| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is ybeZ [H]
Identifier: 17545249
GI number: 17545249
Start: 568651
End: 569628
Strand: Reverse
Name: ybeZ [H]
Synonym: RSc0530
Alternate gene names: 17545249
Gene position: 569628-568651 (Counterclockwise)
Preceding gene: 17545250
Following gene: 17545248
Centisome position: 15.33
GC content: 68.61
Gene sequence:
>978_bases TTGAACAAAGCGAAACCCCACGAGTTCGTCGCCCCGCGCGACGACAACGCGCGCCTGCAGAACCTGTGCGGGCCGCTCGA TGAAAACCTGCGCCAGATCGAGCAGGCACTCGACGTATCGATCATCCGCCGCGGCCATCGCCTGACGGTGCGCGGCGAGC AGGCCGCCCAGGCGGTGGCGGCGCTGGAGCTGTTCTACAACCAGGCGCGCGAGCCGCTGACGGTGGACGACGTGCAGCTC GGCCTGATCGAGACGCGCCCGCTGTCCGAGCGCATTCCGGTGGAAGCCCCCAACGGCGCGGACGAATCGCCCGTGCTGCA CACGCGCCGCACCGACCTGCACGGCCGCACCCCGGCGCAGCGCGAATACCTGCGCAGCATCCTGTCGCACGACCTGTCGT TCGGCATCGGCCCGGCGGGCACCGGCAAGACCTACCTGGCCGTCGCCTGCGCGGTGGATGCGCTGGAGCGCGACGCCGTC AAGCGCATCGTGCTGACGCGCCCGGCCGTGGAAGCCGGCGAGCGCCTGGGCTTCCTGCCCGGCGACCTCGCGCAGAAGGT GGACCCGTACCTGCGCCCGCTGTACGACGCGCTGTACGACCTGCTCGGCTTCGACAAGACGCAGAAGATGTTCGAGCGCC AGATGATCGAGATCGCGCCGCTGGCCTACATGCGCGGCCGCACGCTCAACCACGCCTTCATCATCCTGGACGAGGCGCAG AACACCACGCCCGAGCAGATGAAGATGTTCCTCACGCGCATCGGCTTCGGCTCCAAGGCGGTCATCACCGGCGACACCAC GCAGATCGACTTGCCGCGCGGCCAGAAGAGCGGCCTGATCGAGGCACAGCACGTGCTGCGCGACGTGCGCGGCGTGTCGA TGACGCGCTTCTCCAGCGTCGACGTGGTGCGGCACCCGCTGGTCGCCCGCATCGTCGAGGCCTATGACGAATTCCATGCA CAGCACAAGGACACCTGA
Upstream 100 bases:
>100_bases TGCTGGACGTGCGCATCGTGCATGCGTATCCGCACTCGCTGCGCGGGGACGTGGTTGAACAGCGCCCGGACGGCGTGACC CAGCACTAGGCACACCCATC
Downstream 100 bases:
>100_bases CCGTGGCTAAACCGAAGAAGACCCAACCCGCCGCCACCGCCCCCCGCGTCGACGTGTTCGACGCCAAGGGCAAGCCGAAG ACGGTGGACGCCAGCGCCCT
Product: PHOH-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MNKAKPHEFVAPRDDNARLQNLCGPLDENLRQIEQALDVSIIRRGHRLTVRGEQAAQAVAALELFYNQAREPLTVDDVQL GLIETRPLSERIPVEAPNGADESPVLHTRRTDLHGRTPAQREYLRSILSHDLSFGIGPAGTGKTYLAVACAVDALERDAV KRIVLTRPAVEAGERLGFLPGDLAQKVDPYLRPLYDALYDLLGFDKTQKMFERQMIEIAPLAYMRGRTLNHAFIILDEAQ NTTPEQMKMFLTRIGFGSKAVITGDTTQIDLPRGQKSGLIEAQHVLRDVRGVSMTRFSSVDVVRHPLVARIVEAYDEFHA QHKDT
Sequences:
>Translated_325_residues MNKAKPHEFVAPRDDNARLQNLCGPLDENLRQIEQALDVSIIRRGHRLTVRGEQAAQAVAALELFYNQAREPLTVDDVQL GLIETRPLSERIPVEAPNGADESPVLHTRRTDLHGRTPAQREYLRSILSHDLSFGIGPAGTGKTYLAVACAVDALERDAV KRIVLTRPAVEAGERLGFLPGDLAQKVDPYLRPLYDALYDLLGFDKTQKMFERQMIEIAPLAYMRGRTLNHAFIILDEAQ NTTPEQMKMFLTRIGFGSKAVITGDTTQIDLPRGQKSGLIEAQHVLRDVRGVSMTRFSSVDVVRHPLVARIVEAYDEFHA QHKDT >Mature_325_residues MNKAKPHEFVAPRDDNARLQNLCGPLDENLRQIEQALDVSIIRRGHRLTVRGEQAAQAVAALELFYNQAREPLTVDDVQL GLIETRPLSERIPVEAPNGADESPVLHTRRTDLHGRTPAQREYLRSILSHDLSFGIGPAGTGKTYLAVACAVDALERDAV KRIVLTRPAVEAGERLGFLPGDLAQKVDPYLRPLYDALYDLLGFDKTQKMFERQMIEIAPLAYMRGRTLNHAFIILDEAQ NTTPEQMKMFLTRIGFGSKAVITGDTTQIDLPRGQKSGLIEAQHVLRDVRGVSMTRFSSVDVVRHPLVARIVEAYDEFHA QHKDT
Specific function: Unknown
COG id: COG1702
COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoH family [H]
Homologues:
Organism=Escherichia coli, GI145693103, Length=313, Percent_Identity=57.1884984025559, Blast_Score=328, Evalue=4e-91, Organism=Escherichia coli, GI1787257, Length=253, Percent_Identity=43.0830039525692, Blast_Score=191, Evalue=6e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 36361; Mature: 36361
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKAKPHEFVAPRDDNARLQNLCGPLDENLRQIEQALDVSIIRRGHRLTVRGEQAAQAVA CCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHH ALELFYNQAREPLTVDDVQLGLIETRPLSERIPVEAPNGADESPVLHTRRTDLHGRTPAQ HHHHHHHHCCCCCEECCEEECEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHH REYLRSILSHDLSFGIGPAGTGKTYLAVACAVDALERDAVKRIVLTRPAVEAGERLGFLP HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCC GDLAQKVDPYLRPLYDALYDLLGFDKTQKMFERQMIEIAPLAYMRGRTLNHAFIILDEAQ CHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC NTTPEQMKMFLTRIGFGSKAVITGDTTQIDLPRGQKSGLIEAQHVLRDVRGVSMTRFSSV CCCHHHHHHHHHHHCCCCCEEEECCCEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHCCH DVVRHPLVARIVEAYDEFHAQHKDT HHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNKAKPHEFVAPRDDNARLQNLCGPLDENLRQIEQALDVSIIRRGHRLTVRGEQAAQAVA CCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHH ALELFYNQAREPLTVDDVQLGLIETRPLSERIPVEAPNGADESPVLHTRRTDLHGRTPAQ HHHHHHHHCCCCCEECCEEECEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHH REYLRSILSHDLSFGIGPAGTGKTYLAVACAVDALERDAVKRIVLTRPAVEAGERLGFLP HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCC GDLAQKVDPYLRPLYDALYDLLGFDKTQKMFERQMIEIAPLAYMRGRTLNHAFIILDEAQ CHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC NTTPEQMKMFLTRIGFGSKAVITGDTTQIDLPRGQKSGLIEAQHVLRDVRGVSMTRFSSV CCCHHHHHHHHHHHCCCCCEEEECCCEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHCCH DVVRHPLVARIVEAYDEFHAQHKDT HHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]