFISSQKGVDTISYAPVGYSRTSNGAPLSGTLTIASGAHVRRV
RINFAGRVRVCNPATDRSCGTGDDS

Specific function: Unknown

COG id: COG4970

COG function: function code NU; Tfp pilus assembly protein FimT

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19813; Mature: 19682

Theoretical pI: Translated: 10.66; Mature: 10.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRVAWQAGVTLAELTMVLAILAILAVFAMPAGLDWWRRETVIVLADRFASAASLARATA
CCEECHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECHHHHHHHHHHHHH
RNRRIWVHLGPREAASGWSAGWALYTTASPRTWAARTAPDTDDVLIAVSPPVVPSVDFAF
CCCEEEEEECCHHHCCCCCCCEEEEEECCCCCEEECCCCCCCCEEEEECCCCCCCCCEEE
ISSQKGVDTISYAPVGYSRTSNGAPLSGTLTIASGAHVRRVRINFAGRVRVCNPATDRSC
ECCCCCCCEEEECCCCCCCCCCCCCCEEEEEEECCCEEEEEEEEECCEEEEECCCCCCCC
GTGDDS
CCCCCC
>Mature Secondary Structure 
TRVAWQAGVTLAELTMVLAILAILAVFAMPAGLDWWRRETVIVLADRFASAASLARATA
CEECHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECHHHHHHHHHHHHH
RNRRIWVHLGPREAASGWSAGWALYTTASPRTWAARTAPDTDDVLIAVSPPVVPSVDFAF
CCCEEEEEECCHHHCCCCCCCEEEEEECCCCCEEECCCCCCCCEEEEECCCCCCCCCEEE
ISSQKGVDTISYAPVGYSRTSNGAPLSGTLTIASGAHVRRVRINFAGRVRVCNPATDRSC
ECCCCCCCEEEECCCCCCCCCCCCCCEEEEEEECCCEEEEEEEEECCEEEEECCCCCCCC
GTGDDS
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA