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The map label for this gene is yfgC [C]

Identifier: 17545280

GI number: 17545280

Start: 605859

End: 607544

Strand: Direct

Name: yfgC [C]

Synonym: RSc0561

Alternate gene names: 17545280

Gene position: 605859-607544 (Clockwise)

Preceding gene: 17545278

Following gene: 17545287

Centisome position: 16.3

GC content: 70.88

Gene sequence:

>1686_bases
ATGACGCTCTCTTTCTTCCGGCCGCGCGCCCGCAAGGTGACGGCCGCCGTGCTGTTGATGACGTGGCTTGCTCCCGTGTC
GCCGTTGGCGCTGGCGCAGCCGGCGTCTGTTCCCGCTGCGCCGGCCGGCGCGGCGGCGGCGGAGCAGGTGCAGAGCAACC
TGAACCGCAGCGTGCAGATCGGCCGCCAGTCGCCGTATCTGCAGAAAGACGCGACGATCATCGATGCGCCGACCTACGAG
TTGCCTGACATGGGCGATCCGTCCACGGCGGCGCTGTCGCCGGAGATGGAGCGCCGTCTGGGCGACCGCGTGATGCGGCA
GATCCGGCGCGACCCGGATTATGTGCCGGATCCGCTGCTGTCGGACTACCTGAACGATATCGGCTACCGGCTGATCGAGG
CGGCGCGACGGCAGCATGTGGCGGGCAGTACGTCGGCGTCGAGCTTCGAGCTGTTCGCGGTGCGCGATCCGGGCATCAAC
GCGTTTGCGCTGCCGGGCGGGTATATCGGCGTCAACACGGGCACGCTGGTGGCGACGGAGAGCGAATCGGAGCTGGCCTC
GGTGCTCGGCCACGAGATCGGCCACGTGCTGCAGCGGCACATCGCGCGCGGCATCGACAAGTCGGGCGAGTCGATGTGGA
TTGCGCTGGCGTCGATCCTGCTGGCGGGGCTGGCGGCCACCAAGAGCGGCGACGCGGCGCAGGCGCTGGCGGTGGGCGGG
CAGGCGGCGGCGGTGTCGAACCAGCTGGCGTTTTCGCGCGGCGCGGAGCGCGAGGCCGACCGCGTCGGCTTTACGCTGCT
GACCGGCGCCGGCTACAACCCCGACGGCATGCCCGATTTCTTCCGACGGCTGCAGCGCGTGAGCAGCATCGCGGACACCG
GCGCCGTTCCCGGCTACGCGCGCACCCACCCGCTGACCGGCGAGCGCATCGCCGACATGGAAGACCGCGCGCGCGGCCTG
CCGCACCCGCGCCAGCCGCAGCGGCCGGCGTTCGGCTTTGCCAAGGCGCGTGCGCGCGTGCTGCAGGAGACCTCGACCAG
CGCCTATCTCGACGTGCGCAATGCGATGCGCTCGCAGCTGGCCTCCGCGCCGGATGCGCCGGCCGAGAAACGCGCGGCGC
TGTGGTACGGCATCGCCGTCGCCGAGCAACTGGCCGGGCAGCTGGACCCCGCGGAGCAGGCGCTGCTCGAAGCGCGGCGG
CTGTACGGCAACATCCCCGGCCTCACCTCGGGCAGTCCGAGCCTGGATGTGACTGCCATCGAACTGGCCCGTGCCCGCAA
TCGCGTGCCGGAGGCGCTGACGATGGCACGGGCCGCGCTGGCGGCGTATCCGCTGTCGCGTGCGGTCGGCATTACCTATG
CGCAGACGCTGCTGGCGGCGGGCCGCGCGGGCGATGCGATTCCCTATCTGCAGGACAAGGCGCGCGAGGACACCGCACAG
CCGATCTGGTGGGACATGCTGGCCCGCGCCTATGCGGACCAGGGCAAGCGCGTCGAGCAGCATCGCGCGCTGGCCGAGAA
GTACGCGCGCGACGGTGCCTGGGGCGCGGCAGTGGAGCAGCTCAAGCTCGCGCGCGACGCGGGCGATGCGGATTTCTATA
CGCTGTCCGAGGTCGATGCGCGGCTGCACCAGATGGAGCGCCAGTACCGCGAAGAGAAGCAGGAAGAGAAGGCGCTGCCG
AAGTAG

Upstream 100 bases:

>100_bases
GCGGCATGGATGACGGTGCTTGGTGTGAAGCGATTTATGATAGCAAGTGCCCAGCGCCCGGCGATGCCGCCGGGTGGATT
CCGCCCCACGCGCATTCCGT

Downstream 100 bases:

>100_bases
CGGGCCGGCCGGCGTCAGGCGAGCGCGGCCGGATGCCGGACGAAGCCGAAGCGCCGTTCGGCCTCGTCGCTGCGGATCGG
CTGAATGTCGAAGGTGCGAT

Product: signal peptide protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 561; Mature: 560

Protein sequence:

>561_residues
MTLSFFRPRARKVTAAVLLMTWLAPVSPLALAQPASVPAAPAGAAAAEQVQSNLNRSVQIGRQSPYLQKDATIIDAPTYE
LPDMGDPSTAALSPEMERRLGDRVMRQIRRDPDYVPDPLLSDYLNDIGYRLIEAARRQHVAGSTSASSFELFAVRDPGIN
AFALPGGYIGVNTGTLVATESESELASVLGHEIGHVLQRHIARGIDKSGESMWIALASILLAGLAATKSGDAAQALAVGG
QAAAVSNQLAFSRGAEREADRVGFTLLTGAGYNPDGMPDFFRRLQRVSSIADTGAVPGYARTHPLTGERIADMEDRARGL
PHPRQPQRPAFGFAKARARVLQETSTSAYLDVRNAMRSQLASAPDAPAEKRAALWYGIAVAEQLAGQLDPAEQALLEARR
LYGNIPGLTSGSPSLDVTAIELARARNRVPEALTMARAALAAYPLSRAVGITYAQTLLAAGRAGDAIPYLQDKAREDTAQ
PIWWDMLARAYADQGKRVEQHRALAEKYARDGAWGAAVEQLKLARDAGDADFYTLSEVDARLHQMERQYREEKQEEKALP
K

Sequences:

>Translated_561_residues
MTLSFFRPRARKVTAAVLLMTWLAPVSPLALAQPASVPAAPAGAAAAEQVQSNLNRSVQIGRQSPYLQKDATIIDAPTYE
LPDMGDPSTAALSPEMERRLGDRVMRQIRRDPDYVPDPLLSDYLNDIGYRLIEAARRQHVAGSTSASSFELFAVRDPGIN
AFALPGGYIGVNTGTLVATESESELASVLGHEIGHVLQRHIARGIDKSGESMWIALASILLAGLAATKSGDAAQALAVGG
QAAAVSNQLAFSRGAEREADRVGFTLLTGAGYNPDGMPDFFRRLQRVSSIADTGAVPGYARTHPLTGERIADMEDRARGL
PHPRQPQRPAFGFAKARARVLQETSTSAYLDVRNAMRSQLASAPDAPAEKRAALWYGIAVAEQLAGQLDPAEQALLEARR
LYGNIPGLTSGSPSLDVTAIELARARNRVPEALTMARAALAAYPLSRAVGITYAQTLLAAGRAGDAIPYLQDKAREDTAQ
PIWWDMLARAYADQGKRVEQHRALAEKYARDGAWGAAVEQLKLARDAGDADFYTLSEVDARLHQMERQYREEKQEEKALP
K
>Mature_560_residues
TLSFFRPRARKVTAAVLLMTWLAPVSPLALAQPASVPAAPAGAAAAEQVQSNLNRSVQIGRQSPYLQKDATIIDAPTYEL
PDMGDPSTAALSPEMERRLGDRVMRQIRRDPDYVPDPLLSDYLNDIGYRLIEAARRQHVAGSTSASSFELFAVRDPGINA
FALPGGYIGVNTGTLVATESESELASVLGHEIGHVLQRHIARGIDKSGESMWIALASILLAGLAATKSGDAAQALAVGGQ
AAAVSNQLAFSRGAEREADRVGFTLLTGAGYNPDGMPDFFRRLQRVSSIADTGAVPGYARTHPLTGERIADMEDRARGLP
HPRQPQRPAFGFAKARARVLQETSTSAYLDVRNAMRSQLASAPDAPAEKRAALWYGIAVAEQLAGQLDPAEQALLEARRL
YGNIPGLTSGSPSLDVTAIELARARNRVPEALTMARAALAAYPLSRAVGITYAQTLLAAGRAGDAIPYLQDKAREDTAQP
IWWDMLARAYADQGKRVEQHRALAEKYARDGAWGAAVEQLKLARDAGDADFYTLSEVDARLHQMERQYREEKQEEKALPK

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=444, Percent_Identity=31.3063063063063, Blast_Score=160, Evalue=2e-40,
Organism=Saccharomyces cerevisiae, GI6322940, Length=235, Percent_Identity=25.1063829787234, Blast_Score=69, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 60539; Mature: 60408

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLSFFRPRARKVTAAVLLMTWLAPVSPLALAQPASVPAAPAGAAAAEQVQSNLNRSVQI
CCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCHHHHHHHHHHCCHHEEC
GRQSPYLQKDATIIDAPTYELPDMGDPSTAALSPEMERRLGDRVMRQIRRDPDYVPDPLL
CCCCCCCCCCCEEEECCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHH
SDYLNDIGYRLIEAARRQHVAGSTSASSFELFAVRDPGINAFALPGGYIGVNTGTLVATE
HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCEEECCCCEEECCCCEEEEEC
SESELASVLGHEIGHVLQRHIARGIDKSGESMWIALASILLAGLAATKSGDAAQALAVGG
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCC
QAAAVSNQLAFSRGAEREADRVGFTLLTGAGYNPDGMPDFFRRLQRVSSIADTGAVPGYA
HHHHHHHHHHHHCCCCHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
RTHPLTGERIADMEDRARGLPHPRQPQRPAFGFAKARARVLQETSTSAYLDVRNAMRSQL
CCCCCCCHHHHCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
ASAPDAPAEKRAALWYGIAVAEQLAGQLDPAEQALLEARRLYGNIPGLTSGSPSLDVTAI
HCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
ELARARNRVPEALTMARAALAAYPLSRAVGITYAQTLLAAGRAGDAIPYLQDKAREDTAQ
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCC
PIWWDMLARAYADQGKRVEQHRALAEKYARDGAWGAAVEQLKLARDAGDADFYTLSEVDA
CHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHH
RLHQMERQYREEKQEEKALPK
HHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TLSFFRPRARKVTAAVLLMTWLAPVSPLALAQPASVPAAPAGAAAAEQVQSNLNRSVQI
CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCHHHHHHHHHHCCHHEEC
GRQSPYLQKDATIIDAPTYELPDMGDPSTAALSPEMERRLGDRVMRQIRRDPDYVPDPLL
CCCCCCCCCCCEEEECCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHH
SDYLNDIGYRLIEAARRQHVAGSTSASSFELFAVRDPGINAFALPGGYIGVNTGTLVATE
HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCEEECCCCEEECCCCEEEEEC
SESELASVLGHEIGHVLQRHIARGIDKSGESMWIALASILLAGLAATKSGDAAQALAVGG
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCC
QAAAVSNQLAFSRGAEREADRVGFTLLTGAGYNPDGMPDFFRRLQRVSSIADTGAVPGYA
HHHHHHHHHHHHCCCCHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
RTHPLTGERIADMEDRARGLPHPRQPQRPAFGFAKARARVLQETSTSAYLDVRNAMRSQL
CCCCCCCHHHHCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
ASAPDAPAEKRAALWYGIAVAEQLAGQLDPAEQALLEARRLYGNIPGLTSGSPSLDVTAI
HCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
ELARARNRVPEALTMARAALAAYPLSRAVGITYAQTLLAAGRAGDAIPYLQDKAREDTAQ
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCC
PIWWDMLARAYADQGKRVEQHRALAEKYARDGAWGAAVEQLKLARDAGDADFYTLSEVDA
CHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHH
RLHQMERQYREEKQEEKALPK
HHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]