| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17545163
Identifier: 17545163
GI number: 17545163
Start: 472764
End: 473192
Strand: Direct
Name: 17545163
Synonym: RSc0444
Alternate gene names: NA
Gene position: 472764-473192 (Clockwise)
Preceding gene: 17545162
Following gene: 17545164
Centisome position: 12.72
GC content: 69.46
Gene sequence:
>429_bases ATGCGATCCGACAACGCAGCAGGACTGGCGGCATGGCTGTGCGCATGCGGCCTCGCGGCATGGCCCGCGGCGATGGCAAT GGCGGCGGACGATGTCCCGGTCGCGGACGCGTCCTTGCAGCCCAGCGTGGAGGCGGCGCGTCCCCCGGTCGCCGCGGCCA CGGTGGTGCAGGGATTCGGCCAGGCGGTGGAGGCATCTGCGCTCGAAGGTTATCGCGGCGGGACGCAGCCGCTGTACCAG ACCGTCAACGACGCCAGGCTGTCCGGCACCGTGACGGACAACGCCGCCATCAACGTGGCGACGGGGGCGAACATCGTGCG CGACGGCTCCTTCGCCAATGCGAGCGGGATTCCCACGGTCATCCAGAACACCGGCGCGAACGTGCTGATCCAGAACGCCA CCATCGTCAACGTGCAGTTCCGGCCCTGA
Upstream 100 bases:
>100_bases GCCGGCGCGCGAGCAGTGAAGGCGGGCGCCGGCGGCGGAAGGTCGGGCCGGACCGCGGGCAAGCGGCCCGGCCCGGGTCG GAACGTGAAGGAGGCGCTCG
Downstream 100 bases:
>100_bases CCGCGCGACGGGGATGACGCCATGCGTGGGATGGGGTGGGCGACGCTGCTGGCGATGGCAGGGGCGCTGGCGCCGCTGAT GGTGCCGGCACCGGCGCGCG
Product: signal peptide protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MRSDNAAGLAAWLCACGLAAWPAAMAMAADDVPVADASLQPSVEAARPPVAAATVVQGFGQAVEASALEGYRGGTQPLYQ TVNDARLSGTVTDNAAINVATGANIVRDGSFANASGIPTVIQNTGANVLIQNATIVNVQFRP
Sequences:
>Translated_142_residues MRSDNAAGLAAWLCACGLAAWPAAMAMAADDVPVADASLQPSVEAARPPVAAATVVQGFGQAVEASALEGYRGGTQPLYQ TVNDARLSGTVTDNAAINVATGANIVRDGSFANASGIPTVIQNTGANVLIQNATIVNVQFRP >Mature_142_residues MRSDNAAGLAAWLCACGLAAWPAAMAMAADDVPVADASLQPSVEAARPPVAAATVVQGFGQAVEASALEGYRGGTQPLYQ TVNDARLSGTVTDNAAINVATGANIVRDGSFANASGIPTVIQNTGANVLIQNATIVNVQFRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14310; Mature: 14310
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSDNAAGLAAWLCACGLAAWPAAMAMAADDVPVADASLQPSVEAARPPVAAATVVQGFG CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHH QAVEASALEGYRGGTQPLYQTVNDARLSGTVTDNAAINVATGANIVRDGSFANASGIPTV HHHHHHHHCCCCCCCHHHHHHHCCCEECCEECCCCEEEEECCCCEEECCCCCCCCCCCHH IQNTGANVLIQNATIVNVQFRP EECCCCEEEEECCEEEEEEECC >Mature Secondary Structure MRSDNAAGLAAWLCACGLAAWPAAMAMAADDVPVADASLQPSVEAARPPVAAATVVQGFG CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHH QAVEASALEGYRGGTQPLYQTVNDARLSGTVTDNAAINVATGANIVRDGSFANASGIPTV HHHHHHHHCCCCCCCHHHHHHHCCCEECCEECCCCEEEEECCCCEEECCCCCCCCCCCHH IQNTGANVLIQNATIVNVQFRP EECCCCEEEEECCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA