| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17545424
Identifier: 17545424
GI number: 17545424
Start: 752479
End: 753051
Strand: Reverse
Name: 17545424
Synonym: RSc0705
Alternate gene names: NA
Gene position: 753051-752479 (Counterclockwise)
Preceding gene: 17545425
Following gene: 17545423
Centisome position: 20.26
GC content: 67.71
Gene sequence:
>573_bases ATGGCAGAAGAGTTTGAAGTGCGCGGCGTCCACGAACACGTGCTGGACCATGCCGCCGAACACGGAGGCCCCGACAGCTT CGCCGGCCGCATCGCCGTGATGACGGCCATCCTGTCCACCGCCGGCGCCATCTTCGGCTACCAGGGCGGCGCGACCCAGA ACGAAGCGCTGCTGCTGAAGAACGAGGCGGCCATCCACAAGACAGAGGCCTCCAACCAGTGGGCCTACTACCAGGCCAAG TCGCAGAAGCAGGCGATCGCCGAGCTGGCCGGGCAATTGCCGGGCGTCGATCACGAGGCGGCCAAGCGCGAAGCGCAACG CTACGGCACCGAGAAAGAACAGATCCGCCAGACCGCGGAAACCCATGAGCGCGCCGCCGGCGAGGCCGACAAGGCGAGCG AGGTGGCGGTGCACCACCACCACCGCTGGGCGCAGGCCCTGGTGGCCATCCAGGTCTCCATCGCGCTGGCGGCTATCACG CTGCTGACGCGGCGTCGGTGGCTGCTGGGGTTCTCCTACGGGATCGGTGCGCTGGGTGGGATGCTGGCGGTGATGGCGTT GCTGCATCTCTGA
Upstream 100 bases:
>100_bases GCTGCCGCTGGCAAAAAGCAAATTCGCCAAAGCCCTGCCGGGGTACAACGGCAAGTAACGACAACACACGACTGACACGA CAGAGGGAGCAAGCCGAAAC
Downstream 100 bases:
>100_bases ACGGCATGGCATCGGCGGAGGCGGATGTACCGTCTGCCTGCTGCCAGTCGGAACCACGATGTCACAGCCTTTCACCATAG CCGCCGCCCAATCCGTTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: Tranmembrane Protein
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MAEEFEVRGVHEHVLDHAAEHGGPDSFAGRIAVMTAILSTAGAIFGYQGGATQNEALLLKNEAAIHKTEASNQWAYYQAK SQKQAIAELAGQLPGVDHEAAKREAQRYGTEKEQIRQTAETHERAAGEADKASEVAVHHHHRWAQALVAIQVSIALAAIT LLTRRRWLLGFSYGIGALGGMLAVMALLHL
Sequences:
>Translated_190_residues MAEEFEVRGVHEHVLDHAAEHGGPDSFAGRIAVMTAILSTAGAIFGYQGGATQNEALLLKNEAAIHKTEASNQWAYYQAK SQKQAIAELAGQLPGVDHEAAKREAQRYGTEKEQIRQTAETHERAAGEADKASEVAVHHHHRWAQALVAIQVSIALAAIT LLTRRRWLLGFSYGIGALGGMLAVMALLHL >Mature_189_residues AEEFEVRGVHEHVLDHAAEHGGPDSFAGRIAVMTAILSTAGAIFGYQGGATQNEALLLKNEAAIHKTEASNQWAYYQAKS QKQAIAELAGQLPGVDHEAAKREAQRYGTEKEQIRQTAETHERAAGEADKASEVAVHHHHRWAQALVAIQVSIALAAITL LTRRRWLLGFSYGIGALGGMLAVMALLHL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20548; Mature: 20417
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEEFEVRGVHEHVLDHAAEHGGPDSFAGRIAVMTAILSTAGAIFGYQGGATQNEALLLK CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE NEAAIHKTEASNQWAYYQAKSQKQAIAELAGQLPGVDHEAAKREAQRYGTEKEQIRQTAE CCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHH THERAAGEADKASEVAVHHHHRWAQALVAIQVSIALAAITLLTRRRWLLGFSYGIGALGG HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLAVMALLHL HHHHHHHHHC >Mature Secondary Structure AEEFEVRGVHEHVLDHAAEHGGPDSFAGRIAVMTAILSTAGAIFGYQGGATQNEALLLK CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE NEAAIHKTEASNQWAYYQAKSQKQAIAELAGQLPGVDHEAAKREAQRYGTEKEQIRQTAE CCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHH THERAAGEADKASEVAVHHHHRWAQALVAIQVSIALAAITLLTRRRWLLGFSYGIGALGG HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLAVMALLHL HHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA