| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is pilG [H]
Identifier: 17545387
GI number: 17545387
Start: 712924
End: 713463
Strand: Direct
Name: pilG [H]
Synonym: RSc0668
Alternate gene names: 17545387
Gene position: 712924-713463 (Clockwise)
Preceding gene: 17545386
Following gene: 17545388
Centisome position: 19.18
GC content: 63.89
Gene sequence:
>540_bases GTGGCCGTCGGGCCCACGCTGCGTGGCGATTTGCCGCGTTCCATCCGGTCGGAATGTCGTGGCGACCCGTCCGTGGTCGC GCAACGCGAGAACATGATGCAATCCGCGCGGGTGGAACAACTGACCAATTCCCAACCGCTGGCGAGTTCGCTTGCCGGCC GTAAAGTGCTGGTGATCGACGATTCCAGTACCATCCGCCGTACCGCGCAGATTTTCCTGTCCAAGGTCGATTGCCAGGTC GTGCTGGCCGAAGACGGGTTCGATGCGCTGGCCAAGCTGGGTGACTTCAAGCCGGACATCGTCTTTTGCGACATCCTGAT GCCCAAGCTGGACGGTTACCTGACCTGCTCACTGATCAAGAAAAGCCCGAAGTTTCATGCCACGCCCGTGGTCATGCTGT CGTCGCGCGACGGGGTGTTCGACCGCGCGCGCGGCAAGCTGGTCGGGGCGGTGGACCACCTTGCCAAGCCTTTCTCGCGG GAAGCGCTGCTGGAGGCGGTCCAGGCGCATCTGCCGGCAGCCGCTGGCGCCGCGCAATGA
Upstream 100 bases:
>100_bases CCATTGACGGCGAATAGGTGACTTGTCACACTTCGACCCATTCTGAGCTTCACAACTTCATAAGCGGGCCGGGGGGCGTA GTTTTGAAGTCGTTGCCAGC
Downstream 100 bases:
>100_bases CGGCACCTCTTTAGAAAGAAGGACTGTTTGTATGGCAATCAAAAAGATTCTGGTGGTTGATGACTCCCCCACCGAAGCAC TGTTCCTGTCGGAAATCCTG
Product: twitching motility two-component response regulator transcription regulator protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MAVGPTLRGDLPRSIRSECRGDPSVVAQRENMMQSARVEQLTNSQPLASSLAGRKVLVIDDSSTIRRTAQIFLSKVDCQV VLAEDGFDALAKLGDFKPDIVFCDILMPKLDGYLTCSLIKKSPKFHATPVVMLSSRDGVFDRARGKLVGAVDHLAKPFSR EALLEAVQAHLPAAAGAAQ
Sequences:
>Translated_179_residues MAVGPTLRGDLPRSIRSECRGDPSVVAQRENMMQSARVEQLTNSQPLASSLAGRKVLVIDDSSTIRRTAQIFLSKVDCQV VLAEDGFDALAKLGDFKPDIVFCDILMPKLDGYLTCSLIKKSPKFHATPVVMLSSRDGVFDRARGKLVGAVDHLAKPFSR EALLEAVQAHLPAAAGAAQ >Mature_178_residues AVGPTLRGDLPRSIRSECRGDPSVVAQRENMMQSARVEQLTNSQPLASSLAGRKVLVIDDSSTIRRTAQIFLSKVDCQVV LAEDGFDALAKLGDFKPDIVFCDILMPKLDGYLTCSLIKKSPKFHATPVVMLSSRDGVFDRARGKLVGAVDHLAKPFSRE ALLEAVQAHLPAAAGAAQ
Specific function: Is involved in pilus biosynthesis and twitching motility. May act as a single-domain response regulator whose function may be to receive a certain environmental signal(s) and then transduce that signal to the pilus assembly machinery via specific protein-
COG id: COG0784
COG function: function code T; FOG: CheY-like receiver
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1787487, Length=111, Percent_Identity=33.3333333333333, Blast_Score=73, Evalue=1e-14, Organism=Escherichia coli, GI1786599, Length=116, Percent_Identity=33.6206896551724, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI87082012, Length=119, Percent_Identity=34.453781512605, Blast_Score=62, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 19289; Mature: 19157
Theoretical pI: Translated: 8.66; Mature: 8.66
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVGPTLRGDLPRSIRSECRGDPSVVAQRENMMQSARVEQLTNSQPLASSLAGRKVLVID CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCEEEEEE DSSTIRRTAQIFLSKVDCQVVLAEDGFDALAKLGDFKPDIVFCDILMPKLDGYLTCSLIK CCHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHCCCCCCEEEEEHHHHHCCCEEEEEEHH KSPKFHATPVVMLSSRDGVFDRARGKLVGAVDHLAKPFSREALLEAVQAHLPAAAGAAQ CCCCCCCCEEEEEECCCCCHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure AVGPTLRGDLPRSIRSECRGDPSVVAQRENMMQSARVEQLTNSQPLASSLAGRKVLVID CCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCEEEEEE DSSTIRRTAQIFLSKVDCQVVLAEDGFDALAKLGDFKPDIVFCDILMPKLDGYLTCSLIK CCHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHCCCCCCEEEEEHHHHHCCCEEEEEEHH KSPKFHATPVVMLSSRDGVFDRARGKLVGAVDHLAKPFSREALLEAVQAHLPAAAGAAQ CCCCCCCCEEEEEECCCCCHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8104179; 10984043 [H]