Definition Ralstonia solanacearum GMI1000, complete genome.
Accession NC_003295
Length 3,716,413

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The map label for this gene is 17545314

Identifier: 17545314

GI number: 17545314

Start: 640997

End: 643186

Strand: Direct

Name: 17545314

Synonym: RSc0595

Alternate gene names: NA

Gene position: 640997-643186 (Clockwise)

Preceding gene: 17545313

Following gene: 17545315

Centisome position: 17.25

GC content: 67.31

Gene sequence:

>2190_bases
ATGATTCCGTTCCAGCCACGCGCGCTGGTGCTGGCGCTCGCCGCCGCCCTGCCATCCCTGGCCGCCGTTTCCGCATCGGC
GCAGGACGCCGCCAACCCCGCTGCCGCAGCGGCGTCCTCCACGTCCACGGCGCAAGCCACCGCCGCCAACGTGCGGGACC
TGGGCGAGACGCGCGTCACGGCCAAGCGGCTCGATGCCGCCCGCAACGCGCTGTCGCCGGATACCGGCAGCTCGGTCTAC
CGCTTCGATACCGACGACATCGCCCGCCTGCCGCTGGGCGATGCCACGCCGCTGAACCAGGTGCTGCTGCAGGCGCCGGG
CGTGGTGCAGGATTCGTTCGGCCAGCTGCACGTGCGCGGCGATCACGCCAACCTGCAGTACCGCATCAACGGCGTCATCA
TTCCCGAGCCGATCAGCGGGTTCGGGCAGATGCTCGACACGCGCTTCGCCAACCAGATCAACGTGCTGACCGGCGCGCTG
CCGGCGCAGTACGGCTACCGAACCGCCGGCATCGTCGACATCCAGACCAAGGGCACCGCCACCGATGACGCGGGCGAGCC
CAAGGCCATCAGCGGCGAGATCGGCAGCGTGCTGGGCAGCAACGCCACGCACGAGGTCAACTTGCAGTTGCAGGGCAGCA
AGGACCGCTTCAGCTACTACCTCTCGGGCGTGTTCGCCGAAAACAATCTCGGCATCGAGAACCCCACGGGCAACCGCAAC
GCCACGCACGACCACACCACGCAGAACAAGTCGTTCGGCATGCTCTCGTACCTGCTCGACGCGGACAGCCGGGTGAGCTT
CATGTTCGGCACCGCCAACAGCCGCTTCGAGATTCCGACCCGTCCGGGCCTGGAGCCGCAGTTCACGCTGGGCGGCGTGA
CGCCGCCCGCTTCGCAGGCGCTTAATGCCAATCAGCGCGAGAAGACCGACTTCCAGATCCTGACGTACCAGCAAAAGGTG
TCGCCCAAGCTGGACTACCAGGTGTCGGTGTTCCGCCGCGTGAGCCGCATCGATTATTCGCCGGACCCGGTCGGCGACCT
GGTCTACAACGGCGTGGCCTCGGACATCTCGCGCCGCAACGAAGCCTATGGCGTGCAGGGCGATGCCAGCTACAAGCTGA
ACGACCGCCATACGCTGCGCGCCGGTCTCTTCGCGCAGCGCGAGCGCTTTGCCGTCGACAATGCCTCCACCGTCTTCCCC
GCCGACGACACCGGCGCGCAGACCAGCACCACGCCGTTCACCGTGCTCGACAACTCGAGCGGTTCCGGCACCACCCTCGG
CGTCTATCTGCAGGACGAATGGAAGCCGACCGACCGGCTCACCATCAACTACGGCGCGCGCTACGACCACGTCAACGCCA
TCGTCAGCGAGCAGCAGCTCAGCCCGCGCCTGGGCCTGACCTACGACCTGACCAGCCGCACCCGCCTGCACGCCGGCTAC
GCACGCTACTTCACGCCGCCGCCGACCGAGAAGTTCGATATCACCACGGTGCAGAAATTCATCGGCACCACGAATGCGCT
GCCGTCGGATGCCAACACGGCCGTGAAGTCCGAGCGCTCGAATTACTTCGACCTCGGCATCTCGCACCAGCTCACGCCGC
ACCTGACGCTGGGGCTGGATGCGTATTACCGCGACGTGCGCCACCTGCAGGACGAAGGCCAGTTCGGCAACGCGCTGCTG
TTCTCGGCCTTCAACTACGAACGCGGCCGCATCTACGGGCTGGAGGCCAGCGCCAATTACCGCGAGGGCAATTTCGGCGC
CTACCTGAACCTGGGCGTGTCGCGCGCGCAGGGCAAGGGCATCGAAACCGGCCAGTTCAACTTCGACGACGCGGAGCTGG
CCTACATCAACAGCCACTGGGTCAGCCTCGACCACGACCAGCGCCTGACCGCGTCGGCCGGCGTGTCGTACCAGTACCGG
GGCACCACCTGGCTGGCCGATGCGCTGTTCGGCTCGGGCCTGCGCAGCGGTTTTGCCAATACCGACCGCTTGCCGGCGTA
CTGGCAACTGAACCTCGGCGCCGCGCGCGATTTCAACCTGCCGCTGGCGGGCAAGCTCAAGACCCGGCTGACGGTGCTCA
ACGTGCTCGACCGCAGCTACGCGCTGCGCGACGGCACGGGCATCGGCGTGGGCGCGCCGCAGTTCGCGCCGCGCCGCACC
TTCCTGCTGTCGGTCAGCAAGCCGTTCTGA

Upstream 100 bases:

>100_bases
CGATCCACCCTTCAGCCTTTGATGCTTCGTTCGTTCGCCGTCATGCCGCGTTGCGCGTGACGGCTGCTTTTCGCATTCGT
TCGCATTCAAAGGTCTGTTC

Downstream 100 bases:

>100_bases
TGGGACGGGGAGGGCACGCGCATCGCCCGGGCCCTCCCCATGCCGCATCCGGATACACCGCTCACATCGGCGGGGGCGGT
CCGTCCTTGTCGACCAGCAC

Product: outer membrane receptor signal peptide protein

Products: NA

Alternate protein names: Nb-Dependent Outer Membrane Receptor Protein; NB Dependent Receptor; NB-Dependent Receptor Plug; Outer Membrane Insertion C-Terminal Signal; NB-Dependent Outer Membrane Receptor; Outer Membrane Receptor For Iron Transport; Outer Membrane Colicin I Receptor; Nb-Dependent Receptor; NB Potential Colicin Receptor; Cna Protein B-Type Domain Protein; Colicin I Receptor; NB-Dependent Siderophore Receptor; Ferrichrome-Iron Receptor

Number of amino acids: Translated: 729; Mature: 729

Protein sequence:

>729_residues
MIPFQPRALVLALAAALPSLAAVSASAQDAANPAAAAASSTSTAQATAANVRDLGETRVTAKRLDAARNALSPDTGSSVY
RFDTDDIARLPLGDATPLNQVLLQAPGVVQDSFGQLHVRGDHANLQYRINGVIIPEPISGFGQMLDTRFANQINVLTGAL
PAQYGYRTAGIVDIQTKGTATDDAGEPKAISGEIGSVLGSNATHEVNLQLQGSKDRFSYYLSGVFAENNLGIENPTGNRN
ATHDHTTQNKSFGMLSYLLDADSRVSFMFGTANSRFEIPTRPGLEPQFTLGGVTPPASQALNANQREKTDFQILTYQQKV
SPKLDYQVSVFRRVSRIDYSPDPVGDLVYNGVASDISRRNEAYGVQGDASYKLNDRHTLRAGLFAQRERFAVDNASTVFP
ADDTGAQTSTTPFTVLDNSSGSGTTLGVYLQDEWKPTDRLTINYGARYDHVNAIVSEQQLSPRLGLTYDLTSRTRLHAGY
ARYFTPPPTEKFDITTVQKFIGTTNALPSDANTAVKSERSNYFDLGISHQLTPHLTLGLDAYYRDVRHLQDEGQFGNALL
FSAFNYERGRIYGLEASANYREGNFGAYLNLGVSRAQGKGIETGQFNFDDAELAYINSHWVSLDHDQRLTASAGVSYQYR
GTTWLADALFGSGLRSGFANTDRLPAYWQLNLGAARDFNLPLAGKLKTRLTVLNVLDRSYALRDGTGIGVGAPQFAPRRT
FLLSVSKPF

Sequences:

>Translated_729_residues
MIPFQPRALVLALAAALPSLAAVSASAQDAANPAAAAASSTSTAQATAANVRDLGETRVTAKRLDAARNALSPDTGSSVY
RFDTDDIARLPLGDATPLNQVLLQAPGVVQDSFGQLHVRGDHANLQYRINGVIIPEPISGFGQMLDTRFANQINVLTGAL
PAQYGYRTAGIVDIQTKGTATDDAGEPKAISGEIGSVLGSNATHEVNLQLQGSKDRFSYYLSGVFAENNLGIENPTGNRN
ATHDHTTQNKSFGMLSYLLDADSRVSFMFGTANSRFEIPTRPGLEPQFTLGGVTPPASQALNANQREKTDFQILTYQQKV
SPKLDYQVSVFRRVSRIDYSPDPVGDLVYNGVASDISRRNEAYGVQGDASYKLNDRHTLRAGLFAQRERFAVDNASTVFP
ADDTGAQTSTTPFTVLDNSSGSGTTLGVYLQDEWKPTDRLTINYGARYDHVNAIVSEQQLSPRLGLTYDLTSRTRLHAGY
ARYFTPPPTEKFDITTVQKFIGTTNALPSDANTAVKSERSNYFDLGISHQLTPHLTLGLDAYYRDVRHLQDEGQFGNALL
FSAFNYERGRIYGLEASANYREGNFGAYLNLGVSRAQGKGIETGQFNFDDAELAYINSHWVSLDHDQRLTASAGVSYQYR
GTTWLADALFGSGLRSGFANTDRLPAYWQLNLGAARDFNLPLAGKLKTRLTVLNVLDRSYALRDGTGIGVGAPQFAPRRT
FLLSVSKPF
>Mature_729_residues
MIPFQPRALVLALAAALPSLAAVSASAQDAANPAAAAASSTSTAQATAANVRDLGETRVTAKRLDAARNALSPDTGSSVY
RFDTDDIARLPLGDATPLNQVLLQAPGVVQDSFGQLHVRGDHANLQYRINGVIIPEPISGFGQMLDTRFANQINVLTGAL
PAQYGYRTAGIVDIQTKGTATDDAGEPKAISGEIGSVLGSNATHEVNLQLQGSKDRFSYYLSGVFAENNLGIENPTGNRN
ATHDHTTQNKSFGMLSYLLDADSRVSFMFGTANSRFEIPTRPGLEPQFTLGGVTPPASQALNANQREKTDFQILTYQQKV
SPKLDYQVSVFRRVSRIDYSPDPVGDLVYNGVASDISRRNEAYGVQGDASYKLNDRHTLRAGLFAQRERFAVDNASTVFP
ADDTGAQTSTTPFTVLDNSSGSGTTLGVYLQDEWKPTDRLTINYGARYDHVNAIVSEQQLSPRLGLTYDLTSRTRLHAGY
ARYFTPPPTEKFDITTVQKFIGTTNALPSDANTAVKSERSNYFDLGISHQLTPHLTLGLDAYYRDVRHLQDEGQFGNALL
FSAFNYERGRIYGLEASANYREGNFGAYLNLGVSRAQGKGIETGQFNFDDAELAYINSHWVSLDHDQRLTASAGVSYQYR
GTTWLADALFGSGLRSGFANTDRLPAYWQLNLGAARDFNLPLAGKLKTRLTVLNVLDRSYALRDGTGIGVGAPQFAPRRT
FLLSVSKPF

Specific function: Unknown

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 79234; Mature: 79234

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPFQPRALVLALAAALPSLAAVSASAQDAANPAAAAASSTSTAQATAANVRDLGETRVT
CCCCCHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHH
AKRLDAARNALSPDTGSSVYRFDTDDIARLPLGDATPLNQVLLQAPGVVQDSFGQLHVRG
HHHHHHHHHCCCCCCCCCEEEECCCCCEECCCCCCCCHHHHHHHCCCCEECCCCEEEEEE
DHANLQYRINGVIIPEPISGFGQMLDTRFANQINVLTGALPAQYGYRTAGIVDIQTKGTA
CCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCC
TDDAGEPKAISGEIGSVLGSNATHEVNLQLQGSKDRFSYYLSGVFAENNLGIENPTGNRN
CCCCCCCCEECCHHHHHHCCCCCEEEEEEEECCCHHEEEEEEEEEECCCCCCCCCCCCCC
ATHDHTTQNKSFGMLSYLLDADSRVSFMFGTANSRFEIPTRPGLEPQFTLGGVTPPASQA
CCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCEEECCCCCCCCCCEEECCCCCCHHHH
LNANQREKTDFQILTYQQKVSPKLDYQVSVFRRVSRIDYSPDPVGDLVYNGVASDISRRN
CCCCCCCCCCEEEEEEHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
EAYGVQGDASYKLNDRHTLRAGLFAQRERFAVDNASTVFPADDTGAQTSTTPFTVLDNSS
HHCCCCCCCCEEECCCHHHHHHHHHHHHHHEECCCCEEECCCCCCCCCCCCCEEEEECCC
GSGTTLGVYLQDEWKPTDRLTINYGARYDHVNAIVSEQQLSPRLGLTYDLTSRTRLHAGY
CCCCEEEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCEEEECCCCCEEECCH
ARYFTPPPTEKFDITTVQKFIGTTNALPSDANTAVKSERSNYFDLGISHQLTPHLTLGLD
HCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHCCCCEEEECCCCCCCCCEEECHH
AYYRDVRHLQDEGQFGNALLFSAFNYERGRIYGLEASANYREGNFGAYLNLGVSRAQGKG
HHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCC
IETGQFNFDDAELAYINSHWVSLDHDQRLTASAGVSYQYRGTTWLADALFGSGLRSGFAN
CCCCCCCCCCCEEEEEECEEEEECCCCCEEHHCCCEEEECCCHHHHHHHHHHHHHHCCCC
TDRLPAYWQLNLGAARDFNLPLAGKLKTRLTVLNVLDRSYALRDGTGIGVGAPQFAPRRT
CCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCEE
FLLSVSKPF
EEEEECCCC
>Mature Secondary Structure
MIPFQPRALVLALAAALPSLAAVSASAQDAANPAAAAASSTSTAQATAANVRDLGETRVT
CCCCCHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHH
AKRLDAARNALSPDTGSSVYRFDTDDIARLPLGDATPLNQVLLQAPGVVQDSFGQLHVRG
HHHHHHHHHCCCCCCCCCEEEECCCCCEECCCCCCCCHHHHHHHCCCCEECCCCEEEEEE
DHANLQYRINGVIIPEPISGFGQMLDTRFANQINVLTGALPAQYGYRTAGIVDIQTKGTA
CCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCC
TDDAGEPKAISGEIGSVLGSNATHEVNLQLQGSKDRFSYYLSGVFAENNLGIENPTGNRN
CCCCCCCCEECCHHHHHHCCCCCEEEEEEEECCCHHEEEEEEEEEECCCCCCCCCCCCCC
ATHDHTTQNKSFGMLSYLLDADSRVSFMFGTANSRFEIPTRPGLEPQFTLGGVTPPASQA
CCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCEEECCCCCCCCCCEEECCCCCCHHHH
LNANQREKTDFQILTYQQKVSPKLDYQVSVFRRVSRIDYSPDPVGDLVYNGVASDISRRN
CCCCCCCCCCEEEEEEHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
EAYGVQGDASYKLNDRHTLRAGLFAQRERFAVDNASTVFPADDTGAQTSTTPFTVLDNSS
HHCCCCCCCCEEECCCHHHHHHHHHHHHHHEECCCCEEECCCCCCCCCCCCCEEEEECCC
GSGTTLGVYLQDEWKPTDRLTINYGARYDHVNAIVSEQQLSPRLGLTYDLTSRTRLHAGY
CCCCEEEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCEEEECCCCCEEECCH
ARYFTPPPTEKFDITTVQKFIGTTNALPSDANTAVKSERSNYFDLGISHQLTPHLTLGLD
HCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHCCCCEEEECCCCCCCCCEEECHH
AYYRDVRHLQDEGQFGNALLFSAFNYERGRIYGLEASANYREGNFGAYLNLGVSRAQGKG
HHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCC
IETGQFNFDDAELAYINSHWVSLDHDQRLTASAGVSYQYRGTTWLADALFGSGLRSGFAN
CCCCCCCCCCCEEEEEECEEEEECCCCCEEHHCCCEEEECCCHHHHHHHHHHHHHHCCCC
TDRLPAYWQLNLGAARDFNLPLAGKLKTRLTVLNVLDRSYALRDGTGIGVGAPQFAPRRT
CCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCEE
FLLSVSKPF
EEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA