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The map label for this gene is pqiA [H]

Identifier: 17545321

GI number: 17545321

Start: 648262

End: 649005

Strand: Reverse

Name: pqiA [H]

Synonym: RSc0602

Alternate gene names: 17545321

Gene position: 649005-648262 (Counterclockwise)

Preceding gene: 17545322

Following gene: 17545320

Centisome position: 17.46

GC content: 72.72

Gene sequence:

>744_bases
ATGACCACCGCCGACGCCACGCCCGCCCCGCCGCCGCAACCGCAGCAGCCGGCCCGCCCGCTGCGCGCCGCCGCGCATGG
GCTGGCGACCTGCGAACGCTGCGGCCTGCTGGCCCGCCTGCCCGGCGCGCGCGAGGGTGCCCGCGCCGCCCTGGCGCAGG
AGGAGGCCCCCGACCACGCCGCCGCCGCACCGGTCTGCCCGCGCTGCCTGTCGCCGATCCACGTGCGCAAGCCCGACAGC
CTCAGGCGCTGCTGGGCGCTGCTGCTGGCCGCCGCCGCCATGTACCTGCCCGCCAACATGCTGCCGGTGATGATCACGGA
AACGCTGCTTGGCACCCAGCAGGACACCATCCTGAGCGGCATCGTCTACCTGTGGACATCGGGCTCGTGGCACCTGGCCA
TCATCGTGTTCATCGCCAGCTTCTTCGTGCCGCTGGCCAAGCTGGGCATCCTGGCGGTGCTGTGCCTGTCGGTGCGGCAG
CGCTGGCGCTGGAAGCCGCGCACGCGCACGCGCCTGTATGTGATCGTCGAGGCGGTCGGCCGCTGGTCGATGCTCGACGT
GTTCGTGATCGCGCTGCTGGCGGGGCTGGTGCACCTGTCCACGCTGGCGGTCATCAAGCCCGGCCCGGGCGTCGCCCCCT
TTGCCGGCGTGGTCGTGCTGACCATGTTCGCCGCCCGCTGTTTCGACCCCCGCCTGATCTGGGACGCCATCGACGAGCCC
GACCCCGAAGAGACCACCGCATGA

Upstream 100 bases:

>100_bases
GCGAGCTCGGCCTGACACGGCCGCCCGCGCAGGCGGATGCCGCCGACGCCCCCGATGCTGCCGCGCCCCCCAACGACAAC
GCCAGCGGCGAGGCACACCC

Downstream 100 bases:

>100_bases
CCGATCCCGTTGATACCCGCGACATCCCCCCGCCCCGCCGCATGAAGCGCAAGCGCTGGCTGCCCTCGCTGATCTGGCTG
GTGCCGATCGTGGCCCTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MTTADATPAPPPQPQQPARPLRAAAHGLATCERCGLLARLPGAREGARAALAQEEAPDHAAAAPVCPRCLSPIHVRKPDS
LRRCWALLLAAAAMYLPANMLPVMITETLLGTQQDTILSGIVYLWTSGSWHLAIIVFIASFFVPLAKLGILAVLCLSVRQ
RWRWKPRTRTRLYVIVEAVGRWSMLDVFVIALLAGLVHLSTLAVIKPGPGVAPFAGVVVLTMFAARCFDPRLIWDAIDEP
DPEETTA

Sequences:

>Translated_247_residues
MTTADATPAPPPQPQQPARPLRAAAHGLATCERCGLLARLPGAREGARAALAQEEAPDHAAAAPVCPRCLSPIHVRKPDS
LRRCWALLLAAAAMYLPANMLPVMITETLLGTQQDTILSGIVYLWTSGSWHLAIIVFIASFFVPLAKLGILAVLCLSVRQ
RWRWKPRTRTRLYVIVEAVGRWSMLDVFVIALLAGLVHLSTLAVIKPGPGVAPFAGVVVLTMFAARCFDPRLIWDAIDEP
DPEETTA
>Mature_246_residues
TTADATPAPPPQPQQPARPLRAAAHGLATCERCGLLARLPGAREGARAALAQEEAPDHAAAAPVCPRCLSPIHVRKPDSL
RRCWALLLAAAAMYLPANMLPVMITETLLGTQQDTILSGIVYLWTSGSWHLAIIVFIASFFVPLAKLGILAVLCLSVRQR
WRWKPRTRTRLYVIVEAVGRWSMLDVFVIALLAGLVHLSTLAVIKPGPGVAPFAGVVVLTMFAARCFDPRLIWDAIDEPD
PEETTA

Specific function: Unknown

COG id: COG2995

COG function: function code S; Uncharacterized paraquat-inducible protein A

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqiA family [H]

Homologues:

Organism=Escherichia coli, GI1787183, Length=238, Percent_Identity=39.9159663865546, Blast_Score=161, Evalue=4e-41,
Organism=Escherichia coli, GI1788137, Length=176, Percent_Identity=42.6136363636364, Blast_Score=135, Evalue=4e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005219
- InterPro:   IPR007498 [H]

Pfam domain/function: PF04403 PqiA [H]

EC number: NA

Molecular weight: Translated: 26749; Mature: 26618

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: PS00392 DDC_GAD_HDC_YDC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTADATPAPPPQPQQPARPLRAAAHGLATCERCGLLARLPGAREGARAALAQEEAPDHA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHCCCCCC
AAAPVCPRCLSPIHVRKPDSLRRCWALLLAAAAMYLPANMLPVMITETLLGTQQDTILSG
CCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHH
IVYLWTSGSWHLAIIVFIASFFVPLAKLGILAVLCLSVRQRWRWKPRTRTRLYVIVEAVG
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHC
RWSMLDVFVIALLAGLVHLSTLAVIKPGPGVAPFAGVVVLTMFAARCFDPRLIWDAIDEP
CHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCC
DPEETTA
CCCCCCC
>Mature Secondary Structure 
TTADATPAPPPQPQQPARPLRAAAHGLATCERCGLLARLPGAREGARAALAQEEAPDHA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHCCCCCC
AAAPVCPRCLSPIHVRKPDSLRRCWALLLAAAAMYLPANMLPVMITETLLGTQQDTILSG
CCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHH
IVYLWTSGSWHLAIIVFIASFFVPLAKLGILAVLCLSVRQRWRWKPRTRTRLYVIVEAVG
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHC
RWSMLDVFVIALLAGLVHLSTLAVIKPGPGVAPFAGVVVLTMFAARCFDPRLIWDAIDEP
CHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCC
DPEETTA
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]