| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
Click here to switch to the map view.
The map label for this gene is 17545340
Identifier: 17545340
GI number: 17545340
Start: 667634
End: 667897
Strand: Direct
Name: 17545340
Synonym: RSc0621
Alternate gene names: NA
Gene position: 667634-667897 (Clockwise)
Preceding gene: 17545339
Following gene: 17545344
Centisome position: 17.96
GC content: 53.41
Gene sequence:
>264_bases ATGAAGAAGCGTCTGGTTTTGCTGATTTCCGCTGGGATGTTTCTGGCCGGCAATGCACTGGCACAGGACACCATGAAGAA AGACGAGATGGGAAAGGATGCGATGGGACAAAGCGGAAGCATGGCGAAAGACACGATGGGGAAGGACCATAAGAGCAAGA GCCACACCAAGAAAATGCATGAGAAGGGTGGCATGAGCAAAGACGCCATGGGCAAAGACGCCATGGGCAAGGACTCCATG GGCAAGGACTCCACGAAGCAGTAG
Upstream 100 bases:
>100_bases GAGGACCAGGGGTACAACTGGTTCGGCGGTTCCTGAGCATCCACCTGTACCTGACCGGCAAGTTCGCCGGTTTCCTGCTT ATCTGACAAAGGAGAACACC
Downstream 100 bases:
>100_bases CGGGCTACAGCAGAGTAGCCGCCGCTGGAGAGATATACCGACCGGGGCCGGTACGCGCATTGTGGTCGGCGGCGCTAAGG GTGGCGCTCCCGTTTCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 87; Mature: 87
Protein sequence:
>87_residues MKKRLVLLISAGMFLAGNALAQDTMKKDEMGKDAMGQSGSMAKDTMGKDHKSKSHTKKMHEKGGMSKDAMGKDAMGKDSM GKDSTKQ
Sequences:
>Translated_87_residues MKKRLVLLISAGMFLAGNALAQDTMKKDEMGKDAMGQSGSMAKDTMGKDHKSKSHTKKMHEKGGMSKDAMGKDAMGKDSM GKDSTKQ >Mature_87_residues MKKRLVLLISAGMFLAGNALAQDTMKKDEMGKDAMGQSGSMAKDTMGKDHKSKSHTKKMHEKGGMSKDAMGKDAMGKDSM GKDSTKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9354; Mature: 9354
Theoretical pI: Translated: 10.54; Mature: 10.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 13.8 %Met (Translated Protein) 13.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 13.8 %Met (Mature Protein) 13.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKRLVLLISAGMFLAGNALAQDTMKKDEMGKDAMGQSGSMAKDTMGKDHKSKSHTKKMH CCCCEEEEEECCHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHH EKGGMSKDAMGKDAMGKDSMGKDSTKQ HHCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKKRLVLLISAGMFLAGNALAQDTMKKDEMGKDAMGQSGSMAKDTMGKDHKSKSHTKKMH CCCCEEEEEECCHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHH EKGGMSKDAMGKDAMGKDSMGKDSTKQ HHCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA