Click here to switch to the map view.

The map label for this gene is 17545301

Identifier: 17545301

GI number: 17545301

Start: 625573

End: 626328

Strand: Reverse

Name: 17545301

Synonym: RSc0582

Alternate gene names: NA

Gene position: 626328-625573 (Counterclockwise)

Preceding gene: 17545302

Following gene: 17545300

Centisome position: 16.85

GC content: 56.48

Gene sequence:

>756_bases
ATGGCACTGAGTTATTACAATTCGATCGACGACCTCCTGGGACGCCGTGAAACCCGCTATTTTGGAAACGGATACATCAA
CACCACACGGTGCGTTTCCGATTTTGAATGCTTCGAGACCGATACAGGATTGCAATTCTCGTGCGTCGCGGCACTGGAAC
TCCCTTCCCTATGGTCGGCAAAGGGCGATTCAAAGCAAAAACCGCATCTGAGCAGCATCGATGTGATCGAACTGGCGACC
GAGTGCACGCGCAGGGTCTTTCACCAAGTCTTCGGCGGACGCGAGTTTTCTCTGGAGTCCATCCGAAAGCTCCTGGTTGG
TGCGGGCAGCGAGCCCGTGGAAGAGGCGCTGGACGCCATCTCGATCACCGGTGTGGCCAGCCGGCTGCCGGACGGGGCGT
ACCATCTGCGGGCGCAGATCTCCAGCATGAGCGTCGACGTCACTTTCTCGGTGCGGGAAGAAGGCAGGCCGCGGATGACC
GGCGAAAACAGGAATCCGATATCGATCGAGAATGTCACGCTCAACCGGAACGCATTGACAGCCTCGGCCATTGTGCTGCC
TTTTCAGGAAAGCCATGACGACAGTTGGTCGCTGTCGGACTGTTTTGCATCCGTGGCGCAGGTCGGACAAGCGCTCCTGT
ACAACCTGGACGGCATCGTCCGTGAAGCAAGCAATACCCTGTGGATGCGAAAAATCTCAATGACCCTTTTTTCCGGAATG
CAACATGCCACAGCCGCTCTATGTCAGGCTGAATAA

Upstream 100 bases:

>100_bases
TCATACAAAAACCGGCCAGACCCTCGGTAGCATGGCGATCCTCTTTAAACCCGGCCTCGCCAAAACATGCGAGGCATCAA
TACCCGCAAGACGCATCGAC

Downstream 100 bases:

>100_bases
TTCGAAGAAATTGAAATTGGGAAATGATTATTGGCGCAGCGCCGATGTATTCTGCATCTTCTGCAATACCAATATCGTTT
GCCGGGTCGCGCACAAACTC

Product: hypothetical protein

Products: NA

Alternate protein names: Avrd-Related Protein

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MALSYYNSIDDLLGRRETRYFGNGYINTTRCVSDFECFETDTGLQFSCVAALELPSLWSAKGDSKQKPHLSSIDVIELAT
ECTRRVFHQVFGGREFSLESIRKLLVGAGSEPVEEALDAISITGVASRLPDGAYHLRAQISSMSVDVTFSVREEGRPRMT
GENRNPISIENVTLNRNALTASAIVLPFQESHDDSWSLSDCFASVAQVGQALLYNLDGIVREASNTLWMRKISMTLFSGM
QHATAALCQAE

Sequences:

>Translated_251_residues
MALSYYNSIDDLLGRRETRYFGNGYINTTRCVSDFECFETDTGLQFSCVAALELPSLWSAKGDSKQKPHLSSIDVIELAT
ECTRRVFHQVFGGREFSLESIRKLLVGAGSEPVEEALDAISITGVASRLPDGAYHLRAQISSMSVDVTFSVREEGRPRMT
GENRNPISIENVTLNRNALTASAIVLPFQESHDDSWSLSDCFASVAQVGQALLYNLDGIVREASNTLWMRKISMTLFSGM
QHATAALCQAE
>Mature_250_residues
ALSYYNSIDDLLGRRETRYFGNGYINTTRCVSDFECFETDTGLQFSCVAALELPSLWSAKGDSKQKPHLSSIDVIELATE
CTRRVFHQVFGGREFSLESIRKLLVGAGSEPVEEALDAISITGVASRLPDGAYHLRAQISSMSVDVTFSVREEGRPRMTG
ENRNPISIENVTLNRNALTASAIVLPFQESHDDSWSLSDCFASVAQVGQALLYNLDGIVREASNTLWMRKISMTLFSGMQ
HATAALCQAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27674; Mature: 27543

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALSYYNSIDDLLGRRETRYFGNGYINTTRCVSDFECFETDTGLQFSCVAALELPSLWSA
CCCCHHHHHHHHHCCHHCCEECCCCCCHHHHHHHHHHHCCCCCCEEEEEEEHHCCHHHCC
KGDSKQKPHLSSIDVIELATECTRRVFHQVFGGREFSLESIRKLLVGAGSEPVEEALDAI
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHH
SITGVASRLPDGAYHLRAQISSMSVDVTFSVREEGRPRMTGENRNPISIENVTLNRNALT
HHHHHHHHCCCCHHHHHEEHHHEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCEE
ASAIVLPFQESHDDSWSLSDCFASVAQVGQALLYNLDGIVREASNTLWMRKISMTLFSGM
EEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
QHATAALCQAE
HHHHHHHHCCC
>Mature Secondary Structure 
ALSYYNSIDDLLGRRETRYFGNGYINTTRCVSDFECFETDTGLQFSCVAALELPSLWSA
CCCHHHHHHHHHCCHHCCEECCCCCCHHHHHHHHHHHCCCCCCEEEEEEEHHCCHHHCC
KGDSKQKPHLSSIDVIELATECTRRVFHQVFGGREFSLESIRKLLVGAGSEPVEEALDAI
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHH
SITGVASRLPDGAYHLRAQISSMSVDVTFSVREEGRPRMTGENRNPISIENVTLNRNALT
HHHHHHHHCCCCHHHHHEEHHHEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCEE
ASAIVLPFQESHDDSWSLSDCFASVAQVGQALLYNLDGIVREASNTLWMRKISMTLFSGM
EEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
QHATAALCQAE
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA