| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17545176
Identifier: 17545176
GI number: 17545176
Start: 488695
End: 489111
Strand: Direct
Name: 17545176
Synonym: RSc0457
Alternate gene names: NA
Gene position: 488695-489111 (Clockwise)
Preceding gene: 17545175
Following gene: 17545177
Centisome position: 13.15
GC content: 70.26
Gene sequence:
>417_bases ATGGCCGGACTCACCGCCGACACTCCGCAGCCGACCGGCATCACGGTGCACACGCAATCGCGCGTGCTCGAGATCGTCTT CGCCGACGGCAAGCAGTTCCGCCTGCCGTTCGAATACCTGCGCGTGCTGTCGCCGTCGGCCGAAGTGCAGGGGCATGGGC CGGGGCAGGAGGTGTTGCAGACCGGCAAGCGCGAGGTCGGCATCGTCGGCGTGGAGCCGGTCGGCAACTACGCGATCCGC CCGCTGTTCTCCGATGGCCATGATTCCGGCATCTACGACTGGGCCTATCTGTACCGCCTCGGCGCCGAGCAGGACGCGCT GTGGCAGGCCTATCTCGATCGCCTCGCCGCCGCGGGCCTCGACCGCGACGCACCGATGGCGCCCGGCGCCGGCCATGCCT GCGGCCACGGCCACTGA
Upstream 100 bases:
>100_bases GAGGGCGACGCACTGACTGCGGTAAGCTATCGCGTGGTGGAGGAGCCTGCGCACATGGCGCTGGCGGCTTCCTGATCCGC AATTCCCGAGACGTTTTTCC
Downstream 100 bases:
>100_bases TTCCGATTCACTCCGCGGCGCAGGCGCGCCGCATCGCAACCCCATTCCGTCATGAGCCAAACCCACTTCGGATTCCAGCA GGTCGACGAGCGCGAGAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MAGLTADTPQPTGITVHTQSRVLEIVFADGKQFRLPFEYLRVLSPSAEVQGHGPGQEVLQTGKREVGIVGVEPVGNYAIR PLFSDGHDSGIYDWAYLYRLGAEQDALWQAYLDRLAAAGLDRDAPMAPGAGHACGHGH
Sequences:
>Translated_138_residues MAGLTADTPQPTGITVHTQSRVLEIVFADGKQFRLPFEYLRVLSPSAEVQGHGPGQEVLQTGKREVGIVGVEPVGNYAIR PLFSDGHDSGIYDWAYLYRLGAEQDALWQAYLDRLAAAGLDRDAPMAPGAGHACGHGH >Mature_137_residues AGLTADTPQPTGITVHTQSRVLEIVFADGKQFRLPFEYLRVLSPSAEVQGHGPGQEVLQTGKREVGIVGVEPVGNYAIRP LFSDGHDSGIYDWAYLYRLGAEQDALWQAYLDRLAAAGLDRDAPMAPGAGHACGHGH
Specific function: Unknown
COG id: COG3536
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14840; Mature: 14709
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGLTADTPQPTGITVHTQSRVLEIVFADGKQFRLPFEYLRVLSPSAEVQGHGPGQEVLQ CCCCCCCCCCCCCEEEEECCCEEEEEECCCCEEECCHHHHHHHCCCCCCCCCCCCHHHHH TGKREVGIVGVEPVGNYAIRPLFSDGHDSGIYDWAYLYRLGAEQDALWQAYLDRLAAAGL CCCCCEEEEECCCCCCEEECEECCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCC DRDAPMAPGAGHACGHGH CCCCCCCCCCCCCCCCCC >Mature Secondary Structure AGLTADTPQPTGITVHTQSRVLEIVFADGKQFRLPFEYLRVLSPSAEVQGHGPGQEVLQ CCCCCCCCCCCCEEEEECCCEEEEEECCCCEEECCHHHHHHHCCCCCCCCCCCCHHHHH TGKREVGIVGVEPVGNYAIRPLFSDGHDSGIYDWAYLYRLGAEQDALWQAYLDRLAAAGL CCCCCEEEEECCCCCCEEECEECCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCC DRDAPMAPGAGHACGHGH CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA