| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is dbpA [H]
Identifier: 17545341
GI number: 17545341
Start: 668879
End: 670276
Strand: Reverse
Name: dbpA [H]
Synonym: RSc0622
Alternate gene names: 17545341
Gene position: 670276-668879 (Counterclockwise)
Preceding gene: 17545342
Following gene: 17545336
Centisome position: 18.04
GC content: 66.24
Gene sequence:
>1398_bases ATGACCATCGAACCGACTGCCCCACCCTTCAGTACCCTTGCGCTCGCCCCCGCCGTACTCGCGAATCTCGCGCAGCTTGG TTACACCGACATGACGCCGATCCAAGCCGCGAGCCTGCCGATCGCGCTCGCGGGTCACGACCTGATCGCGCAGGCGAAGA CCGGCAGCGGCAAAACCGCAGCGTTCTCGCTCGCGCTGCTCGCGCGGCTCGACACGCGCCGCTTCGACGTGCAGGCGATG GTGCTCTGCCCGACGCGCGAGCTTGCCGATCAGGTCGCGCAGGAAATCCGCCGCCTCGCGCGCGCCGAGGAAAACGTGAA AGTGCTGACGCTCTGCGGCGGCACGCCAATGCGTCCGCAGGCGGCAAGCCTCGAGCACGGCGCGCATGTCGTCGTCGGTA CGCCGGGGCGCATCATGGACCATCTCGAACGCGGCAATCTCGCGCTCGGCGCGCTGAAGACGCTCGTGCTCGACGAAGCG GACCGGATGCTCGACATGGGGTTCTTCGACGACATCGCGACGGTCGTGCGCCAGTGTCCGCCTGAACGGCAGACGCTGCT GTTCTCGGCGACCTACCCAGACGGGATCGCAAAGCTGAGCCGGCAGATCCTGCGGAATCCGAAGGAGGTGAAACTCGAAG AGCGCCACGACGACAGCAAGATTCGCCAGCGCTTCTACGAGGTGACCGATGACGAGCGACTGCATGCGGTCGGGCTGCTG CTGAAGCACTATCGGCCGGTCAGCACACTCGCGTTCTGCAACACGAAGCAGCAATGCCGCAACCTGCTCGACGTGCTGCG TGCGCAAGGCTTCCATGCGCTCGCGCTGCATGGCGAGCTCGAGCAGCGCGAGCGCGATCAGGTATTGATCCAGTTTGCGA ACCGGAGCTGCTCGGTGCTCGTCGCAACCGACGTTGCCGCACGCGGGCTCGACATCGCGCAGCTCGAAGCAGTGATCAAC GTTGATGTGACGCCCGATCCCGAAGTGCACGTGCATCGGATCGGCCGCACGGGCCGTGCCGATCAGGACGGTTGGGCGCT GAGCCTCGCGAGCATGGACGAGATGGGGCGTGTCGGCGGCATCGAGCAGGCGCTCGGGCGCGAGGTCGAATGGCATCGGC TCGCCGAACTCGACGCCAGCAGCGACGCACCGCTGCTACCGCCGATGGAGACGCTACAGATTCTCGGCGGACGCAAGGAC AAGATCCGCCCCGGCGATGTGCTCGGCGCGCTGACCGGCGACGCGGGCTTTCGCGGCGACCAGATCGGCAAGATCAACGC GACCGAATTCTCGACCTACGTCGCGGTCGAGCGCGGCATCGCGCGCGACGCGCTGCGCAAGCTCAACGCAGGCAAGGTGA AGGGCAAGAAGGTCAGGGTTCGGTTGATGGACGAATGA
Upstream 100 bases:
>100_bases GCGGCGCGCGCAACTATGTCGAGCGCTTCGAAGCCGACGACGGCACAGTCGTCTACGAGCAACTCGAAGGCAGGCCGCTC CAGTGACCCAACACAACGAC
Downstream 100 bases:
>100_bases CGCCGGCGCCGCCCTCGGGCGGCCTCTTCAACGACAGTCTCCCCTCTGCATCCGGCGCTGCACCGCTTGGCGATGGCACT GCTGCCGATTGTTACGGGGG
Product: ATP-dependent RNA helicase DbpA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 465; Mature: 464
Protein sequence:
>465_residues MTIEPTAPPFSTLALAPAVLANLAQLGYTDMTPIQAASLPIALAGHDLIAQAKTGSGKTAAFSLALLARLDTRRFDVQAM VLCPTRELADQVAQEIRRLARAEENVKVLTLCGGTPMRPQAASLEHGAHVVVGTPGRIMDHLERGNLALGALKTLVLDEA DRMLDMGFFDDIATVVRQCPPERQTLLFSATYPDGIAKLSRQILRNPKEVKLEERHDDSKIRQRFYEVTDDERLHAVGLL LKHYRPVSTLAFCNTKQQCRNLLDVLRAQGFHALALHGELEQRERDQVLIQFANRSCSVLVATDVAARGLDIAQLEAVIN VDVTPDPEVHVHRIGRTGRADQDGWALSLASMDEMGRVGGIEQALGREVEWHRLAELDASSDAPLLPPMETLQILGGRKD KIRPGDVLGALTGDAGFRGDQIGKINATEFSTYVAVERGIARDALRKLNAGKVKGKKVRVRLMDE
Sequences:
>Translated_465_residues MTIEPTAPPFSTLALAPAVLANLAQLGYTDMTPIQAASLPIALAGHDLIAQAKTGSGKTAAFSLALLARLDTRRFDVQAM VLCPTRELADQVAQEIRRLARAEENVKVLTLCGGTPMRPQAASLEHGAHVVVGTPGRIMDHLERGNLALGALKTLVLDEA DRMLDMGFFDDIATVVRQCPPERQTLLFSATYPDGIAKLSRQILRNPKEVKLEERHDDSKIRQRFYEVTDDERLHAVGLL LKHYRPVSTLAFCNTKQQCRNLLDVLRAQGFHALALHGELEQRERDQVLIQFANRSCSVLVATDVAARGLDIAQLEAVIN VDVTPDPEVHVHRIGRTGRADQDGWALSLASMDEMGRVGGIEQALGREVEWHRLAELDASSDAPLLPPMETLQILGGRKD KIRPGDVLGALTGDAGFRGDQIGKINATEFSTYVAVERGIARDALRKLNAGKVKGKKVRVRLMDE >Mature_464_residues TIEPTAPPFSTLALAPAVLANLAQLGYTDMTPIQAASLPIALAGHDLIAQAKTGSGKTAAFSLALLARLDTRRFDVQAMV LCPTRELADQVAQEIRRLARAEENVKVLTLCGGTPMRPQAASLEHGAHVVVGTPGRIMDHLERGNLALGALKTLVLDEAD RMLDMGFFDDIATVVRQCPPERQTLLFSATYPDGIAKLSRQILRNPKEVKLEERHDDSKIRQRFYEVTDDERLHAVGLLL KHYRPVSTLAFCNTKQQCRNLLDVLRAQGFHALALHGELEQRERDQVLIQFANRSCSVLVATDVAARGLDIAQLEAVINV DVTPDPEVHVHRIGRTGRADQDGWALSLASMDEMGRVGGIEQALGREVEWHRLAELDASSDAPLLPPMETLQILGGRKDK IRPGDVLGALTGDAGFRGDQIGKINATEFSTYVAVERGIARDALRKLNAGKVKGKKVRVRLMDE
Specific function: Has a helix-destabilizing activity, which is not coupled to the ATPase activity. Can unwind the 23S rRNA as well as 16S rRNA. Exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA. Could play a major role in ribosome ass
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI164664518, Length=361, Percent_Identity=34.9030470914127, Blast_Score=248, Evalue=6e-66, Organism=Homo sapiens, GI45446747, Length=366, Percent_Identity=38.7978142076503, Blast_Score=236, Evalue=3e-62, Organism=Homo sapiens, GI45446743, Length=366, Percent_Identity=38.7978142076503, Blast_Score=236, Evalue=3e-62, Organism=Homo sapiens, GI7661920, Length=368, Percent_Identity=34.5108695652174, Blast_Score=229, Evalue=5e-60, Organism=Homo sapiens, GI4758138, Length=359, Percent_Identity=36.7688022284123, Blast_Score=226, Evalue=5e-59, Organism=Homo sapiens, GI20149629, Length=368, Percent_Identity=34.5108695652174, Blast_Score=222, Evalue=5e-58, Organism=Homo sapiens, GI169881239, Length=375, Percent_Identity=38.4, Blast_Score=221, Evalue=1e-57, Organism=Homo sapiens, GI13514809, Length=375, Percent_Identity=38.4, Blast_Score=221, Evalue=1e-57, Organism=Homo sapiens, GI301171475, Length=369, Percent_Identity=38.7533875338753, Blast_Score=221, Evalue=2e-57, Organism=Homo sapiens, GI301171467, Length=369, Percent_Identity=38.7533875338753, Blast_Score=220, Evalue=2e-57, Organism=Homo sapiens, GI87196351, Length=369, Percent_Identity=38.7533875338753, Blast_Score=220, Evalue=2e-57, Organism=Homo sapiens, GI31542656, Length=378, Percent_Identity=35.978835978836, Blast_Score=220, Evalue=2e-57, Organism=Homo sapiens, GI41327773, Length=363, Percent_Identity=37.1900826446281, Blast_Score=220, Evalue=2e-57, Organism=Homo sapiens, GI262231852, Length=367, Percent_Identity=37.0572207084469, Blast_Score=220, Evalue=2e-57, Organism=Homo sapiens, GI262118318, Length=367, Percent_Identity=37.0572207084469, Blast_Score=220, Evalue=2e-57, Organism=Homo sapiens, GI216548263, Length=367, Percent_Identity=37.0572207084469, Blast_Score=219, Evalue=3e-57, Organism=Homo sapiens, GI13518015, Length=367, Percent_Identity=37.0572207084469, Blast_Score=219, Evalue=3e-57, Organism=Homo sapiens, GI148613856, Length=332, Percent_Identity=38.2530120481928, Blast_Score=219, Evalue=3e-57, Organism=Homo sapiens, GI38201710, Length=332, Percent_Identity=38.2530120481928, Blast_Score=219, Evalue=3e-57, Organism=Homo sapiens, GI224593278, Length=353, Percent_Identity=37.3937677053824, Blast_Score=209, Evalue=5e-54, Organism=Homo sapiens, GI50659095, Length=383, Percent_Identity=34.2036553524804, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI41327771, Length=397, Percent_Identity=32.4937027707809, Blast_Score=203, Evalue=3e-52, Organism=Homo sapiens, GI21071032, Length=362, Percent_Identity=35.6353591160221, Blast_Score=199, Evalue=6e-51, Organism=Homo sapiens, GI188035877, Length=354, Percent_Identity=32.7683615819209, Blast_Score=198, Evalue=1e-50, Organism=Homo sapiens, GI13129006, Length=387, Percent_Identity=33.5917312661499, Blast_Score=197, Evalue=1e-50, Organism=Homo sapiens, GI4758112, Length=349, Percent_Identity=32.378223495702, Blast_Score=195, Evalue=6e-50, Organism=Homo sapiens, GI18375623, Length=349, Percent_Identity=32.378223495702, Blast_Score=195, Evalue=6e-50, Organism=Homo sapiens, GI21040371, Length=349, Percent_Identity=32.6647564469914, Blast_Score=195, Evalue=8e-50, Organism=Homo sapiens, GI51094101, Length=370, Percent_Identity=33.7837837837838, Blast_Score=193, Evalue=3e-49, Organism=Homo sapiens, GI164419743, Length=370, Percent_Identity=33.7837837837838, Blast_Score=192, Evalue=4e-49, Organism=Homo sapiens, GI83700235, Length=328, Percent_Identity=35.0609756097561, Blast_Score=190, Evalue=2e-48, Organism=Homo sapiens, GI256223453, Length=341, Percent_Identity=32.8445747800587, Blast_Score=189, Evalue=4e-48, Organism=Homo sapiens, GI4503529, Length=327, Percent_Identity=33.6391437308869, Blast_Score=187, Evalue=1e-47, Organism=Homo sapiens, GI13514831, Length=349, Percent_Identity=34.9570200573066, Blast_Score=187, Evalue=3e-47, Organism=Homo sapiens, GI38327634, Length=375, Percent_Identity=30.9333333333333, Blast_Score=185, Evalue=6e-47, Organism=Homo sapiens, GI41327776, Length=367, Percent_Identity=31.6076294277929, Blast_Score=184, Evalue=1e-46, Organism=Homo sapiens, GI222352149, Length=360, Percent_Identity=32.5, Blast_Score=183, Evalue=3e-46, Organism=Homo sapiens, GI41327779, Length=364, Percent_Identity=32.967032967033, Blast_Score=182, Evalue=6e-46, Organism=Homo sapiens, GI8922886, Length=386, Percent_Identity=31.3471502590674, Blast_Score=179, Evalue=5e-45, Organism=Homo sapiens, GI6005743, Length=386, Percent_Identity=31.0880829015544, Blast_Score=177, Evalue=1e-44, Organism=Homo sapiens, GI164419732, Length=394, Percent_Identity=30.4568527918782, Blast_Score=177, Evalue=2e-44, Organism=Homo sapiens, GI9506931, Length=399, Percent_Identity=32.5814536340852, Blast_Score=176, Evalue=4e-44, Organism=Homo sapiens, GI55749865, Length=373, Percent_Identity=29.2225201072386, Blast_Score=174, Evalue=2e-43, Organism=Homo sapiens, GI62241022, Length=359, Percent_Identity=31.4763231197772, Blast_Score=170, Evalue=3e-42, Organism=Homo sapiens, GI62241024, Length=337, Percent_Identity=31.4540059347181, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI4826686, Length=336, Percent_Identity=32.1428571428571, Blast_Score=143, Evalue=3e-34, Organism=Homo sapiens, GI38569503, Length=347, Percent_Identity=27.6657060518732, Blast_Score=139, Evalue=8e-33, Organism=Homo sapiens, GI38569505, Length=347, Percent_Identity=27.6657060518732, Blast_Score=138, Evalue=9e-33, Organism=Homo sapiens, GI9966805, Length=341, Percent_Identity=31.6715542521994, Blast_Score=135, Evalue=7e-32, Organism=Homo sapiens, GI17505907, Length=224, Percent_Identity=33.4821428571429, Blast_Score=122, Evalue=8e-28, Organism=Homo sapiens, GI20336298, Length=224, Percent_Identity=33.4821428571429, Blast_Score=121, Evalue=2e-27, Organism=Homo sapiens, GI256773275, Length=369, Percent_Identity=29.5392953929539, Blast_Score=120, Evalue=4e-27, Organism=Homo sapiens, GI154759257, Length=445, Percent_Identity=28.314606741573, Blast_Score=113, Evalue=3e-25, Organism=Escherichia coli, GI1787605, Length=455, Percent_Identity=53.6263736263736, Blast_Score=462, Evalue=1e-131, Organism=Escherichia coli, GI1787016, Length=367, Percent_Identity=40.8719346049046, Blast_Score=260, Evalue=1e-70, Organism=Escherichia coli, GI87082221, Length=357, Percent_Identity=40.6162464985994, Blast_Score=256, Evalue=2e-69, Organism=Escherichia coli, GI1790214, Length=374, Percent_Identity=36.096256684492, Blast_Score=228, Evalue=9e-61, Organism=Escherichia coli, GI1788930, Length=369, Percent_Identity=36.0433604336043, Blast_Score=186, Evalue=3e-48, Organism=Caenorhabditis elegans, GI71995724, Length=367, Percent_Identity=35.4223433242507, Blast_Score=235, Evalue=3e-62, Organism=Caenorhabditis elegans, GI17507121, Length=367, Percent_Identity=35.4223433242507, Blast_Score=235, Evalue=3e-62, Organism=Caenorhabditis elegans, GI71987143, Length=365, Percent_Identity=35.6164383561644, Blast_Score=232, Evalue=3e-61, Organism=Caenorhabditis elegans, GI17555296, Length=369, Percent_Identity=35.7723577235772, Blast_Score=224, Evalue=6e-59, Organism=Caenorhabditis elegans, GI17552114, Length=361, Percent_Identity=32.6869806094183, Blast_Score=222, Evalue=3e-58, Organism=Caenorhabditis elegans, GI17510309, Length=362, Percent_Identity=37.8453038674033, Blast_Score=218, Evalue=7e-57, Organism=Caenorhabditis elegans, GI17510307, Length=362, Percent_Identity=37.8453038674033, Blast_Score=218, Evalue=7e-57, Organism=Caenorhabditis elegans, GI115533224, Length=344, Percent_Identity=38.6627906976744, Blast_Score=218, Evalue=7e-57, Organism=Caenorhabditis elegans, GI71995514, Length=362, Percent_Identity=37.8453038674033, Blast_Score=218, Evalue=8e-57, Organism=Caenorhabditis elegans, GI17510559, Length=377, Percent_Identity=36.0742705570292, Blast_Score=213, Evalue=2e-55, Organism=Caenorhabditis elegans, GI17507879, Length=376, Percent_Identity=37.2340425531915, Blast_Score=208, Evalue=4e-54, Organism=Caenorhabditis elegans, GI17507877, Length=372, Percent_Identity=37.0967741935484, Blast_Score=208, Evalue=4e-54, Organism=Caenorhabditis elegans, GI17552642, Length=374, Percent_Identity=35.8288770053476, Blast_Score=207, Evalue=1e-53, Organism=Caenorhabditis elegans, GI115532546, Length=376, Percent_Identity=31.9148936170213, Blast_Score=202, Evalue=3e-52, Organism=Caenorhabditis elegans, GI115532548, Length=376, Percent_Identity=31.9148936170213, Blast_Score=202, Evalue=3e-52, Organism=Caenorhabditis elegans, GI86570094, Length=349, Percent_Identity=37.2492836676218, Blast_Score=200, Evalue=1e-51, Organism=Caenorhabditis elegans, GI32565321, Length=383, Percent_Identity=34.2036553524804, Blast_Score=199, Evalue=2e-51, Organism=Caenorhabditis elegans, GI71999646, Length=367, Percent_Identity=31.8801089918256, Blast_Score=199, Evalue=4e-51, Organism=Caenorhabditis elegans, GI71999644, Length=367, Percent_Identity=31.8801089918256, Blast_Score=197, Evalue=1e-50, Organism=Caenorhabditis elegans, GI71995718, Length=364, Percent_Identity=36.2637362637363, Blast_Score=195, Evalue=4e-50, Organism=Caenorhabditis elegans, GI71982858, Length=349, Percent_Identity=30.6590257879656, Blast_Score=189, Evalue=4e-48, Organism=Caenorhabditis elegans, GI17507945, Length=402, Percent_Identity=34.8258706467662, Blast_Score=188, Evalue=6e-48, Organism=Caenorhabditis elegans, GI17509811, Length=365, Percent_Identity=31.7808219178082, Blast_Score=187, Evalue=1e-47, Organism=Caenorhabditis elegans, GI17507881, Length=381, Percent_Identity=33.0708661417323, Blast_Score=187, Evalue=1e-47, Organism=Caenorhabditis elegans, GI17505370, Length=387, Percent_Identity=32.5581395348837, Blast_Score=185, Evalue=4e-47, Organism=Caenorhabditis elegans, GI17536099, Length=401, Percent_Identity=32.6683291770574, Blast_Score=184, Evalue=1e-46, Organism=Caenorhabditis elegans, GI17536101, Length=401, Percent_Identity=32.6683291770574, Blast_Score=183, Evalue=1e-46, Organism=Caenorhabditis elegans, GI17536103, Length=401, Percent_Identity=32.6683291770574, Blast_Score=181, Evalue=6e-46, Organism=Caenorhabditis elegans, GI193206561, Length=343, Percent_Identity=29.7376093294461, Blast_Score=181, Evalue=8e-46, Organism=Caenorhabditis elegans, GI17537549, Length=382, Percent_Identity=31.151832460733, Blast_Score=178, Evalue=5e-45, Organism=Caenorhabditis elegans, GI17553716, Length=362, Percent_Identity=28.4530386740331, Blast_Score=158, Evalue=6e-39, Organism=Caenorhabditis elegans, GI25148203, Length=435, Percent_Identity=25.9770114942529, Blast_Score=148, Evalue=6e-36, Organism=Caenorhabditis elegans, GI193208216, Length=385, Percent_Identity=29.0909090909091, Blast_Score=147, Evalue=2e-35, Organism=Caenorhabditis elegans, GI17507641, Length=383, Percent_Identity=30.2872062663185, Blast_Score=145, Evalue=5e-35, Organism=Caenorhabditis elegans, GI17556951, Length=364, Percent_Identity=28.2967032967033, Blast_Score=137, Evalue=1e-32, Organism=Caenorhabditis elegans, GI32564046, Length=370, Percent_Identity=30, Blast_Score=137, Evalue=1e-32, Organism=Caenorhabditis elegans, GI17508543, Length=374, Percent_Identity=27.807486631016, Blast_Score=137, Evalue=2e-32, Organism=Caenorhabditis elegans, GI71990816, Length=367, Percent_Identity=30.2452316076294, Blast_Score=135, Evalue=6e-32, Organism=Caenorhabditis elegans, GI71982862, Length=199, Percent_Identity=32.6633165829146, Blast_Score=125, Evalue=5e-29, Organism=Caenorhabditis elegans, GI25148291, Length=404, Percent_Identity=29.2079207920792, Blast_Score=119, Evalue=3e-27, Organism=Caenorhabditis elegans, GI25148205, Length=351, Percent_Identity=25.6410256410256, Blast_Score=111, Evalue=7e-25, Organism=Caenorhabditis elegans, GI71997889, Length=373, Percent_Identity=28.686327077748, Blast_Score=110, Evalue=2e-24, Organism=Caenorhabditis elegans, GI71987152, Length=100, Percent_Identity=36, Blast_Score=77, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6324217, Length=357, Percent_Identity=37.2549019607843, Blast_Score=231, Evalue=3e-61, Organism=Saccharomyces cerevisiae, GI6325138, Length=376, Percent_Identity=39.3617021276596, Blast_Score=229, Evalue=9e-61, Organism=Saccharomyces cerevisiae, GI6321856, Length=363, Percent_Identity=38.5674931129477, Blast_Score=228, Evalue=2e-60, Organism=Saccharomyces cerevisiae, GI6324778, Length=382, Percent_Identity=38.2198952879581, Blast_Score=224, Evalue=2e-59, Organism=Saccharomyces cerevisiae, GI6320041, Length=360, Percent_Identity=32.5, Blast_Score=219, Evalue=1e-57, Organism=Saccharomyces cerevisiae, GI6323021, Length=393, Percent_Identity=34.6055979643766, Blast_Score=217, Evalue=3e-57, Organism=Saccharomyces cerevisiae, GI6321360, Length=371, Percent_Identity=36.6576819407008, Blast_Score=213, Evalue=7e-56, Organism=Saccharomyces cerevisiae, GI6320224, Length=366, Percent_Identity=32.7868852459016, Blast_Score=208, Evalue=1e-54, Organism=Saccharomyces cerevisiae, GI6322912, Length=366, Percent_Identity=33.879781420765, Blast_Score=199, Evalue=6e-52, Organism=Saccharomyces cerevisiae, GI6322323, Length=366, Percent_Identity=33.879781420765, Blast_Score=199, Evalue=6e-52, Organism=Saccharomyces cerevisiae, GI6323947, Length=358, Percent_Identity=32.9608938547486, Blast_Score=192, Evalue=7e-50, Organism=Saccharomyces cerevisiae, GI6321963, Length=375, Percent_Identity=34.1333333333333, Blast_Score=190, Evalue=3e-49, Organism=Saccharomyces cerevisiae, GI6322427, Length=361, Percent_Identity=33.2409972299169, Blast_Score=187, Evalue=4e-48, Organism=Saccharomyces cerevisiae, GI6324620, Length=381, Percent_Identity=31.2335958005249, Blast_Score=186, Evalue=7e-48, Organism=Saccharomyces cerevisiae, GI6320119, Length=354, Percent_Identity=30.5084745762712, Blast_Score=184, Evalue=2e-47, Organism=Saccharomyces cerevisiae, GI6320449, Length=358, Percent_Identity=30.4469273743017, Blast_Score=174, Evalue=3e-44, Organism=Saccharomyces cerevisiae, GI6321111, Length=362, Percent_Identity=29.5580110497238, Blast_Score=172, Evalue=1e-43, Organism=Saccharomyces cerevisiae, GI6319714, Length=434, Percent_Identity=27.1889400921659, Blast_Score=169, Evalue=1e-42, Organism=Saccharomyces cerevisiae, GI6319618, Length=432, Percent_Identity=28.9351851851852, Blast_Score=162, Evalue=8e-41, Organism=Saccharomyces cerevisiae, GI6320400, Length=375, Percent_Identity=29.8666666666667, Blast_Score=157, Evalue=5e-39, Organism=Saccharomyces cerevisiae, GI6321267, Length=341, Percent_Identity=28.1524926686217, Blast_Score=138, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6320173, Length=207, Percent_Identity=37.1980676328502, Blast_Score=135, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6323306, Length=417, Percent_Identity=25.1798561151079, Blast_Score=129, Evalue=1e-30, Organism=Saccharomyces cerevisiae, GI6322876, Length=434, Percent_Identity=26.036866359447, Blast_Score=123, Evalue=7e-29, Organism=Saccharomyces cerevisiae, GI6324366, Length=419, Percent_Identity=24.8210023866348, Blast_Score=100, Evalue=4e-22, Organism=Saccharomyces cerevisiae, GI6321374, Length=408, Percent_Identity=21.5686274509804, Blast_Score=84, Evalue=7e-17, Organism=Drosophila melanogaster, GI18857967, Length=364, Percent_Identity=37.0879120879121, Blast_Score=230, Evalue=1e-60, Organism=Drosophila melanogaster, GI24645031, Length=367, Percent_Identity=35.149863760218, Blast_Score=229, Evalue=3e-60, Organism=Drosophila melanogaster, GI28574962, Length=361, Percent_Identity=39.0581717451524, Blast_Score=226, Evalue=2e-59, Organism=Drosophila melanogaster, GI24584399, Length=348, Percent_Identity=38.5057471264368, Blast_Score=226, Evalue=3e-59, Organism=Drosophila melanogaster, GI24662330, Length=354, Percent_Identity=37.2881355932203, Blast_Score=222, Evalue=4e-58, Organism=Drosophila melanogaster, GI24644483, Length=360, Percent_Identity=36.6666666666667, Blast_Score=218, Evalue=6e-57, Organism=Drosophila melanogaster, GI24644487, Length=360, Percent_Identity=36.6666666666667, Blast_Score=218, Evalue=7e-57, Organism=Drosophila melanogaster, GI45551833, Length=360, Percent_Identity=36.6666666666667, Blast_Score=218, Evalue=7e-57, Organism=Drosophila melanogaster, GI24644485, Length=360, Percent_Identity=36.6666666666667, Blast_Score=218, Evalue=7e-57, Organism=Drosophila melanogaster, GI281361218, Length=360, Percent_Identity=36.6666666666667, Blast_Score=218, Evalue=7e-57, Organism=Drosophila melanogaster, GI24644481, Length=360, Percent_Identity=36.6666666666667, Blast_Score=218, Evalue=7e-57, Organism=Drosophila melanogaster, GI24644479, Length=360, Percent_Identity=36.6666666666667, Blast_Score=217, Evalue=1e-56, Organism=Drosophila melanogaster, GI24585582, Length=376, Percent_Identity=34.8404255319149, Blast_Score=216, Evalue=2e-56, Organism=Drosophila melanogaster, GI24583281, Length=361, Percent_Identity=31.5789473684211, Blast_Score=214, Evalue=1e-55, Organism=Drosophila melanogaster, GI24583279, Length=361, Percent_Identity=31.5789473684211, Blast_Score=214, Evalue=1e-55, Organism=Drosophila melanogaster, GI24582080, Length=366, Percent_Identity=36.6120218579235, Blast_Score=211, Evalue=7e-55, Organism=Drosophila melanogaster, GI24582078, Length=366, Percent_Identity=36.6120218579235, Blast_Score=211, Evalue=7e-55, Organism=Drosophila melanogaster, GI17136248, Length=366, Percent_Identity=36.6120218579235, Blast_Score=211, Evalue=7e-55, Organism=Drosophila melanogaster, GI24582075, Length=366, Percent_Identity=36.6120218579235, Blast_Score=211, Evalue=7e-55, Organism=Drosophila melanogaster, GI17985987, Length=375, Percent_Identity=37.3333333333333, Blast_Score=210, Evalue=2e-54, Organism=Drosophila melanogaster, GI24642151, Length=353, Percent_Identity=36.5439093484419, Blast_Score=209, Evalue=4e-54, Organism=Drosophila melanogaster, GI21355075, Length=371, Percent_Identity=33.6927223719677, Blast_Score=209, Evalue=4e-54, Organism=Drosophila melanogaster, GI28575014, Length=368, Percent_Identity=33.695652173913, Blast_Score=208, Evalue=7e-54, Organism=Drosophila melanogaster, GI17136814, Length=379, Percent_Identity=36.6754617414248, Blast_Score=207, Evalue=1e-53, Organism=Drosophila melanogaster, GI21356161, Length=354, Percent_Identity=36.4406779661017, Blast_Score=202, Evalue=3e-52, Organism=Drosophila melanogaster, GI17977678, Length=364, Percent_Identity=35.4395604395604, Blast_Score=201, Evalue=7e-52, Organism=Drosophila melanogaster, GI281365720, Length=315, Percent_Identity=38.7301587301587, Blast_Score=190, Evalue=2e-48, Organism=Drosophila melanogaster, GI28571808, Length=384, Percent_Identity=30.9895833333333, Blast_Score=189, Evalue=4e-48, Organism=Drosophila melanogaster, GI28571809, Length=384, Percent_Identity=30.9895833333333, Blast_Score=189, Evalue=4e-48, Organism=Drosophila melanogaster, GI24584994, Length=386, Percent_Identity=32.9015544041451, Blast_Score=189, Evalue=4e-48, Organism=Drosophila melanogaster, GI24581954, Length=350, Percent_Identity=32, Blast_Score=183, Evalue=3e-46, Organism=Drosophila melanogaster, GI24581952, Length=350, Percent_Identity=32, Blast_Score=183, Evalue=3e-46, Organism=Drosophila melanogaster, GI24581956, Length=350, Percent_Identity=32, Blast_Score=183, Evalue=3e-46, Organism=Drosophila melanogaster, GI21355559, Length=358, Percent_Identity=34.6368715083799, Blast_Score=164, Evalue=9e-41, Organism=Drosophila melanogaster, GI17647335, Length=359, Percent_Identity=30.3621169916435, Blast_Score=156, Evalue=2e-38, Organism=Drosophila melanogaster, GI24642822, Length=365, Percent_Identity=29.5890410958904, Blast_Score=156, Evalue=2e-38, Organism=Drosophila melanogaster, GI24643725, Length=394, Percent_Identity=29.1878172588832, Blast_Score=155, Evalue=7e-38, Organism=Drosophila melanogaster, GI24666101, Length=379, Percent_Identity=29.5514511873351, Blast_Score=147, Evalue=2e-35, Organism=Drosophila melanogaster, GI24668515, Length=326, Percent_Identity=32.5153374233129, Blast_Score=135, Evalue=6e-32, Organism=Drosophila melanogaster, GI20130173, Length=363, Percent_Identity=28.6501377410468, Blast_Score=124, Evalue=2e-28, Organism=Drosophila melanogaster, GI19920478, Length=382, Percent_Identity=28.7958115183246, Blast_Score=121, Evalue=8e-28, Organism=Drosophila melanogaster, GI28571338, Length=221, Percent_Identity=33.4841628959276, Blast_Score=119, Evalue=4e-27, Organism=Drosophila melanogaster, GI18859659, Length=221, Percent_Identity=33.4841628959276, Blast_Score=119, Evalue=4e-27, Organism=Drosophila melanogaster, GI17136666, Length=427, Percent_Identity=27.8688524590164, Blast_Score=104, Evalue=1e-22, Organism=Drosophila melanogaster, GI24640164, Length=349, Percent_Identity=23.2091690544413, Blast_Score=89, Evalue=8e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005580 - InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 50886; Mature: 50755
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIEPTAPPFSTLALAPAVLANLAQLGYTDMTPIQAASLPIALAGHDLIAQAKTGSGKTA CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCEEEECCHHEEECCCCCCCHH AFSLALLARLDTRRFDVQAMVLCPTRELADQVAQEIRRLARAEENVKVLTLCGGTPMRPQ HHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC AASLEHGAHVVVGTPGRIMDHLERGNLALGALKTLVLDEADRMLDMGFFDDIATVVRQCP CCCCCCCCEEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC PERQTLLFSATYPDGIAKLSRQILRNPKEVKLEERHDDSKIRQRFYEVTDDERLHAVGLL CCHHEEEEEECCCHHHHHHHHHHHCCCCCCEEHHCCCHHHHHHHHHHCCCCCHHHHHHHH LKHYRPVSTLAFCNTKQQCRNLLDVLRAQGFHALALHGELEQRERDQVLIQFANRSCSVL HHHCCCHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEE VATDVAARGLDIAQLEAVINVDVTPDPEVHVHRIGRTGRADQDGWALSLASMDEMGRVGG EEECHHHCCCCHHHEEEEEEECCCCCCCEEEEECCCCCCCCCCCCEEEECCHHHHHHCCC IEQALGREVEWHRLAELDASSDAPLLPPMETLQILGGRKDKIRPGDVLGALTGDAGFRGD HHHHHCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCC QIGKINATEFSTYVAVERGIARDALRKLNAGKVKGKKVRVRLMDE CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECC >Mature Secondary Structure TIEPTAPPFSTLALAPAVLANLAQLGYTDMTPIQAASLPIALAGHDLIAQAKTGSGKTA CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCEEEECCHHEEECCCCCCCHH AFSLALLARLDTRRFDVQAMVLCPTRELADQVAQEIRRLARAEENVKVLTLCGGTPMRPQ HHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC AASLEHGAHVVVGTPGRIMDHLERGNLALGALKTLVLDEADRMLDMGFFDDIATVVRQCP CCCCCCCCEEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC PERQTLLFSATYPDGIAKLSRQILRNPKEVKLEERHDDSKIRQRFYEVTDDERLHAVGLL CCHHEEEEEECCCHHHHHHHHHHHCCCCCCEEHHCCCHHHHHHHHHHCCCCCHHHHHHHH LKHYRPVSTLAFCNTKQQCRNLLDVLRAQGFHALALHGELEQRERDQVLIQFANRSCSVL HHHCCCHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEE VATDVAARGLDIAQLEAVINVDVTPDPEVHVHRIGRTGRADQDGWALSLASMDEMGRVGG EEECHHHCCCCHHHEEEEEEECCCCCCCEEEEECCCCCCCCCCCCEEEECCHHHHHHCCC IEQALGREVEWHRLAELDASSDAPLLPPMETLQILGGRKDKIRPGDVLGALTGDAGFRGD HHHHHCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCC QIGKINATEFSTYVAVERGIARDALRKLNAGKVKGKKVRVRLMDE CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2216714; 8253085; 9097039; 9278503; 9016593; 11350034 [H]